Design and implementation of a library-based information service in molecular biology and genetics at the University of Pittsburgh

Journal of the Medical Library Association

Volumn 94, Issue 3, 2006, Pages

  Chattopadhyay, Ansuman ^a   Tannery, Nancy Hrinya ^a   Silverman, Deborah A L ^a   Bergen, Phillip ^a   Epstein, Barbara A ^a  

^a UNIVERSITY OF PITTSBURGH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOINFORMATICS; COMMUNICATION AID; COMPUTER AIDED DESIGN; CONSULTATION; DATA ANALYSIS SOFTWARE; DATA BASE; GENETICS; HEALTH SCIENCE; INFORMATION SERVICE; LIBRARY; MEDICAL RESEARCH; MOLECULAR BIOLOGY; REVIEW; STAFF TRAINING; UNIVERSITY;

COMPUTATIONAL BIOLOGY; DATABASES; GENETICS; INSERVICE TRAINING; INTERNET; LIBRARIES, MEDICAL; LIBRARY SERVICES; MOLECULAR BIOLOGY; PENNSYLVANIA; PROGRAM DEVELOPMENT; SOFTWARE; UNIVERSITIES;

EID: 33746927046     PISSN: 15365050     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review

References (24)

1. BAXEVANIS AD. The molecular biology database collection: 2003 update. Nucleic Acids Res 2003 Jan 1;31(1):1-12.
2. GEER RC, MESSERSMITH DJ, ALPI K, BHAGWAT M, CHATTOPADHYAY A, GAEDEKE N, LYON J, MINIE ME, MORRIS RC, OHLES JA, OSTERBUR DL, TENNANT MR. Advanced workshop for bioinformatics information specialists. [Web document]. Bethesda, MD: National Center for Biotechnology Information. [rev. 19 Oct 2005; cited 15 Feb 2006]. 〈http://www.ncbi.nlm.nih.gov/Class/NAWBIS/〉.
3. YARFITZ S, KETCHELL DS. A library-based bioinformatics services program. Bull Med Libr Assoc Jan 2000;88(1):36-48.
4. ALTSCHUL SF, GISH W, MILLER W, MYERS EW, LIPMAN DJ. Basic local alignment search tool. J Mol Biol 1990 Oct 5;215(3):403-10.
5. ALTSCHUL SF, MADDEN TL, SCHAFFER AA, ZHANG J, ZHANG Z, MILLER W, LIPMAN DJ. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997 Sep 1;25(17):3389-402.
6. CELLOMICS. CellSpace knowledge miner. [Web document]. Pittsburgh, PA: Cellomics, 2005. [rev. 23 Nov 2004; cited 15 Feb 2006]. 〈http://www. cellomics.com/content/menu/CellSpace_Knowledge_Miner/〉.
7. LU G, MORIYAMA EN. Vector NTI, a balanced all-in-one sequence analysis suite. Brief Bioinform 2004 Dec;5(4):378-88.
8. WHEELER DL, CHURCH DM, LASH AE, MADDEN TL, PONTIUS JU, SCHULER GD, SCHRIML LM, SEQUEIRA E, TATUSOVA TA, WAGNER L. Database resources of the National Center for Biotechnology Information: 2002 update. Nucleic Acids Res 2002 Jan 1;30(1):13-6.
9. STALKER J, GIBBINS B, MEIDL P, SMITH J, SPOONER W, HOTZ HR, COX AV. The Ensembl Web site: mechanics of a genome browser. Genome Res 2004 May;14(5):951-5.
10. KAROLCHIK D, BAERTSCH R, DIEKHANS M, FUREY TS, HINRICHS A, LU YT, ROSKIN KM, SCHWARTZ M, SUGNET CW, THOMAS DJ, WEBER RJ, HAUSSLER D, KENT WJ; UNIVERSITY OF CALIFORNIA SANTA CRUZ. The UCSC genome browser database. Nucleic Acids Res 2003 Jan 1;31(1):51-4.
11. JENSSEN TK, LAEGREID A, KOMOROWSKI J, HOVIG E. A literature network of human genes for high-throughput analysis of gene expression. Nat Genet 2001 May;28(1):21-8.
12. TASHEVA ES, KLOCKE B, CONRAD GW. Analysis of transcriptional regulation of the small leucine rich proteoglycans. Mol Vis 2004 Oct 7;10:758-72.
13. MAGLOTT D, OSTELL J, PRUITT KD, TATUSOVA T. Entrez Gene: gene-centered information at NCBI. Nucleic Acids Res 2005 Jan 1;33(database issue):D54-8.
14. MILES MC, JANKET ML, WHEELER ED, CHATTOPADHYAY A, MAJUMDER B, DERICCO J, AYYAVOO V. Molecular and functional characterization of a novel splice variant of ANKHD1 that lacks the KH domain and its role in cell survival and appoptosis. FEBS J 2005 Aug;272(16):4091-102.
15. THE HEALTH SCIENCES LIBRARY SYSTEM (HSLS), UNIVERSITY OF PITTSBURGH. The molecular biology Web portal. [Web document]. Pittsburgh, PA: The University, 2006. [rev. 19 Oct 2005; cited 15 Feb 2006]. 〈http://www.hsls.pitt.edu/ guides/genetics/〉.
16. GALPERIN MY. The molecular biology database collection: 2005 update. Nucleic Acids Res 2005 Jan 1;33(database issue):D5-24.
17. VIVISIMO. [Web document]. Pittsburgh, PA: Vivisimo, 2006. [rev. 19 Oct 2005; cited 15 Feb 2006]. 〈http://www.vivisimo.com〉.
18. WEBTRENDS. [Web document]. Portland, OR: Web Trends, 2006. [rev. 19 Oct 2005; cited 15 Feb 2006]. 〈http://www.Webtrends.com〉.
19. COSTANZO MC, CRAWFORD ME, HIRSCHMAN JE, KRANZ JE, OLSEN P, ROBERTSON LS, SKRZYPEK MS, BRAUN BR, HOPKINS KL, KONDU P, LENGIEZA C, LEW-SMITH JE, TILLBERG M, GARRELS JI. YPD, PombePD and WormPD: model organism volumes of the BioKnowledge library, an integrated resource for protein information. Nucleic Acids Res 2001 Jan 1;29(1):75-9.
20. WILEY INTERSCIENCE. Current protocols. [Web document]. Hoboken, NJ: John Wiley & Sons, 2006. [rev. 19 Oct 2005; cited 15 Feb 2006]. 〈http://www3.interscience.wiley.com/cgi-bin/browsebyproduct?type=5〉.
21. TIPPMANN HF. Analysis for free: comparing programs for sequence analysis. Brief Bioinform 2004 Mar;5(1):82-7.
22. CHATTOPADHYAY A. Information hubs in molecular biology and genetics. Paper presented at: The Advancing Practice, Instruction and Innovation through Informatics (APIII) Meeting; October 2002; Pittsburgh, PA.
23. CHATTOPADHYAY A, EPSTEIN BA, MICKELSON PC, TANNERY NH. Development of information service program in molecular biology and genetics. Paper presented at: MLA '03, Medical Library Association Annual Meeting; San Diego, CA; 2003.
24. CHATTOPADHYAY A. Selection of resources for the development of an information service program in molecular biology and genetics. Paper presented at: MLA '04, Medical Library Association Annual Meeting; Washington, DC; 2004.