메뉴 건너뛰기




Volumn 120, Issue 5, 2006, Pages 310-314

Application of a quasi-median network analysis for the visualization of character conflicts to a population sample of mitochondrial DNA control region sequences from southern Germany (Ulm)

Author keywords

Forensic; Haplogroups assignment; mtDNA polymorphisms; Phylogenetic analyses; West Eurasian population

Indexed keywords

MITOCHONDRIAL DNA;

EID: 33747371721     PISSN: 09379827     EISSN: 14371596     Source Type: Journal    
DOI: 10.1007/s00414-006-0114-x     Document Type: Article
Times cited : (27)

References (40)
  • 1
    • 0031970150 scopus 로고    scopus 로고
    • Population data for 101 Austrian Caucasian mitochondrial DNA d-loop sequences: Application of mtDNA sequence analysis to a forensic case
    • Parson W, Parsons TJ, Scheithauer R, Holland MM (1998) Population data for 101 Austrian Caucasian mitochondrial DNA d-loop sequences: application of mtDNA sequence analysis to a forensic case. Int J Legal Med 111:124-132
    • (1998) Int J Legal Med , vol.111 , pp. 124-132
    • Parson, W.1    Parsons, T.J.2    Scheithauer, R.3    Holland, M.M.4
  • 2
    • 0036919881 scopus 로고    scopus 로고
    • A new database of mitochondrial DNA hypervariable regions I and II sequences from 162 Japanese individuals
    • Imaizumi K, Parsons TJ, Yoshino M, Holland MM (2002) A new database of mitochondrial DNA hypervariable regions I and II sequences from 162 Japanese individuals. Int J Legal Med 116:68-73
    • (2002) Int J Legal Med , vol.116 , pp. 68-73
    • Imaizumi, K.1    Parsons, T.J.2    Yoshino, M.3    Holland, M.M.4
  • 3
    • 18744401089 scopus 로고    scopus 로고
    • A new database of mitochondrial DNA hypervariable regions I and II sequences from 162 Japanese individuals (vol 116, p 68, 2001)
    • Imaizumi K, Parsons TJ (2005) A new database of mitochondrial DNA hypervariable regions I and II sequences from 162 Japanese individuals (vol 116, p 68, 2001). Int J Legal Med 119:183
    • (2005) Int J Legal Med , vol.119 , pp. 183
    • Imaizumi, K.1    Parsons, T.J.2
  • 4
    • 0031910489 scopus 로고    scopus 로고
    • Location and frequency of polymorphic positions in the mtDNA control region of individuals from Germany
    • Errata in Int J Legal Med 111 (1998) 286 and Int J Legal Med 112 (1999) 145-150
    • Lutz S, Weisser H-J, Heizmann J, Pollak S (1998) Location and frequency of polymorphic positions in the mtDNA control region of individuals from Germany. Int J Legal Med 111:67-77. Errata in Int J Legal Med 111 (1998) 286 and Int J Legal Med 112 (1999) 145-150
    • (1998) Int J Legal Med , vol.111 , pp. 67-77
    • Lutz, S.1    Weisser, H.-J.2    Heizmann, J.3    Pollak, S.4
  • 5
    • 6344272221 scopus 로고    scopus 로고
    • Mitochondrial DNA control region sequences from Nairobi (Kenya): Inferring phylogenetic parameters for the establishment of a forensic database
    • Brandstätter A, Peterson CT, Irwin JA et al (2004) Mitochondrial DNA control region sequences from Nairobi (Kenya): inferring phylogenetic parameters for the establishment of a forensic database. Int J Legal Med 118:294-306
    • (2004) Int J Legal Med , vol.118 , pp. 294-306
    • Brandstätter, A.1    Peterson, C.T.2    Irwin, J.A.3
  • 6
    • 1542314426 scopus 로고    scopus 로고
    • Mitochondrial DNA D-loop hypervariable regions: Czech population data
