Real-time multi-scale brain data acquisition, assembly, and analysis using an end-to-end OptIPuter

Future Generation Computer Systems

Volumn 22, Issue 8, 2006, Pages 1032-1039

  Singh, Rajvikram ^b   Schwarz, Nicholas ^b   Taesombut, Nut ^c   Lee, David ^a   Jeong, Byungil ^b   Renambot, Luc ^b   Lin, Abel W ^a   West, Ruth ^a   Otsuka, Hiromu ^e   Naito, Sei ^f   Peltier, Steven T ^a   Martone, Maryann E ^a   Nozaki, Kazunori ^d   Leigh, Jason ^b   Ellisman, Mark H ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF ILLINOIS AT CHICAGO   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

^d OSAKA UNIVERSITY   (Japan)

^e KDDI CORPORATION   (Japan)

^f KDDI R AND D LABORATORIES INC   (Japan)

Author keywords

Graphics clusters; HDTV streaming; Montage images; Multi scale correlated microscopy; Optical networks; Remote instrumentation; Scientific visualization; Telescience; Tile displays; Tiled displays

Indexed keywords

BRAIN; DATA ACQUISITION; DATA STORAGE EQUIPMENT; DISTRIBUTED COMPUTER SYSTEMS; HIGH DEFINITION TELEVISION; MEDICAL IMAGING;

GRAPHICS CLUSTERS; HDTV STREAMING; MONTAGE IMAGES; MULTI-SCALE CORRELATED MICROSCOPY; OPTICAL NETWORKS; REMOTE INSTRUMENTATION; SCIENTIFIC VISUALIZATION; TELESCIENCE; TILE DISPLAYS; TILED DISPLAYS;

REAL TIME SYSTEMS;

EID: 33746903113     PISSN: 0167739X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.future.2006.03.017     Document Type: Article

References (20)

1. L. Renambot, A. Rao, R. Singh, B. Jeong, N. Krishnaprasad, V. Vishwanath, V. Chandrasekhar, N. Schwarz, A. Spale, C. Zhang, G. Goldman, J. Leigh, A. Johnson, SAGE: The Scalable Adaptive Graphics Environment, in: Proceedings of WACE 2004, 23-24 September 2004, Nice, France, 2004
2. R. Singh, B. Jeong, L. Renambot, A. Johnson, J. Leigh, TeraVision: a distributed, scalable, high resolution graphics streaming system, in: Proceedings of Cluster 2004, San Diego, CA, 2004
3. N. Taesombut, A. Chien, Distributed Virtual Computer (DVC): Simplifying the development of high performance grid applications, in: Proceedings of the Workshop on Grids and Advanced Networks, GAN '04, Chicago, IL, April 2004 (held in conjunction with the IEEE Cluster Computing and the Grid (CCGrid2004) Conference)
4. R. Wu, A.A. Chien, GTP: Group transport protocol for Lambda-Grids, in: Proceedings of the 4th IEEE/ACM International Symposium on Cluster Computing and the Grid, CCGrid2004, Chicago, IL, April 2004
5. J. Leigh, L. Renambot, T.A. DeFanti, M. Brown, E. He, N. Krishnaprasad, J.A. Meerasa, A. Nayak, K. Park, R. Singh, S. Venkataraman, C. Zhang, D. Livingston, M. McLaughlin, An Experimental OptIPuter architecture for data-intensive collaboration visualization, in: Third Annual Workshop on Advanced Collaborative Environments, Seattle, Washington, June 22, 2003 (co-located at the Twelfth IEEE International Symposium on High Performance Distributed Computing (HPDC 12) and Global Grid Forum 8)
6. Zhang C., Leigh J., and DeFanti T.A. TeraScope: Distributed visual data mining of terascale data sets over photonic networks. Future Generation Computer Systems 19 6 (2003) 935-943
7. Official OptIPuter website. http://www.optiputer.net/
8. Peltier S.T., et al. The telescience portal for advanced tomography applications. Journal of Parallel and Distributed Computing: Computational Grid 63 5 (2002) 539-550
9. N. Krishnaprasad, V. Vishwanath, S. Venkataraman, A. Rao, L. Renambot, J. Leigh, A. Johnson, JuxtaView - a tool for interactive visualization of large imagery on scalable tiled displays, in: Proceedings of IEEE Cluster 2004, San Diego, CA
10. N. Schwarz, S. Venkataraman, L. Renambot, N. Krishnaprasad, V. Vishwanath, J. Leigh, A. Johnson, G. Kent, A. Nayak, Vol-a-Tile-a tool for interactive exploration of large volumetric data on scalable tiled displays, in: IEEE Visualization 2004 Poster Compendium, 2004
11. B. Jeong, R. Jagodi, L. Renambot, R. Singh, A. Johnson, J. Leigh, Scalable graphics architecture for high-resolution displays, in: Using Large, High-Resolution Displays for Information Visualization, Minneapolis, MN, USA, 24 October 2005
12. C. Xiong, J. Leigh, E. He, V. Vishwanath, T. Murata, L. Renambot, T. DeFanti, LambdaStream - a data transport protocol for streaming network-intensive applications over photonic networks, in: Proceedings of the Third International Workshop on Protocols for Fast Long-Distance Networks, Lyon, France
13. Official Calit2 website. http://www.calit2.net/
14. Official LambdaRam website. http://www.evl.uic.edu/cavern/optiputer/lambdaram.html
15. Lee D., et al. Global telescience featuring IPv6 at iGrid2002. Future Generation Computer Systems 19 6 (2003) 1031-1039
16. Official PIN website. http://www.evl.uic.edu/core.php?mod=4&type=1&indi=216
17. Official LambdaCam website. http://www.evl.uic.edu/cavern/lambdacam/
18. http://www.kddilabs.com/index2.html
19. X. Wu, A.A. Chien, Evaluation of rate-based transfer protocols for Lambda-Grids, in: Proceedings of the 12th IEEE International Symposium on High-Performance Distributed Computer, HPDC, June 2004
20. Martone M.E., Deerinck T.J., Yamada N., Bushong E., and Ellisman Mark H. Correlated 3D light and electron microscopy: Use of high voltage electron microscopy and electron tomography for imaging large biological structures. Journal of Histotechnology 23 3 (2000) 261-270