Evaluation of whole-genome amplification of low-copy-number DNA in chimerism analysis after allogeneic stem cell transplantation using STR marker typing

Electrophoresis

Volumn 27, Issue 15, 2006, Pages 3028-3037

  Nagy, Marion ^a   Rascon, Jelena ^a   Massenkeil, Gero ^a   Ebell, Wolfram ^a   Roewer, Lutz ^a  

^a CHARITÉ UNIVERSITÄTSMEDIZIN BERLIN   (Germany)

Author keywords

Chimerism analysis; Low copy cell regions; Short tandem repeat analysis; Whole genome amplification

Indexed keywords

CELL CULTURE; CELL PROLIFERATION; DNA SEQUENCES; DROPS; GENES; POLYMERASE CHAIN REACTION; QUALITY CONTROL; STEM CELLS;

CHIMERISM ANALYSE; COPY NUMBER; DNA AMPLIFICATION; DROP-OUT; LOW-COPY CELL REGION; REPEAT ANALYSIS; SHORT TANDEM REPEAT ANALYSE; SHORT TANDEM REPEATS; STEM CELL TRANSPLANTATION; WHOLE GENOME AMPLIFICATIONS;

DNA;

CD34 ANTIGEN; GENOMIC DNA;

ACCURACY; ALLELE; ALLOGENEIC STEM CELL TRANSPLANTATION; ANALYTICAL ERROR; ARTICLE; CD34 SELECTION; CELL COUNT; CELL POPULATION; CELL SEPARATION; CHIMERA; CONTROLLED STUDY; DNA DETERMINATION; DNA EXTRACTION; DNA FINGERPRINTING; DNA TEMPLATE; GENE AMPLIFICATION; GENE LOCUS; GENETIC ANALYSIS; HUMAN; HUMAN CELL; MULTIPLEX POLYMERASE CHAIN REACTION; QUALITY CONTROL; REPRODUCIBILITY; SHORT TANDEM REPEAT;

EID: 33747658354     PISSN: 01730835     EISSN: 15222683     Source Type: Journal    
DOI: 10.1002/elps.200500813     Document Type: Article

References (14)

1. Dean, F. B., Nelson, J. R., Giesler, T. L., Lasken, R. S., Genome Res. 2001, 11, 1095-1099.
2. Paez, J. G., Lin, M., Beroukhim, R., Lee, J. C. et al., Nucleic Acids Res. 2004, 32, 71-75.
3. Tzvetkov, M. V., Becker, C., Kulle, B., Nürnberg, P. et al., Electrophoresis 2005, 26, 710-715.
4. Lasken, R. S., Engholm, M., Trends Biotechnol. 2003, 21, 531-535.
5. Zhang, L., Cui, X., Schmitt, K., Hubert, R. et al., Proc. Natl. Acad. Sci. USA 1992, 89, 5847-5841.
6. Dietmaier, W., Hartmann, A., Wallinger, S., Heinmoller, E. et al., Am. J. Pathol. 1999, 154, 83-95.
7. Nagy, M., Otremba, P., Krüger, C., Bergner-Greiner, S. et al., Forensic Sci. Int. 2005, 152, 13-22.
8. Gill, P., Sparkes, R., Pinchin, R., Clayton, T. et al., Forensic Sci. Int. 1998, 91, 41-53.
9. Massenkeil, G., Nagy, M., Lawang, M., Rosen, O. et al., Bone Marrow Transplant. 2003, 31, 339-345.
10. Subklewe, M., Nagy, M., Schoch, C., Jenisch, S. et al., Leukemia 2004, 18, 2050-2053.
11. Thiede, C., Florek, M., Bornhauser, M., Ritter, M. et al., Bone Marrow Transplant. 1999, 23, 1055-1060.
12. Gill, P., Curran, J., Elliot, K., Nucleic Acids Res. 2005, 33, 632-643.
13. Rook, M. S., Delach, S. M., Deyneko, G., Worlock, A. et al., Am. J. Pathol. 2004, 164, 23-33.
14. Wang, G., Maher, E., Brennan, C., Chin, L. et al., Genome Res. 2004, 14, 2357-2366.