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Volumn 7, Issue , 2006, Pages

SUP: An extension to SLINK to allow a larger number of marker loci to be simulated in pedigrees conditional on trait values

Author keywords

[No Author keywords available]

Indexed keywords

ALLELE; ARTICLE; BIOINFORMATICS; COMPUTER PROGRAM; CONTROLLED STUDY; FOUNDER EFFECT; GENE LINKAGE DISEQUILIBRIUM; GENE LOCUS; GENE SEGREGATION; GENETIC ALGORITHM; GENETIC RECOMBINATION; GENOTYPE; HAPLOTYPE; INTERMETHOD COMPARISON; PEDIGREE ANALYSIS; QUANTITATIVE TRAIT LOCUS; SIMULATION;

EID: 33746861136     PISSN: 14712156     EISSN: 14712156     Source Type: Journal    
DOI: 10.1186/1471-2156-7-40     Document Type: Article
Times cited : (7)

References (25)
  • 1
    • 2442709349 scopus 로고    scopus 로고
    • Pedigree generation for analysis of genetic linkage and association
    • Bass MP, Martin EP, Hauser ER: Pedigree generation for analysis of genetic linkage and association. Pac Symp Biocomput 2004, 9:93-103.
    • (2004) Pac Symp Biocomput , vol.9 , pp. 93-103
    • Bass, M.P.1    Martin, E.P.2    Hauser, E.R.3
  • 2
    • 23044449472 scopus 로고    scopus 로고
    • Extension of the SIMLA package for generating pedigrees with complex inheritance patterns: Environmental covariates, gene-gene and gene-environment interaction
    • Schmidt M, Hauser ER, Martin ER, Schmidt S: Extension of the SIMLA package for generating pedigrees with complex inheritance patterns: environmental covariates, gene-gene and gene-environment interaction. Stat Appl Genet Mol Bio 2005, 4:15.
    • (2005) Stat Appl Genet Mol Bio , vol.4 , pp. 15
    • Schmidt, M.1    Hauser, E.R.2    Martin, E.R.3    Schmidt, S.4
  • 3
    • 27544433613 scopus 로고    scopus 로고
    • SimPed: A simulation program to generate haplotype and genotype data for pedigree structures
    • Leal SM, Yan K, Müller-Myhsok B: SimPed: a simulation program to generate haplotype and genotype data for pedigree structures. Hum Hered 2005, 60:119-122.
    • (2005) Hum Hered , vol.60 , pp. 119-122
    • Leal, S.M.1    Yan, K.2    Müller-Myhsok, B.3
  • 5
    • 23944469845 scopus 로고    scopus 로고
    • Recent developments in genomewide association scans: A workshop summary and review
    • Thomas DC, Haile RW, Duggan D: Recent developments in genomewide association scans: a workshop summary and review. Am J Hum Genet 2005, 77:337-345.
    • (2005) Am J Hum Genet , vol.77 , pp. 337-345
    • Thomas, D.C.1    Haile, R.W.2    Duggan, D.3
  • 6
    • 10044294770 scopus 로고    scopus 로고
    • Evaluating associations of haplotypes with traits
    • Schaid DJ: Evaluating associations of haplotypes with traits. Genet Epidemiol 2004, 27:348-364.
    • (2004) Genet Epidemiol , vol.27 , pp. 348-364
    • Schaid, D.J.1
  • 7
    • 33644830588 scopus 로고    scopus 로고
    • Power and sample size for testing associations of haplotypes with complex traits
    • Schaid DJ: Power and sample size for testing associations of haplotypes with complex traits. Ann Hum Genet 2005, 70:116-130.
    • (2005) Ann Hum Genet , vol.70 , pp. 116-130
    • Schaid, D.J.1
  • 8
    • 24344450191 scopus 로고    scopus 로고
    • Power and sample size calculations for genetic case/control studies using gene-centric SNP maps: Application to human chromosomes 6, 21, and 22 in three populations
    • De La Vega FM, Gordon D, Su X, Scafe C, Isaac H, Gilbert DA, Spier EG: Power and sample size calculations for genetic case/control studies using gene-centric SNP maps: application to human chromosomes 6, 21, and 22 in three populations. Hum Hered 2005, 60:43-60.
    • (2005) Hum Hered , vol.60 , pp. 43-60
    • De La Vega, F.M.1    Gordon, D.2    Su, X.3    Scafe, C.4    Isaac, H.5    Gilbert, D.A.6    Spier, E.G.7
  • 9
    • 4544260056 scopus 로고    scopus 로고
    • Transmission-ratio distortion and allele sharing in affected sib pairs: A new linkage statistic with reduced bias, with application to chromosome 6q25.3
