Mitochondrial sequence data expose the putative cosmopolitan polychaete Scoloplos armiger (Annelida, Orbiniidae) as a species complex

BMC Evolutionary Biology

Volumn 6, Issue , 2006, Pages

  Bleidorn, Christoph ^a,b   Kruse, Inken ^c   Albrecht, Sylvia ^a,d   Bartolomaeus, Thomas ^a  

^a FREIE UNIVERSITÄT BERLIN   (Germany)

^b UNIVERSITY OF POTSDAM   (Germany)

^c SMITHSONIAN MARINE STATION   (United States)

^d LEIBNIZ INSTITUTE FOR ZOO AND WILDLIFE RESEARCH   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

AMPLIFIED FRAGMENT LENGTH POLYMORPHISM; ANNELID WORM; ARTICLE; COMMUNITY ECOLOGY; CONTROLLED STUDY; GENE SEQUENCE; MITOCHONDRIAL GENETICS; NONHUMAN; PACIFIC OCEAN; PHYLOGENY; RANDOM AMPLIFIED POLYMORPHIC DNA; SCOLOPLOS ARMIGER; SPECIES DIFFERENTIATION; SPECIES IDENTIFICATION; ANIMAL; ATLANTIC OCEAN; CLASSIFICATION; DNA BASE COMPOSITION; ECOSYSTEM; GENETICS; GENOME; HAPLOTYPE; MITOCHONDRIAL GENE; POLYCHAETA; SEQUENCE ALIGNMENT; TEMPERATURE;

ANNELIDA; ORBINIIDAE; POLYCHAETA; SCOLOPLOS ARMIGER;

MITOCHONDRIAL DNA;

ANIMALS; ATLANTIC OCEAN; BASE COMPOSITION; DNA, MITOCHONDRIAL; ECOSYSTEM; GENES, MITOCHONDRIAL; GENOME; HAPLOTYPES; PACIFIC OCEAN; PHYLOGENY; POLYCHAETA; SEQUENCE ALIGNMENT; TEMPERATURE;

EID: 33747690431     PISSN: 14712148     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-6-47     Document Type: Article

References (57)

