Development of two multiplex PCR systems for the analysis of 12 X-chromosomal STR loci in a northwestern Italian population sample

International Journal of Legal Medicine

Volumn 120, Issue 5, 2006, Pages 315-318

  Robino, C ^a   Giolitti, A ^a   Gino, S ^a   Torre, C ^a  

^a UNIVERSITY OF TURIN   (Italy)

Author keywords

DXS6789; Italy; Multiplex PCR; Short tandem repeats; X chromosome

Indexed keywords

GENOMIC DNA;

ARTICLE; CAPILLARY ELECTROPHORESIS; CHROMOSOME DELETION X; CHROMOSOME DUPLICATION; CHROMOSOME REARRANGEMENT; DNA ISOLATION; FEMALE; GENE FREQUENCY; GENE LOCUS; GENOTYPE; HAPLOTYPE; HUMAN; HUMAN EXPERIMENT; HUMAN TISSUE; ITALY; MALE; MULTIPLEX POLYMERASE CHAIN REACTION; MUTATION; NORMAL HUMAN; ORAL BIOPSY; PATERNITY TEST; PRIORITY JOURNAL; SHORT TANDEM REPEAT; STATISTICAL PARAMETERS; X CHROMOSOME;

CHROMOSOMES, HUMAN, X; FEMALE; GENETICS, POPULATION; HUMANS; ITALY; MALE; MICROSATELLITE REPEATS; POLYMERASE CHAIN REACTION; X CHROMOSOME;

EID: 33747333889     PISSN: 09379827     EISSN: 14371596     Source Type: Journal    
DOI: 10.1007/s00414-006-0115-9     Document Type: Article

References (27)

1. Szibor R, Krawczak M, Hering S, Edelmann J, Kuhlisch E, Krause D (2003) Use of X-linked markers for forensic purposes. Int J Legal Med 117:67-74
2. Bini C, Ceccardi S, Ferri G et al (2005) Development of a heptaplex PCR system to analyse X-chromosome STR loci from five Italian population samples. A collaborative study. Forensic Sci Int 153:231-236
3. Tabbada KA, De Ungria MC, Faustino LP, Athanasiadou D, Stradmann-Bellinghausen B, Schneider PM (2005) Development of a pentaplex X-chromosomal short tandem repeat typing system and population genetics studies. Forensic Sci Int 154:173-180
4. Poetsch M, Petersmann H, Repenning A, Lignitz E (2005) Development of two pentaplex systems with X-chromosomal STR loci and their allele frequencies in a northeast German population. Forensic Sci Int 155:71-76
5. Edelmann J, Hering S, Kuhlisch E, Szibor R (2002) Validation of the STR DXS7424 and the linkage situation on the X-chromosome. Forensic Sci Int 125:217-222
6. Szibor R, Hering S, Kuhlisch E, Plate I, Demberger S, Krawczak M, Edelmann J (2005) Haplotyping of STR cluster DXS6801-DXS6809-DXS6789 on Xq21 provides a powerful tool for kinship testing. Int J Legal Med 119:363-369
7. Kong A, Gudbjartsson DF, Sainz J et al (2002) A high-resolution recombination map of the human genome. Nat Genet 31:241-247
8. Szibor R, Hering S, Edelmann J (2005) A new Web site compiling forensic chromosome X research is now online. Int J Legal Med 120(4):252-254 DOI 10.1007/s00414-005-0029-y
9. Szibor R, Edelmann J, Hering S et al (2003) Cell line DNA typing in forensic genetics - the necessity of reliable standards. Forensic Sci Int 138:37-43
10. Edelmann J, Szibor R (2005) Validation of the X-linked STR DXS6801. Forensic Sci Int 148:219-220
11. Hering S, Brundirs N, Kuhlisch E et al (2004) DXS10011: studies on structure, allele distribution in three populations and genetic linkage to further q-telomeric chromosome X markers. Int J Legal Med 118:313-319
12. Bär W, Brinkmann B, Budowle B et al (1997) DNA recommendations. Further report of the DNA Commission of the ISFH regarding the use of short tandem repeat systems. International Society for Forensic Haemogenetics. Int J Legal Med 110:175-176
13. Edelmann J, Hering S, Michael M et al (2001) 16 X-chromosome STR loci frequency data from a German population. Forensic Sci Int 124:215-218
14. Edelmann J, Deichsel D, Plate I, Käser M, Szibor R (2003) Validation of the X-chromosomal STR DXS6809. Int J Legal Med 117:241-244
15. Edelmann J, Deichsel D, Hering S, Plate I, Szibor R (2002) Sequence variation and allele nomenclature for the X-linked STRs DXS9895, DXS8378, DXS7132, DXS6800, DXS7133, GATA172D05, DXS7423 and DXS8377. Forensic Sci Int 129:99-103
16. Schneider S, Roessli D, Excoffier L (2000) Arlequin version 2.000: A software for population genetics data analysis. Genetics and Biometry Laboratory, University of Geneva, Switzerland
17. Nei M, Roychoudhury AK (1974) Sampling variances of heterozygosity and genetic distance. Genetics 76:379-390
18. Botstein D, White RL, Skolnick M, Davis RW (1980) Construction of a genetic linkage map in man using restriction fragment length polymorphisms. Am J Hum Genet 32:314-331
19. Desmarais D, Zhong Y, Chakraborty R, Perreault C, Busque L (1998) Development of a highly polymorphic STR marker for identity testing purposes at the human androgen receptor gene (HUMARA). J Forensic Sci 43:1046-1049
20. Krüger J, Fuhrmann W, Lichte KH, Steffens C (1968) Zur Verwendung der sauren Erythrocytenphosphatase bei der Vaterschaftsbegutachtung. Dtsch Z Gesamte Gerichtl Med 64:127-146
21. Kishida T, Tamaki Y (1997) Japanese population data on X-chromosomal STR locus AR. Nippon Hoigaku Zasshi 51:376-379
22. Wiegand P, Berger B, Edelmann J, Parson W (2003) Population genetic comparisons of three X-chromosomal STRs. Int J Legal Med 117:62-65
23. Lee HY, Park MJ, Jeong CK et al (2004) Genetic characteristics and population study of 4 X-chromosomal STRs in Koreans: evidence for a null allele at DXS9898. Int J Legal Med 118:355-360
24. Turrina S, De Leo D (2003) Population data of three X-chromosomal STRs: DXS7132, DXS7133 and GATA172D05 in north Italy. J Forensic Sci 48:1428-1429
25. Toni C, Presciuttini S, Spinetti I, Domenici R (2003) Population data of four X-chromosome markers in Tuscany, and their use in a deficiency paternity case. Forensic Sci Int 137:215-216
26. Iafrate AJ, Feuk L, Rivera MN et al (2004) Detection of large-scale variation in the human genome. Nat Genet 36:949-951
27. Shaw CJ, Lupski JR (2004) Implications of human genome architecture for rearrangement-based disorders: the genomic basis of disease. Hum Mol Genet 13(Spec No 1):R57-R64