    • Lemire M, Roslin NM, Laprise C, Hudson TJ, Morgan K: Transmission-ratio distortion and allele sharing in affected sib pairs: a new linkage statistic with reduced bias, with application to chromosome 6q25.3. Am J Hum Genet 2004, 75:571-586.
    • (2004) Am J Hum Genet , vol.75 , pp. 571-586
    • Lemire, M.1    Roslin, N.M.2    Laprise, C.3    Hudson, T.J.4    Morgan, K.5
  • 10
    • 0039513062 scopus 로고
    • Computer-simulation methods in human linkage analysis
    • Ott J: Computer-simulation methods in human linkage analysis. Proc Natl Acad Sci USA 1989, 86:4175-4178.
    • (1989) Proc Natl Acad Sci USA , vol.86 , pp. 4175-4178
    • Ott, J.1
  • 11
    • 0000801438 scopus 로고
    • SLINK: A general simulation program for linkage analysis
    • Weeks DE, Ott J, Lathrop GM: SLINK: a general simulation program for linkage analysis. Am J Hum Genet 1990, 47:A204.
    • (1990) Am J Hum Genet , vol.47 , pp. 204
    • Weeks, D.E.1    Ott, J.2    Lathrop, G.M.3
  • 14
    • 0033910721 scopus 로고    scopus 로고
    • Comparison of tests for association and linkage in incomplete families
    • Cervino AC, Hill AV: Comparison of tests for association and linkage in incomplete families. Am J Hum Genet 2000, 67:120-132.
    • (2000) Am J Hum Genet , vol.67 , pp. 120-132
    • Cervino, A.C.1    Hill, A.V.2
  • 15
    • 0034917944 scopus 로고    scopus 로고
    • A transmission/disequilibrium test that allows for genotyping errors in the analysis of single-nucleotide polymorphism data
    • Gordon D, Heath SC, Liu X, Ott J: A transmission/disequilibrium test that allows for genotyping errors in the analysis of single-nucleotide polymorphism data. Am J Hum Genet 2001, 69:371-380.
    • (2001) Am J Hum Genet , vol.69 , pp. 371-380
    • Gordon, D.1    Heath, S.C.2    Liu, X.3    Ott, J.4
  • 17
    • 0027213849 scopus 로고
    • Chromosome-based method for rapid computer simulation in human genetic linkage analysis
    • Terwilliger JD, Speer M, Ott J: Chromosome-based method for rapid computer simulation in human genetic linkage analysis. Genet Epidemiol 1993, 10:217-224.
    • (1993) Genet Epidemiol , vol.10 , pp. 217-224
    • Terwilliger, J.D.1    Speer, M.2    Ott, J.3
  • 18
    • 0034098774 scopus 로고    scopus 로고
    • Allegro, a new computer program for multipoint linkage analysis
    • Gudbjartsson DF, Jonasson K, Frigge ML, Kong A: Allegro, a new computer program for multipoint linkage analysis. Nat Genet 2000, 25:12-13.
    • (2000) Nat Genet , vol.25 , pp. 12-13
    • Gudbjartsson, D.F.1    Jonasson, K.2    Frigge, M.L.3    Kong, A.4
  • 20
    • 16844366786 scopus 로고    scopus 로고
    • Genome-wide strategies for detecting multiple loci that influence complex diseases
    • Marchini J, Donnelly P, Cardon LR: Genome-wide strategies for detecting multiple loci that influence complex diseases. Nat Genet 2005, 37:413-417.
    • (2005) Nat Genet , vol.37 , pp. 413-417
    • Marchini, J.1    Donnelly, P.2    Cardon, L.R.3
  • 21
    • 1642588402 scopus 로고    scopus 로고
    • How to model a complex trait. 2. Analysis with two disease loci
    • Strauch K, Fimmers P, Baur MP, Wienker TF: How to model a complex trait. 2. Analysis with two disease loci. Hum Hered 2003, 56:200-211.
    • (2003) Hum Hered , vol.56 , pp. 200-211
    • Strauch, K.1    Fimmers, P.2    Baur, M.P.3    Wienker, T.F.4
  • 22
    • 13444269543 scopus 로고    scopus 로고
    • Haploview: Analysis and visualization of LD and haplotype maps
    • Barrett J, Fry B, Maller J, Daly M: Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 2005, 21:263-265.
    • (2005) Bioinformatics , vol.21 , pp. 263-265
    • Barrett, J.1    Fry, B.2    Maller, J.3    Daly, M.4
  • 24
    • 19544389523 scopus 로고    scopus 로고
    • Mega2: Data-handling for facilitating genetic linkage and association analyses
    • Mukhopadhyay N, Almasy L, Schroeder M, Mulvihill W, Weeks D: Mega2: data-handling for facilitating genetic linkage and association analyses. Bioinformatics 2005, 15:2556-2557.
    • (2005) Bioinformatics , vol.15 , pp. 2556-2557
    • Mukhopadhyay, N.1    Almasy, L.2    Schroeder, M.3    Mulvihill, W.4    Weeks, D.5


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