Genetic labelling and application of the isoproturon-mineralizing Sphingomonas sp. strain SRS2 in soil and rhizosphere

Letters in Applied Microbiology

Volumn 43, Issue 3, 2006, Pages 280-286

  Kristensen, K E ^a,b   Jacobsen, C S ^a,c   Hansen, L H ^b   Aamand, J ^a   Morgan, J A W ^d   Sternberg, C ^e   Sorensen S R ^a  

^a GEOLOGICAL SURVEY OF DENMARK AND GREENLAND   (Denmark)

^b UNIVERSITY OF COPENHAGEN   (Denmark)

^c UNIVERSITY OF COPENHAGEN   (Denmark)

^d UNIVERSITY OF WARWICK   (United Kingdom)

^e TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

Author keywords

Bacteria; Degradation; Lux; Pesticides; Soil; Survival

Indexed keywords

BIODEGRADATION; BIOREMEDIATION; BIOTECHNOLOGY; PLANTS (BOTANY);

COLONISATION; HERBICIDE ISOPROTURON; ISOPROTURON; LABELINGS; LABORATORY SYSTEM; LUX; MATINGS; PLANT ROOTS; SPHINGOMONAS SP; SURVIVAL;

SOILS;

HERBICIDE; ISOPROTURON;

BACTERIA; BACTERIOLOGY; CONDITION MONITORING; DEGRADATION; GENETIC ENGINEERING; MUTAGENESIS; PESTICIDES; PLANTS (BOTANY); SOILS;

BACTERIUM; BARLEY; BIOREMEDIATION; COLONIZATION; GENETIC ALGORITHM; RHIZOSPHERE; SOIL MICROORGANISM;

ARTICLE; BACTERIAL COLONIZATION; BACTERIUM MUTANT; BARLEY; BIODEGRADATION; BIOREMEDIATION; LUMINESCENCE; NONHUMAN; PLANT ROOT; RHIZOSPHERE; SOIL; SPHINGOMONAS; STRAIN IDENTIFICATION; SURVIVAL; WATER CONTAMINATION;

HORDEUM VULGARE SUBSP. VULGARE; SPHINGOMONAS SP.;

EID: 33747096133     PISSN: 02668254     EISSN: 1472765X     Source Type: Journal    
DOI: 10.1111/j.1472-765X.2006.01956.x     Document Type: Article

References (23)

