Variations in abundance of 2 repetitive sequences in Leymus and Psathyrostachys species

Genome

Volumn 49, Issue 5, 2006, Pages 511-519

  Wang, R R C ^a   Zhang, J Y ^a,d   Lee, B S ^a,c   Jensen, K B ^a   Kishii, M ^b,e   Tsujimoto, H ^b  

^a USDA ARS Forage and Range Research Laboratory   (United States)

^b TOTTORI UNIVERSITY   (Japan)

^c Jeonju University   (South Korea)

^d PLANT BIOLOGY DIVISION   (United States)

^e INTERNATIONAL MAIZE AND WHEAT IMPROVEMENT CENTER CIMMYT   (Mexico)

Author keywords

350 bp family; FISH; Genome; pLrTaiI 1; Polyploid; STS PCR

Indexed keywords

LEYMUS; LEYMUS MOLLIS; LEYMUS RACEMOSUS; LEYMUS SECALINUS; PSATHYROSTACHYS; PSATHYROSTACHYS FRAGILIS; PSATHYROSTACHYS HUASHANICA; PSATHYROSTACHYS JUNCEA; PSATHYROSTACHYS LANUGINOSA;

EID: 33747832220     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/g05-126     Document Type: Article

References (32)

1. Anamthawat-Jónsson, K., and Bödvarsdóttir, S. 2001. Genomic and genetic relationships among species of Leymus (Poaceae: Triticeae) inferred from 18S-26S ribosomal genes. Am. J. Bot. 88: 553-559.
2. Anamthawat-Jónsson, K., Bragason, B.Th., Bodvarsdottir, S.K., and Koebner, R.M. 1999. Molecular variation in Leymus species and populations. Mol. Ecol. 8: 309-315.
3. Appels, R., Reddy, P., McIntyre, C.L., Moran, L.B., Frankel, O.H., and Clarke, B.C. 1989. The molecular-cytogenetic analysis of grasses and its application to studying relationships among species of the Triticeae. Genome, 31: 122-133.
4. Asay, K.H., Johnson, D.A., Jensen, K.B., Sarraj, W.M., and Clark, D.H. 1996. Potential of new tetraploid germplasm in Russian wildrye. J. Range Manag. 49: 439-442.
5. Balakirev, E.S., and Ayala, F.J. 2003. Pseudogenes: are they "junk" or functional DNA? Annu. Rev. Genet. 37: 123-151.
6. Belyayev, A., Raskina, O., and Nevo, E. 2005. Variability of the chromosomal distribution of Ty3-gypsy retrotransposons in the populations of two wild Triticeae species. Cytogenet. Genome Res. 109: 43-49.
7. Dewey, D.R. 1970. Genome relations among diploid Elymus junceus and certain tetraploid and octoploid Elymus species. Am. J. Bot. 57: 633-639.
8. Dewey, D.R. 1972. Genome analysis of hybrids between diploid Elymus junceus and five tetraploid Elymus species. Bot. Gaz. 133: 415-420.
9. Dewey, D.R. 1976. The genome constitution and phylogeny of Elymus ambiguus. Am. J. Bot. 63: 626-634.
10. Dewey, D.R. 1984. The genomic system of classification as a guide to intergeneric hybridization with the perennial Triticeae. In Gene manipulation in plant improvement. 16th Stadler Genetics Symposium 1984, Columbia, Mo. Edited by J.P. Gustafson. Plenum Publishing, New York, N.Y. pp. 209-279.
11. Doyle, J.J., and Doyle, J.L. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 19: 11-15.
12. Hole, D.J., Jensen, K.B., Wang, R.R.-C., and Clawson, S.M. 1999. Molecular marker analysis of Leymus flavescens and chromosome pairing in Leymus flavescens hybrids (Poaceae: Triticeae). Intl. J. Plant Sci. 160: 371-376.
13. Hsiao, C., Wang, R.R.-C., and Dewey, D.R. 1986. Karyotype analysis and genome relationships of 22 diploid species in the tribe Triticeae. Can. J. Genet. Cytol. 28: 109-120.
14. Hu, Z.-M., Wang, R.R.-C., Larson, S.R., Palazzo, A.J., Asay, K.H., and Chatterton, N.J. 2001. Selection response of molecular markers associated with anthocyanin coloration and low-temperature growth traits in crested wheatgrass. Can. J. Plant Sci. 81: 665-671.