    • Vanecek T, Vorel F, Sip M (2004) Mitochondrial DNA D-loop hypervariable regions: Czech population data. Int J Legal Med 118:14-18
    • (2004) Int J Legal Med , vol.118 , pp. 14-18
    • Vanecek, T.1    Vorel, F.2    Sip, M.3
  • 7
    • 33747353327 scopus 로고    scopus 로고
    • Generating population data for the EMPOP database - An overview of the mtDNA sequencing and data evaluation processes considering 273 Austrian control region sequences as example
    • in press
    • Brandstätter A, Niederstätter H, Pavlic M et al (2006) Generating population data for the EMPOP database - an overview of the mtDNA sequencing and data evaluation processes considering 273 Austrian control region sequences as example. Forensic Sci Int (in press)
    • (2006) Forensic Sci Int
    • Brandstätter, A.1    Niederstätter, H.2    Pavlic, M.3
  • 8
    • 10744221812 scopus 로고    scopus 로고
    • The EDNAP mitochondrial DNA population database (EMPOP) collaborative exercises: Organisation, results and perspectives
    • Parson W, Brandstätter A, Alonso A et al (2004) The EDNAP mitochondrial DNA population database (EMPOP) collaborative exercises: organisation, results and perspectives. Forensic Sci Int 139:215-226
    • (2004) Forensic Sci Int , vol.139 , pp. 215-226
    • Parson, W.1    Brandstätter, A.2    Alonso, A.3
  • 9
    • 19944426519 scopus 로고    scopus 로고
    • Mitochondrial DNA error prophylaxis: Assessing the causes of errors in the GEP'02-03 proficiency testing trial
    • Salas A, Prieto L, Montesino M et al (2005) Mitochondrial DNA error prophylaxis: assessing the causes of errors in the GEP'02-03 proficiency testing trial. Forensic Sci Int 148:191-198
    • (2005) Forensic Sci Int , vol.148 , pp. 191-198
    • Salas, A.1    Prieto, L.2    Montesino, M.3
  • 12
    • 84976496722 scopus 로고    scopus 로고
    • EMPOP - The EDNAP mtDNA population database concept for a new generation, high-quality mtDNA database
    • Parson W, Brandstätter A, Pircher M et al (2004) EMPOP - the EDNAP mtDNA population database concept for a new generation, high-quality mtDNA database. Int Congress Series 1261:106-108
    • (2004) Int Congress Series , vol.1261 , pp. 106-108
    • Parson, W.1    Brandstätter, A.2    Pircher, M.3
  • 13
    • 0032900678 scopus 로고    scopus 로고
    • Median-joining networks for inferring intraspecific phylogenies
    • Bandelt H-J, Forster P, Röhl A (1999) Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol 16:37-48
    • (1999) Mol Biol Evol , vol.16 , pp. 37-48
    • Bandelt, H.-J.1    Forster, P.2    Röhl, A.3
  • 14
    • 0033928911 scopus 로고    scopus 로고
    • Median networks: Speedy construction and greedy reduction, one simulation, and two case studies from human mtDNA
    • Bandelt H-J, Macaulay V, Richards M (2000) Median networks: speedy construction and greedy reduction, one simulation, and two case studies from human mtDNA. Mol Phylogenet Evol 16:8-28
    • (2000) Mol Phylogenet Evol , vol.16 , pp. 8-28
    • Bandelt, H.-J.1    Macaulay, V.2    Richards, M.3
  • 15
    • 0030695903 scopus 로고    scopus 로고
    • Austrian Caucasian population data for the quadruplex plus amelogenin: Refined mutation rate for HumvWFA31/A
    • Ambach E, Parson W, Niederstätter H, Budowle B (1997) Austrian Caucasian population data for the quadruplex plus amelogenin: refined mutation rate for HumvWFA31/A. J Forensic Sci 42:1136-1139