1. Baelum, J., Henriksen, T., Hansen, H.C.B. and Jacobsen, C.S. (2006) The degradation of 4-chloro-2-methylphenoxyacetic acid in top- and subsoil is quantitatively linked to the class III tfdA gene. Appl Environ Microbiol 72, 1476-1486.
2. Bastiaens, L., Springael, D., Dejonghe, W., Wattiau, P., Verachtert, H. and Diels, L.A. (2001) Transcriptional luxAB reporter fusion responding to fluorene in Sphingomonas sp. LB126 and its initial characterisation for whole-cell bioreporter purposes. Res Microbiol 152, 849-859.
3. Bending, G.D., Lincoln, S.D., Sørensen, S.R., Morgan, J.A.W., Aamand, J. and Walker, A. (2003) In-field spatial variability in the degradation of the phenyl-urea herbicide isoproturon is the result of interactions between degradative Sphingomonas spp. and soil pH. Appl Environ Microbiol 69, 827-834.
4. Bhatia, R., Dogra, R.C. and Sharma, P.K. (2002) Construction of green fluorescent protein (GFP)-marked strains of Bradyrhizobium for ecological studies. J Appl Microbiol 93, 835-839.
5. Boldt, T.S., Sørensen, J., Karlson, U., Molin, S. and Ramos, C. (2004) Combined use of different Gfp reporters for monitoring single-cell activities of a genetically modified PCB degrader in the rhizosphere of alfalfa. FEMS Microbiol Ecol 48, 139-148.
6. De-Lorenzo, V., Herrero, M., Jakubzik, U. and Timmis, K.N. (1990) Mini-Tn5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in Gram-negative eubacteria. J Bacteriol 172, 6568-6572.
7. Elväng, A.M., Westerberg, K., Jernberg, C. and Jansson, J.K. (2001) Use of green fluorescent protein and luciferase biomarkers to monitor survival and activity of Arthrobacter chlorophenolicus A6 cells during degradation of 4-chlorophenol in soil. Environ Microbiol 3, 32-42.
8. Jacobsen, C.S. (1995) Rapid microscale detection of specific bacterial DNA in soil using magnetic capture-hybridization and polymerase chain reaction amplification assay (MCHPCR). Appl Environ Microbiol 61, 3347-3352.
9. Jacobsen, C.S. (1997) Plant protection and rhizosphere colonization of barley by seed inoculated herbicide degrading Burkholderia (Pseudomonas) cepacia DBO1 (pRO101) in 2,4-D contaminated soil. Plant and Soil 189, 139-144.
10. Jacobsen, C.S. and Pedersen, J.C. (1992) Growth and survival of Pseudomonas cepacia DBO1 (pRO101) in soil amended with 2,4-dichlorophenoxyacetic acid. Biodegradation 2, 245-252.
11. Johannesen, H., Sørensen, S.R. and Aamand, J. (2003) Mineralization of soil-aged isoproturon and isoproturon metabolites by Sphingomonas sp. SRS2. J Environ Qual 32, 1250-1257.
12. Juhler, R.K., Sørensen, S.R. and Larsen, L. (2001) Analysing transformation products of herbicide residues in environmental samples. Water Res 35, 1371-1378.
13. Kragelund, L., Hosbond, C. and Nybroe, O. (1997) Distribution of metabolic activity and phosphate starvation response of lux-tagged Pseudomonas fluorescens reporter bacteriain the barley rhizosphere. Appl Environ Microbiol 63, 4920-4928.
14. Molina, L., Ramos, C., Duque, E., Ronchel, M.C., García, J.M., Wyke, L. and Ramos, J.L. (2000) Survival of Pseudomonas putida KT2440 in soil and in the rhizosphere of plants under greenhouse and environmental conditions. Soil Biol Biochem 32, 315-321.
15. Reasoner, D.J. and Geldreich, E.E. (1985) A new medium for the enumeration and subculture of bacteria from potable water. Appl Environ Microbiol 49, 1-7.
16. Romantschuk, M., Sarand, I., Petänen, T., Peltola, R., Jonsson-Vihanne, M., Koivula, T., Yrjälä, K. and Haahtela, K. (2000) Means to improve the effect of in situ bioremediation of contaminated soil: an overview of novel approaches. Environ Pollut 107, 179-185.
17. Sørensen, S.R., Ronen, Z. and Aamand, J. (2001) Isolation from agricultural soil and characterization of a Sphingomonas sp. able to mineralize the phenylurea herbicide isoproturon. Appl Environ Microbiol 67, 5403-5409.
18. Sørensen, S.R., Ronen, Z. and Aamand, J. (2002) Growth in coculture stimulates metabolism of the phenylurea herbicide isoproturon by Sphingomonas sp. strain SRS2. Appl Environ Microbiol 68, 3478-3485.
19. Sørensen, S.R., Bending, G.D., Jacobsen, C.S., Walker, A. and Aamand, J. (2003) Microbial degradation of isoproturon and related phenylurea herbicides in and below agricultural fields. FEMS Microbiol Ecol 45, 1-11.
20. Salanitro, J.P., Johnson, P.C., Spinnler, G.E., Maner, P.M., Winniewski, H.L. and Bruce, C. (2000) Field scale demonstration of enhanced MTBE bioremediation through aquifer bioaugmentation and oxygenation. Environ Sci Technol 34, 4152-4162.
21. Samanta, S.K., Singh, O.V. and Jain, R.K. (2002) Polycyclic aromatic hydrocarbons: environmental pollution and bioremediation. Trends Biotechnol 20, 243-248.
22. Wang, G., Gentry, T.J., Grass, G., Josephson, K., Rensing, C. and Pepper, I.L. (2004) Real-time PCR quantification of a green fluorescent protein-labeled, genetically engineered Pseudomonas putida strain during 2-chlorobenzoate degradation in soil. FEMS Microbiol Lett 233, 307-314.
23. Zanardini, E., Pisoni, C., Ranalli, G., Zucchi, M. and Sorlini, C. (2002) Methyl tert-buthyl ether (MTBE) bioremediation studies. Ann Microbiol 52, 207-221.