-
1
-
-
0035103574
-
'A modelling study of feedforward activation in human erythrocyte glycolysis'
-
Bali, M., and Thomas, S.R.: 'A modelling study of feedforward activation in human erythrocyte glycolysis', C. R. Acad. Sci. III Sci. Vie, 2001, 324, p. 185-199
-
(2001)
C. R. Acad. Sci. III Sci. Vie
, vol.324
, pp. 185-199
-
-
Bali, M.1
Thomas, S.R.2
-
2
-
-
0018523322
-
'Allosteric regulation in the open futile cycle fructose-6-P-fructose-1,6-P2'
-
0006-3029
-
Sel'kov, E.E., Avseenko, N.V., and Kirsta, Iu.B.: 'Allosteric regulation in the open futile cycle fructose-6-P-fructose-1,6-P2', Biofizika, 1979, 24, p. 829-835 0006-3029
-
(1979)
Biofizika
, vol.24
, pp. 829-835
-
-
Sel'kov, E.E.1
Avseenko, N.V.2
Kirsta, Iu.B.3
-
3
-
-
0033855963
-
'Regulation of the futile cycle of fructose phosphate in sea mussel'
-
Ibarguren, I., Diaz-Enrich, M.J., Cao, J., Fernandez, M., Barcia, R., Villamarin, J.A., and Ramos-Martinez, J.I.: 'Regulation of the futile cycle of fructose phosphate in sea mussel', Comp. Biochem. Physiol. B Biochem. Mol. Biol., 2000, 126, p. 495-501
-
(2000)
Comp. Biochem. Physiol. B Biochem. Mol. Biol.
, vol.126
, pp. 495-501
-
-
Ibarguren, I.1
Diaz-Enrich, M.J.2
Cao, J.3
Fernandez, M.4
Barcia, R.5
Villamarin, J.A.6
Ramos-Martinez, J.I.7
-
4
-
-
0034663477
-
'Kinetics of a self-amplifying substrate cycle ATP-ADP cycling assay'
-
Valero, E., Varon, R., and Garcia-Carmona, F.: 'Kinetics of a self-amplifying substrate cycle ATP-ADP cycling assay', Biochem. J., 2000, 350, p. 237-243
-
(2000)
Biochem. J.
, vol.350
, pp. 237-243
-
-
Valero, E.1
Varon, R.2
Garcia-Carmona, F.3
-
5
-
-
2942631539
-
'Kinetic analysis of a model for double substrate cycling: Highly amplified ADP (and/or ATP) quantification'
-
0006-3495
-
Valero, E., Varon, R., and Garcia-Carmona, F.: 'Kinetic analysis of a model for double substrate cycling: Highly amplified ADP (and/or ATP) quantification', Biophys. J., 2004, 86, p. 3598-3606 0006-3495
-
(2004)
Biophys. J.
, vol.86
, pp. 3598-3606
-
-
Valero, E.1
Varon, R.2
Garcia-Carmona, F.3
-
6
-
-
0000359208
-
'Kinetic proofreading: A new mechanism for reducing errors in biosynthetic processes requiring high specificity'
-
0027-8424
-
Hopfield, J.J.: 'Ainetic proofreading: a new mechanism for reducing errors in biosynthetic processes requiring high specificity', Proc. Natl. Acad. Sci. USA, 1974, 71, p. 4135-4139 0027-8424
-
(1974)
Proc. Natl. Acad. Sci. USA
, vol.71
, pp. 4135-4139
-
-
Hopfield, J.J.1
-
7
-
-
0016793283
-
'Kinetic amplification of enzyme discrimination'
-
Ninio, J.: 'Kinetic amplification of enzyme discrimination', Biochimie., 1975, 57, p. 587-595
-
(1975)
Biochimie.
, vol.57
, pp. 587-595
-
-
Ninio, J.1
-
8
-
-
4744365694
-
'tRNA selection and kinetic proofreading in translation'
-
Blanchard, S.C., Kim, H.D., Gonzalez, R.L., Chu, S., and Puglisi, J.D.: 'tRNA selection and kinetic proofreading in translation', Nature Struct. Mol. Biol., 2004, 11, p. 1008-1014
-
(2004)
Nature Struct. Mol. Biol.