    • (1997) J Forensic Sci , vol.42 , pp. 1136-1139
    • Ambach, E.1    Parson, W.2    Niederstätter, H.3    Budowle, B.4
  • 16
    • 0019423856 scopus 로고
    • Sequence and organization of the human mitochondrial genome
    • Anderson S, Bankier AT, Barrell BG et al (1981) Sequence and organization of the human mitochondrial genome. Nature 290:457-465
    • (1981) Nature , vol.290 , pp. 457-465
    • Anderson, S.1    Bankier, A.T.2    Barrell, B.G.3
  • 17
    • 0032868141 scopus 로고    scopus 로고
    • Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA
    • Andrews RM, Kubacka I, Chinnery PF et al (1999) Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA. Nat Genet 23:147
    • (1999) Nat Genet , vol.23 , pp. 147
    • Andrews, R.M.1    Kubacka, I.2    Chinnery, P.F.3
  • 18
    • 0342323789 scopus 로고    scopus 로고
    • DNA Commission of the International Society for Forensic Genetics: Guidelines for mitochondrial DNA typing
    • Bär W, Brinkmann B, Budowle B et al (2000) DNA Commission of the International Society for Forensic Genetics: guidelines for mitochondrial DNA typing. Int J Legal Med 113:193-196
    • (2000) Int J Legal Med , vol.113 , pp. 193-196
    • Bär, W.1    Brinkmann, B.2    Budowle, B.3
  • 19
    • 0343091513 scopus 로고    scopus 로고
    • DNA Commission of the International Society for Forensic Genetics: Guidelines for mitochondrial DNA typing
    • Carracedo A, Bär W, Lincoln P et al (2000) DNA Commission of the International Society for Forensic Genetics: guidelines for mitochondrial DNA typing. Forensic Sci Int 110:79-85
    • (2000) Forensic Sci Int , vol.110 , pp. 79-85
    • Carracedo, A.1    Bär, W.2    Lincoln, P.3
  • 20
    • 0034958136 scopus 로고    scopus 로고
    • Automation and high throughput for a DNA database laboratory: Development of a laboratory information management system
    • Steinlechner M, Parson W (2001) Automation and high throughput for a DNA database laboratory: development of a laboratory information management system. Croat Med J 42:252-255
    • (2001) Croat Med J , vol.42 , pp. 252-255
    • Steinlechner, M.1    Parson, W.2
  • 21
    • 0033941403 scopus 로고    scopus 로고
    • mtDNA and the origin of the Icelanders: Deciphering signals of recent population history
    • Helgason A, Sigureth aS, Gulcher JR et al (2000) mtDNA and the origin of the Icelanders: deciphering signals of recent population history. Am J Hum Genet 66:999-1016
    • (2000) Am J Hum Genet , vol.66 , pp. 999-1016
    • Helgason, A.1    Sigureth, A.S.2    Gulcher, J.R.3
  • 22
  • 23
  • 24
    • 10744222382 scopus 로고    scopus 로고
    • Diversity of mitochondrial DNA lineages in south Siberia
    • Derenko MV, Grzybowski T, Malyarchuk BA et al (2003) Diversity of mitochondrial DNA lineages in south Siberia. Ann Hum Genet 67:391-411
    • (2003) Ann Hum Genet , vol.67 , pp. 391-411
    • Derenko, M.V.1    Grzybowski, T.2    Malyarchuk, B.A.3
  • 25
    • 0141615609 scopus 로고    scopus 로고
    • Mitochondrial DNA variability in Bosnians and Slovenians
    • Malyarchuk BA, Grzybowski T, Derenko MV et al (2003) Mitochondrial DNA variability in Bosnians and Slovenians. Ann Hum Genet 67:412-425
    • (2003) Ann Hum Genet , vol.67 , pp. 412-425
