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Volumn 22, Issue 14, 2006, Pages 1790-1791

TopoICE-R: 3D visualization modeling the topology of DNA recombination

Author keywords

[No Author keywords available]

Indexed keywords

DNA; DNA TOPOISOMERASE; RECOMBINASE;

EID: 33747879673     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btl164     Document Type: Conference Paper
Times cited : (22)

References (13)
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    • Bath,J. et al. (1999) Topology of Xer recombination on catenanes produced by lambda integrase. J. Mol. Biol., 289, 873-883.
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    • Bath, J.1
  • 2
    • 22544434073 scopus 로고    scopus 로고
    • Tangle solutions for a family of DNA-rearranging proteins
    • Buck,D. and Marcotte,C.V. (2005) Tangle solutions for a family of DNA-rearranging proteins. Math. Proc. Camb. Phil. Soc., 139, 59-80.
    • (2005) Math. Proc. Camb. Phil. Soc. , vol.139 , pp. 59-80
    • Buck, D.1    Marcotte, C.V.2
  • 3
    • 0030943173 scopus 로고    scopus 로고
    • Topological selectivity in Xer site-specific recombination
    • Colloms,S.D. et al. (1997) Topological selectivity in Xer site-specific recombination. Cell, 88, 855-864.
    • (1997) Cell , vol.88 , pp. 855-864
    • Colloms, S.D.1
  • 4
    • 0000868491 scopus 로고
    • Dehn surgery on knots
    • Culler,M. et al. (1987) Dehn surgery on knots. Ann. Math, 125, 237-300.
    • (1987) Ann. Math , vol.125 , pp. 237-300
    • Culler, M.1
  • 5
    • 0035627462 scopus 로고    scopus 로고
    • Biological distances on DNA knots and links: Applications to Xer recombination
    • Darcy,I. (2001) Biological distances on DNA knots and links: applications to Xer recombination. J. Knot Theor. Ramifications, 10, 269-294.
    • (2001) J. Knot Theor. Ramifications , vol.10 , pp. 269-294
    • Darcy, I.1
  • 6
    • 30444445119 scopus 로고    scopus 로고
    • Solving unoriented tangle equations involving 4-plats
    • Darcy,I. (2005) Solving unoriented tangle equations involving 4-plats. J. Knot Theor. Ramifications, 14, 993-1005.
    • (2005) J. Knot Theor. Ramifications , vol.14 , pp. 993-1005
    • Darcy, I.1
  • 8
    • 84972274704 scopus 로고
    • A calculus for rational tangles: Applications to DNA recombination
    • Ernst,C. and Sumners,D.W. (1990) A calculus for rational tangles: applications to DNA recombination. Math. Proc. Camb. Phil. Soc., 108, 489-515.
    • (1990) Math. Proc. Camb. Phil. Soc. , vol.108 , pp. 489-515
    • Ernst, C.1    Sumners, D.W.2
  • 9
    • 0030886293 scopus 로고    scopus 로고
    • Structure of Cre recombinase complexed with DNA in a sitespecific recombination synapse
    • Guo,F. et al. (1997) Structure of Cre recombinase complexed with DNA in a sitespecific recombination synapse. Nature, 389, 40-46.
    • (1997) Nature , vol.389 , pp. 40-46
    • Guo, F.1
  • 10
    • 0036330529 scopus 로고    scopus 로고
    • Tanglesolve: Topological analysis of site-specific recombination
    • Saka,Y. and Vazquez,M. (2002) Tanglesolve: Topological analysis of site-specific recombination. Bioinformatics, 18, 1011-1012.
    • (2002) Bioinformatics , vol.18 , pp. 1011-1012
    • Saka, Y.1    Vazquez, M.2
  • 11
    • 0003578872 scopus 로고    scopus 로고
    • Interactive topological drawing
    • PhD thesis, The University of British Columbia
    • Scharein,R.G. (1998) Interactive topological drawing. PhD thesis, The University of British Columbia.
    • (1998)
    • Scharein, R.G.1
  • 12
    • 2542521543 scopus 로고    scopus 로고
    • Tangle analysis of Gin site-specific recombination
    • Vazquez,M. and Sumners,D.W. (2004) Tangle analysis of Gin site-specific recombination. Math. Proc. Camb. Phil. Soc., 136, 565-582.
    • (2004) Math. Proc. Camb. Phil. Soc. , vol.136 , pp. 565-582
    • Vazquez, M.1    Sumners, D.W.2
  • 13
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    • Tangle analysis of Xer recombination reveals only three solutions, all consistent with a single three-dimensional topological pathway
    • Vazquez,M. et al. (2005) Tangle analysis of Xer recombination reveals only three solutions, all consistent with a single three-dimensional topological pathway. J. Mol. Biol., 346, 493-504.
    • (2005) J. Mol. Biol. , vol.346 , pp. 493-504
    • Vazquez, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.