15. Jensen, K.B., and Wang, R.R.-C. 1997. Cytological and molecular evidence for transferring Elymus coreanus and Elymus californicus from the genus Elymus to Leymus (Poaceae: Triticeae). Int. J. Plant Sci. 158: 872-877.
16. Jensen, K.B., Zhang, Y.F., and Dewey, D.R. 1990. Mode of pollination of species in genomically defined genera of the perennial Triticeae. Can. J. Plant Sci. 70: 215-225.
17. King, G.J. 2002. Through a genome, darkly: comparative analysis of plant chromosomal DNA. Plant Mol. Biol. 48(1-2): 5-20.
18. Kishii, M., and Tsujimoto, H. 2002. Genus-specific localization of the TaiI family of tandem-repetitive sequences in either the centromeric or subtelomeric regions in Triticeae species (Poaceae) and its evolution in wheat. Genome, 45: 946-955.
19. Kishii, M., Nagaki, K., Tsujimoto, H., and Sasakuma, T. 1999. Exclusive localization of tandem repetitive sequences in subtelomeric heterochromatin regions of Leymus racemosus (Poaceae, Triticeae). Chromosome Res. 7: 519-529.
20. Kishii, M., Wang, R.R.-C., and Tsujimoto, H. 2003. Characteristics and behaviour of the chromosomes of Leymus mollis and L. racemosus (Triticeae, Poaceae) during mitosis and meiosis. Chromosome Res. 11: 741-748.
21. Lapitan, N.L.V. 1992. Organization and evolution of higher plant nuclear genomes. Genome, 35: 171-181.
22. Linde-Laursen, I., and Baden, C. 1994a. Giemsa C-banded karyotypes of two cytotypes (2x, 4x) of Psathyrostachys lanuginosa (Poaceae; Triticeae). Hereditas, 120: 113-120.
23. Linde-Laursen, I., and Baden, C. 1994b. Comparison of the Giemsa C-banded karyotypes of the 3 subspecies of Psathyrostachys fragilis, subspp.villosus (2x), secaliformis (2x, 4x), and fragilis (2x) (Poaceae), with notes on chromosome pairing. Plant Syst. Evol. 191: 183-198.
24. Lippman, Z., Gendrel, A., Black, M., Vaughn, M.W., Dedhla, N., McComble, W.R., et al. 2004. Role of transposable elements in heterochromatin and epigenetic control. Nature (London), 430: 471-477.
25. Löve, Á. 1984. Conspectus of the Triticeae. Feddes Rep. 95: 425-521.
26. 1 hybrids and amphidiploids. In Otdalen. Gibridiz. i. Poliploidiya. Nauk, Moscow, USSR. pp. 158-176.
27. Sun, M., Chen, H., and Leung, F.C. 1999. Low-Cot DNA sequences for fingerprinting analysis of germplasm diversity and relationships in Amaranthus. Theor. Appl. Genet. 99: 464-472.
28. Svitashev, S., Bryngelssonl, T., Li, X.-M., and Wang, R.R.-C. 1998. Genome specific repetitive DNA and RAPD markers for genome identification in Elymus and Hordelymus. Genome, 41: 120-128.
29. Wang, R.R.-C., and Hsiao, C. 1984. Morphology and cytology of interspecific hybrids of Leymus mollis. J. Hered. 75: 488-492.
30. Wang, R.R.-C., and Jensen, K.B. 1994. Absence of the J genome in Leymus species (Poaceae: Triticeae): evidence from DNA hybridization and meiotic pairing. Genome, 37: 231-235.
31. Wang, R.R.-C., von Bothmer, R., Dvořák, J., Fedak, G., Linde-Laursen, I., and Muramatsu, M. 1994. Genome symbols in the Triticeae (Poaceae). In Proceedings of the 2nd International Triticeae Symposium, 20-24 June 1994, Logan, Utah. Edited by R.R.-C. Wang, K.B. Jensen, and C. Jaussi. Utah State University Press, Logan, Utah. pp. 29-34.
32. Zhang, H.B., and Dvořák, J. 1991. The genome origin of tetraploid species of Leymus species (Poaceae: Triticeae) inferred from variation in repeated nucleotide sequences. Am. J. Bot. 78: 871-884.