    • Malyarchuk, B.A.1    Grzybowski, T.2    Derenko, M.V.3
  • 26
    • 0242438840 scopus 로고    scopus 로고
    • Origin and diffusion of mtDNA haplogroup X
    • Reidla M, Kivisild T, Metspalu E et al (2003) Origin and diffusion of mtDNA haplogroup X. Am J Hum Genet 73:1178-1190
    • (2003) Am J Hum Genet , vol.73 , pp. 1178-1190
    • Reidla, M.1    Kivisild, T.2    Metspalu, E.3
  • 27
    • 6344223665 scopus 로고    scopus 로고
    • The molecular dissection of mtDNA haplogroup H confirms that the Franco-Cantabrian glacial refuge was a major source for the European gene pool
    • Achilli A, Rengo C, Magri C et al (2004) The molecular dissection of mtDNA haplogroup H confirms that the Franco-Cantabrian glacial refuge was a major source for the European gene pool. Am J Hum Genet 75:910-918
    • (2004) Am J Hum Genet , vol.75 , pp. 910-918
    • Achilli, A.1    Rengo, C.2    Magri, C.3
  • 28
    • 6344241453 scopus 로고    scopus 로고
    • Disuniting uniformity: A pied cladistic canvas of mtDNA haplogroup H in Eurasia
    • Loogväli E-L, Roostalu U, Malyarchuk BA et al (2004) Disuniting uniformity: a pied cladistic canvas of mtDNA haplogroup H in Eurasia. Mol Biol Evol 21:2012-2021
    • (2004) Mol Biol Evol , vol.21 , pp. 2012-2021
    • Loogväli, E.-L.1    Roostalu, U.2    Malyarchuk, B.A.3
  • 29
    • 8844274059 scopus 로고    scopus 로고
    • Phylogeny of mitochondrial DNA macrohaplogroup N in India, based on complete sequencing: Implications for the peopling of South Asia
    • Palanichamy MG, Sun C, Agrawal S et al (2004) Phylogeny of mitochondrial DNA macrohaplogroup N in India, based on complete sequencing: implications for the peopling of South Asia. Am J Hum Genet 75:966-978
    • (2004) Am J Hum Genet , vol.75 , pp. 966-978
    • Palanichamy, M.G.1    Sun, C.2    Agrawal, S.3
  • 30
    • 20244384729 scopus 로고    scopus 로고
    • Saami and Berbers - An unexpected mitochondrial DNA link
    • Achilli A, Rengo C, Battaglia V et al (2005) Saami and Berbers - an unexpected mitochondrial DNA link. Am J Hum Genet 76:883-886
    • (2005) Am J Hum Genet , vol.76 , pp. 883-886
    • Achilli, A.1    Rengo, C.2    Battaglia, V.3
  • 31
    • 20444443621 scopus 로고    scopus 로고
    • Low "penetrance" of phylogenetic knowledge in mitochondrial disease studies
    • Bandelt H-J, Achilli A, Kong Q-P et al (2005) Low "penetrance" of phylogenetic knowledge in mitochondrial disease studies. Biochem Biophys Res Commun 333:122-130
    • (2005) Biochem Biophys Res Commun , vol.333 , pp. 122-130
    • Bandelt, H.-J.1    Achilli, A.2    Kong, Q.-P.3
  • 32
    • 33646929523 scopus 로고    scopus 로고
    • Harvesting the fruit of the human mtDNA tree
    • Torroni A, Achilli A, Macaulay V et al (2006) Harvesting the fruit of the human mtDNA tree. Trends Genet 22:339-345
    • (2006) Trends Genet , vol.22 , pp. 339-345
    • Torroni, A.1    Achilli, A.2    Macaulay, V.3
  • 33
    • 0036847136 scopus 로고    scopus 로고
    • Characterization of the Caucasian haplogroups present in the SWGDAM forensic mtDNA dataset for 1771 human control region sequences. Scientific Working Group on DNA Analysis Methods
    • Allard MW, Miller K, Wilson M et al (2002) Characterization of the Caucasian haplogroups present in the SWGDAM forensic mtDNA dataset for 1771 human control region sequences. Scientific Working Group on DNA Analysis Methods. J Forensic Sci 47:1215-1223
