Novel primers developed from mitochondrial intergenic spacers are useful for multi-locus sequence typing of Fusarium oxysporum strains

European Journal of Plant Pathology

Volumn 116, Issue 1, 2006, Pages 77-80

  Cunnington, James ^a  

^a DEPARTMENT OF PRIMARY INDUSTRIES   (Australia)

Author keywords

Fusarium wilt; Sequence diversity

Indexed keywords

CROP PLANT; DISEASE SPREAD; FUNGUS; GENE; RNA;

FUSARIUM OXYSPORUM;

EID: 33747627144     PISSN: 09291873     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10658-006-9022-7     Document Type: Article

References (11)

1. Baayen RP, O'Donnell K, Waalwijk C, Bonants PJM, Cigelnik E, Kroon PNM and Roebroeck EJA (2000) Gene genealogies and AFLP analyses within the Fusarium oxysporum complex identify monophyletic and non-monophyletic formae speciales causing wilt and rot disease. Phytopathology 90: 891-900.
2. Bruns TD, White TJ and Taylor JW (1991) Fungal molecular systematics. Annual Review of Ecology and Systematics 22: 525-564.
3. Chambergo FS, Bonaccorsi ED, Ferreira AJS, Ramos ASP, Ferreira JR Jr, Abrahaõ-Neto J, Simon Farah JP and El-Dorry H (2002) Elucidation of the metabolic fate of glucose in the filamentous fungus Trichoderma reesei using expressed sequence tag (EST) analysis and cDNA microarrays. Journal of Biological Chemistry 277: 13983-13988.
4. Gordon TR and Martyn RD (1997) The evolutionary biology of Fusarium oxysporum. Annual Review of Phytopathology 35: 111-128.
5. Jacobson DJ and Gordon TR (1990) The variability of mitochondrial DNA as an indicator of the relationships between populations of Fusarium oxysporum f. sp. melonis. Mycological Research 94: 734-744.
6. Kistler HC (2001) Evolution of host specificity in Fusarium oxysporum. In: Summerell BA, Leslie JF, Backhouse D, Bryden WL and Burgess LW (eds.) Fusarium. Paul E. Nelson Memorial Symposium (pp. 70-82) APS Press, Minnesota.
7. Kouvelis VN, Ghikas DM and Typas MA (2004) The analysis of the complete mitochondrial genomes of Lecanicillium muscarium (synonym Verticillium lecanii) suggests a minimum common gene organisation in mtDNAs of Sordariomycetes: Phylogenetic implications. Fungal Genetics and Biology 41: 930-940.
8. O'Donnell K, Kistler HC, Cigelnik E and Ploetz RC (1998) Multiple evolutionary origins of the fungus causing Panama disease of banana: Concordant evidence from nuclear and mitochondrial gene genealogies. Proceedings of the National Academy of Sciences, USA 95: 2044-2049.
9. O'Donnell K, Sutton DA, Rinaldi MG, Magnon KC, Cox PA, Revankar SG, Sanche S, Geiser DM, Juba JH, vanBurik JAH, Padhye A, Anaissie EJ, Francesconi A, Walsh TJ and Robinson JS (2004) Genetic diversity of human pathogenic members of the Fusarium oxysporum complex inferred from multilocus DNA sequence data and amplified fragment length polymorphism analyses: Evidence for the recent dispersion of a geographically widespread clonal lineage and nosocomial origin. Journal of Clinical Microbiology 42: 5109-5120.
10. Wattier RAM, Gathercole LL, Assinder SJ, Gliddon CJ, Deahl KL, Shaw DS and Mills DI (2003) Sequence variation of intergenic mitochondrial DNA spacers (mtDNA-IGS) of Phytophthora infestans (Oomycetes) and related species. Molecular Ecology Notes 3: 136-138.
11. White TJ, Bruns TD, Lee S and Taylor JW (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ and White TJ (eds.) PCR Protocols: A Guide to Methods and Applications (pp. 315-322) Academic Press, New York.