1. Holte B: The macrofauna and main functional interactions in the sill basin sediments of he pristine Holandsfjord, Northern Norway, with autecological reviews for some species. Sarsia 1998, 83:55-68.
2. Carvalho S, Ravara A, Quintino V, Rodrigues AM: Macrobenthic community characterisation of an estuary from the western coast of Portugal (Sado estuary) prior to dredging operations. Bol Inst Esp Oceanogr 2001, 17:179-190.
3. Belan T: Benthos abundance pattern and species composition in conditions of pollution in Amursky Bay (the Peter the Great Bay, the Sea of Japan). Mar Poll Bull 2003, 46:1111-1119.
4. Koie M: The life-cycle of the flatfish nematode Cucullanus heterochrous. J Helminthol 2000, 74:323-328.
5. van der Meer J, Beukema JJ, Dekker R: Population dynamics of two marine polychaetes: the relative role of density dependence, predation, and winter conditions. ICES J Mar Sci 2000, 57:1488-1494.
6. Hartmann-Schröder G: Polychaeta Stuttgart: G. Fischer; 1996.
7. Kruse I: Population ecology and genetics of the polychaete Scoloplos armiger (Orbiniidae). Ber Pol Meeresforsch 2003, 438:1-95.
8. Gibbs PE: Observations on the population of Scoloplos armiger at Whitstable. J Mar Biol Ass UK 1968, 48:225-254.
9. Holte B, Gulliksen B: Common macrofauna dominant species in the sediments of some north Norwegian and Svalbard glacial fjords. Polar Biol 1998, 19:375-382.
10. Plate S, Husemann E: An alternative mode of larval development in Scoloplos armiger (O. F. Müller, 1776) (Polychaeta, Orbiniidae). Helgol Meeresunters 1991, 45:487-492.
11. Grassle JF, Grassle JP: Sibling species in the marine pollution indicator Capitella (Polychaeta). Science 1976, 12:567-569.
12. Knowlton N: Sibling species in the sea. Ann Rev Ecol Syst 1993, 24:189-216.
13. Williams SJ: The status of Terebellides stroemi (Polychaeta, Trichobranchidae) as a cosmopolitan species on a worldwide morphological survey, including description of a new species. In Proceedings of 1st international polychaete conference Volume 984. Edited by: Hutchings PA. Linn Soc NSW, Sydney :118-142.
14. Hutchings PA, Glasby CJ: Phylogenetic implications of the biogeography of Australian Terebellidae (Polychaetea). Ophelia 1991, Suppl 5:565-572.
15. Dauvin JC, Thiebaut E: Is Owenia fusiformis Delle Chiaje a cosmopolitan species? Actes Mem Mus Natn Hist Nat 1994, 162:383-404.
16. Allen FE: Distribution of marine invertebrates by ships. Austr J Mar Freshwat Res 1953, 4:307-316.
17. Knowlton N: Molecular genetic analyses of species boundaries in the sea. In Marine Genetics Edited by: Thorpe JP. Dordrecht: Kluwer Academic Publishing; 2000:73-90.
18. Thorpe JP, Sole'-Cava AM: The use of allozyme electrophoresis in invertebrate systematics. Zool Scripta 1994, 23:3-18.
19. Klautau M, Russo CAM, Lazoski C, Boury-Esnault N, Thorpe JP, Solé-Cava AM: Does cosmopolitanism result from overconservative systematics? A case study using the marine sponge Chondrilla nucula. Evolution 1999, 53:1414-1422.
20. Day JH: A monograph on the Polychaeta of Southern Africa London: Trustees of the British Museum (Natural History); 1967.
21. Glasby CJ, Alvarez B: Distribution patterns and biogeographic analysis of Austral Polychaeta (Annelida). J Biogeogr 1999, 26:507-533.
22. Fiege D, Bütfering B: SEM-investigations on the morphology and anatomy of Sternaspis scutata (Ranzani, 1817) (Annelida: Polychaeta). Bull Mar Sci 2000, 67:662-663.
23. Koh BS, Bhaud M: Description of Owenia gomsoni N. SP. (Oweniidae, Annelida Polychaeta) from the Yellow Sea and evidence that Owenia fusiformis is not a cosmopolitan species. Vie et Milieu 2001, 51:77-86.
24. Westheide W, Haß-Cordes E, Krabusch M, Müller M: Ctenodrilus serratus (Polychaeta: Ctenodrilidae) is a truly amphi-atlantic meiofauna species - evidence from molecular data. Mar Biol 2003, 142:637-642.
25. Soosten C, Schmidt H, Westheide W: Genetic variability and relationships among geographically widely separated populations of Petitia amphophthalma (Polychaeta: Syllidae). Results from RAPD-PCR investigations. Mar Biol 1998, 131:659-669.
26. Westheide W, Hass-Cordes E: Molecular taxonomy: description of a cryptic Petitia species (Polychaeta: Syllidae) from the island of Mahé (Seychelles, Indian Ocean) using RAPD markers and ITS2 sequences. J Zool Syst Evol Res 2001, 39:103-111.
27. Patti FP, Gambi MC: Phylogeography of the invasive polychaete Sabella spallanzanii (Sabellidae) based on the nucleotide sequence of internal transcribed spacer 2 (ITS2) of nuclear rDNA. Mar Ecol Prog Ser 2001, 215:169-177.
28. Schmidt H, Westheide W: Are the meiofaunal polychaetes Hesionides arenaria and Stygocapitella subterranea true cosmopolitan species? - results of RAPD-PCR investigations. Zool Scr 2000, 29:17-27.