    • (2002) J Forensic Sci , vol.47 , pp. 1215-1223
    • Allard, M.W.1    Miller, K.2    Wilson, M.3
  • 34
    • 20244362479 scopus 로고    scopus 로고
    • Analysis of phylogenetically reconstructed mutational spectra in human mitochondrial DNA control region
    • Malyarchuk BA, Rogozin IB, Berikov VB, Derenko MV (2002) Analysis of phylogenetically reconstructed mutational spectra in human mitochondrial DNA control region. Hum Genet 111:46-53
    • (2002) Hum Genet , vol.111 , pp. 46-53
    • Malyarchuk, B.A.1    Rogozin, I.B.2    Berikov, V.B.3    Derenko, M.V.4
  • 35
    • 0842305214 scopus 로고    scopus 로고
    • Control region sequences for East Asian individuals in the Scientific Working Group on DNA Analysis Methods forensic mtDNA data set
    • Allard MW, Wilson MR, Monson KL, Budowle B (2004) Control region sequences for East Asian individuals in the Scientific Working Group on DNA Analysis Methods forensic mtDNA data set. Leg Med 6:11-24
    • (2004) Leg Med , vol.6 , pp. 11-24
    • Allard, M.W.1    Wilson, M.R.2    Monson, K.L.3    Budowle, B.4
  • 36
    • 11444255650 scopus 로고    scopus 로고
    • Characterization of human control region sequences of the African American SWGDAM forensic mtDNA data set
    • Allard MW, Polanskey D, Miller K et al (2005) Characterization of human control region sequences of the African American SWGDAM forensic mtDNA data set. Forensic Sci Int 148:169-179
    • (2005) Forensic Sci Int , vol.148 , pp. 169-179
    • Allard, M.W.1    Polanskey, D.2    Miller, K.3
  • 37
    • 0031447981 scopus 로고    scopus 로고
    • A third hypervariable region in the human mitochondrial D-loop
    • Lutz S, Weisser H-J, Heizmann J, Pollak S (1997) A third hypervariable region in the human mitochondrial D-loop. Hum Genet 101:384
    • (1997) Hum Genet , vol.101 , pp. 384
    • Lutz, S.1    Weisser, H.-J.2    Heizmann, J.3    Pollak, S.4
  • 38
    • 12144289934 scopus 로고    scopus 로고
    • The western and eastern roots of the Saami - The story of genetic "outliers" told by mitochondrial DNA and Y chromosomes
    • Tambets K, Rootsi S, Kivisild T et al (2004) The western and eastern roots of the Saami - the story of genetic "outliers" told by mitochondrial DNA and Y chromosomes. Am J Hum Genet 74:661-682
    • (2004) Am J Hum Genet , vol.74 , pp. 661-682
    • Tambets, K.1    Rootsi, S.2    Kivisild, T.3
  • 39
    • 0042934312 scopus 로고    scopus 로고
    • Rapid screening of mtDNA coding region SNPs for the identification of west European Caucasian haplogroups
    • Brandstätter A, Parsons TJ, Parson W (2003) Rapid screening of mtDNA coding region SNPs for the identification of west European Caucasian haplogroups. Int J Legal Med 117:291-298
    • (2003) Int J Legal Med , vol.117 , pp. 291-298
    • Brandstätter, A.1    Parsons, T.J.2    Parson, W.3
  • 40
    • 0242365063 scopus 로고    scopus 로고
    • Mitochondrial diversity of a northeast German population sample
    • Poetsch M, Wittig H, Krause D, Lignitz E (2003) Mitochondrial diversity of a northeast German population sample. Forensic Sci Int 137:125-132
    • (2003) Forensic Sci Int , vol.137 , pp. 125-132
    • Poetsch, M.1    Wittig, H.2    Krause, D.3    Lignitz, E.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.