29. Schmidt H, Westheide W: Genetic relationships (RAPD-PCR) between geographically separated populations of the "cosmopolitan" interstitial polychaete Hesionides gohari (Hesionidae) and the evolutionary origin of the freshwater species Hesionides riegerorum. Biol Bull 1999, 196:216-226.
30. Avise JC: Phylogeography Cambridge: Cambridge University Press; 2000.
31. Baker HR: Diversity and zoogeography of marine Tubuficidae (Annelida, Oligochaeta) with notes on variation in widespread species. Hydrobiologia 1984, 115:191-196.
32. Kruse I, Reusch TBH, Schneider MV: Sibling species or poecilogeny in the polychaete Scoloplos armiger ? Mar Biol 2003, 142:937-947.
33. Kruse I, Reise K: Reproductive isolation between intertidal and subtidal Scoloplos armiger (Polychaeta, Orbiniidae) indicates sibling species in the North Sea. Mar Biol 2003, 143:511-517.
34. Kruse I, Strasser M, Thiermann F: The role of ecological divergence in speciation between intertidal and subtidal Scoloplos armiger (Polychaeta, Orbiniidae). J Sea Res 2004, 51:53-62.
35. Bleidorn C, Podsiadlowski L, Bartolomaeus T: The complete mitochondrial genome of the orbiniid polychaete Orbinia latreillii (Annelida, Orbiniidae) - a novel gene order for Annelida and implications for annelid phylogeny. Gene 2006, 370:96-103.
36. Boore JL: Animal mitochondrial genomes. Nucleic Acids Res 1999, 27:1767-1780.
37. Jennings RM, Halanych KM: Mitochondrial genomes of Clymenella torquata (Maldanidae) and Riftia pachyptila (Siboglinidae). Evidence for conserved gene order in Annelida. Mol Biol Evol 2005, 22:210-222.
38. Mishler BD, Theriot EC: The phylogenetic species concept (sensu Mishler and Theriot): Monophyly, apomorphy, and phylogenetic species concepts. In Species concepts and phylogenetic theory. A debate Edited by: Wheeler QD, Meier R. Columbia University Press, New York; 2000:44-54.
39. Avise JC, Shapira JF, Daniel SW, Aquadro CF, Lansman RA: Mitochondrial DNA differentiation during the speciation process in Peromyscus. Mol Biol Evol 1983, 1:38-56.
40. Albrecht S: Vergleichende Morphologie eu- und sublitoraler Polychaeten der Gattung Scoloplos in der Nordsee. Diploma thesis, Philipps University Marburg 2004.
41. Giangrande A: Polychaete reproductive patterns, life cycles and life histories: an overview. Oceanograph Mar Biol Ann Rev 1997, 35:323-386.
42. Bleidorn C: Phylogenetic relationships and evolution of Orbiniidae (Annelida, Polychaeta) based on molecular data. Zool J Linn Soc 2005, 144:59-73.
43. Beesley PL, Ross GJB, Glasby CJ: Polychaetes and Allies: The southern Synthesis. Fauna of Australia. Vol. 4A: Polychaeta, Myzostomida, Pogonophora, Echiura, Sipuncula Melbourne: CSIRO Publishing; 2000.
44. Day JH: A review of the Australian and New Zealand Orbiniidae. In In memory of Dr. Olga Hartman. Essays on polychaetous annelids Edited by: Reish DJ, Fauchald K. Los Angeles: Allan Hancock Foundation Special Publication; 1977:217-246.
45. Bensasson D, Zhang DX, Hartl DL, Hewitt GM: Mitochondrial pseudogenes: evolution's misplaced witnesses. Trends Ecol Evol 2001, 16:314-321.
46. Blake JA: Family Orbiniidae Hartman, 1942. In Taxonomic Atlas of the Benthic Fauna of the Santa Maria Basin and Western Santa Barbara Channel, The Annelida, Part 3: Polychaeta: Orbiniidae to Cossuridae Volume 6. Edited by: Blake JA, Hilbig B, Scott PH. Santa Barbara Museum of Natural History, Santa Barbara, CA; 1996:1-26.
47. Hartman O: Atlas of the sedentariate polychaetous annelids from California Los Angeles: Allan Hancock Foundation, University of Southern California; 1969.
48. Wyman SK, Jansen RK, Boore JL: Automatic annotation of organellar genomes with DOGMA. Bioinformatics 2004, 20:3252-3255.
49. Lowe TM, Eddy SR: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res 1997, 25:955-964.
50. Thompson JD, Higgins DG, Gibson TJ: CLUSTAL W: improving the sensivity of progressive multiple sequence alignment through sequence weighting, positionspecific gap penalties and weight matrix choice. Nucleic Acids Res 1994, 22:4673-4680.
51. TreeBase [http://www.treebase.org]
52. Swofford DL: PAUP*. Phylogenetic analysis using parsimony, version 4.0b8 Sinauer, Sunderland, MA; 2001.
53. Huelsenbeck JP, Ronquist FR: MrBayes: Bayesian inference of phylogeny. Bioinformatics 2001, 17:754-755.
54. Posada D, Buckley TR: Model selection and model averaging in phylogenetics: advantages of Akaike Information criterion and Bayesian approaches over likelihood ratio tests. Syst Biol 2004, 53:793-808.
55. Posada D, Crandall KA: Modeltest: testing the model of DNA substitution. Bioinformatics 1998, 14:917-918.
56. Posada D, Crandall KA: Selecting the best-fit model of nucleotid substitution. Syst Biol 2001, 50:580-601.
57. Kumar S, Tamura K, Jakobsen IB, Nei M: MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 2001, 17:1244-1245.