, vol.11
, pp. 1008-1014
-
-
Blanchard, S.C.1
Kim, H.D.2
Gonzalez, R.L.3
Chu, S.4
Puglisi, J.D.5
-
9
-
-
6444226096
-
'Catalytic wheel as a Brownian motor'
-
1089-5647
-
Rozenbaum, V.M., Yang, D.-Y., Lin, S.H., and Tsong, T.Y.: 'Catalytic wheel as a Brownian motor', J. Phys. Chem. B, 2004, 108, p. 15880-15889 1089-5647
-
(2004)
J. Phys. Chem. B
, vol.108
, pp. 15880-15889
-
-
Rozenbaum, V.M.1
Yang, D.-Y.2
Lin, S.H.3
Tsong, T.Y.4
-
10
-
-
0004097211
-
'Regulation in metabolism'
-
(Wiley, New York)
-
Newsholme, E.A., and Start, C.: 'Regulation in metabolism' (Wiley, New York 1973)
-
(1973)
-
-
Newsholme, E.A.1
Start, C.2
-
11
-
-
14044265753
-
'Stochastic amplification and signaling in enzymatic futile cycle through noise-induced bistablity with oscillation'
-
0027-8424
-
Samoilov, M., Plyasunov, S., and Arkin, A.P.: 'Stochastic amplification and signaling in enzymatic futile cycle through noise-induced bistablity with oscillation', Proc. Natl. Acad. Sci. USA, 2005, 102, p. 2310-2315 0027-8424
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 2310-2315
-
-
Samoilov, M.1
Plyasunov, S.2
Arkin, A.P.3
-
12
-
-
0017154480
-
'Substrate cycles in metabolic regulation and in heat generation'
-
Newsholme, E.A., and Crabtree, B.: 'Substrate cycles in metabolic regulation and in heat generation', Biochem. Soc. Symp., 1976, 41, p. 61-109
-
(1976)
Biochem. Soc. Symp.
, vol.41
, pp. 61-109
-
-
Newsholme, E.A.1
Crabtree, B.2
-
13
-
-
0017041893
-
'Theoretical considerations of the sensitivity conferred by substrate cycles in vivo'
-
Crabtree, B.: 'Theoretical considerations of the sensitivity conferred by substrate cycles in vivo', Biochem. Soc. Trans., 1976, 4, p. 999-1002
-
(1976)
Biochem. Soc. Trans.
, vol.4
, pp. 999-1002
-
-
Crabtree, B.1
-
14
-
-
17244378347
-
'Thermodynamics of stoichiometric biochemical networks in living systems far from equilibrium'
-
Qian, H., and Beard, D.A.: 'Thermodynamics of stoichiometric biochemical networks in living systems far from equilibrium', Biophys. Chem., 2005, 114, p. 213-220
-
(2005)
Biophys. Chem.
, vol.114
, pp. 213-220
-
-
Qian, H.1
Beard, D.A.2
-
15
-
-
0002371029
-
'A systematic approach to describing and analysing metabolic control systems'
-
Crabtree, B., and Newsholme, E.A.: 'A systematic approach to describing and analysing metabolic control systems', Trends Biochem. Sci., 1987, 12, (1), p. 6-12
-
(1987)
Trends Biochem. Sci.
, vol.12
, Issue.1
, pp. 6-12
-
-
Crabtree, B.1
Newsholme, E.A.2
-
16
-
-
0034105138
-
'Slave' metabolites and enzymes'
-
Teusink, B., and Westerhoff, H.V.: 'Slave' metabolites and enzymes', Eur. J. Biochem., 2000, 267, p. 1889-1993
-
(2000)
Eur. J. Biochem.
, vol.267
, pp. 1889-1993
-
-
Teusink, B.1
Westerhoff, H.V.2
-
17
-
-
45949130402
-
'Control of metabolism: What do we have to measure?'
-
Kacser, H., and PoWteous, J.W.: 'Control of metabolism: what do we have to measure?', Trends Biochem. Sci., 1987, 12, (1), p. 5-14
-
(1987)
Trends Biochem. Sci.
, vol.12
, Issue.1
, pp. 5-14
-
-
Kacser, H.1
Porteous, J.W.2
-
18
-
-
0021847426
-
'Metabolic control and its analysis: Additional relationships between elasticities and control coefficients'
-
Fell, D.A., and Sauro, H.M.: 'Metabolic control and its analysis: additional relationships between elasticities and control coefficients', Eur. J. Biochem., 1985, 148, p. 555-561
-
(1985)
Eur. J. Biochem.
, vol.148
, pp. 555-561
-
-
Fell, D.A.1
Sauro, H.M.2
-
19
-
-
0003820984
-
'The regulation of cellular systems'
-
(Chapman & Hall, New York)
-
Heinrich, R., and Schuster, S.: 'The regulation of cellular systems' (Chapman & Hall, New York 1996)
-
(1996)
-
-
Heinrich, R.1
Schuster, S.2
-
20
-
-
0032485905
-
'Increasing the flux in metabolic pathways: A metabolic control analysis perspective'
-
Fell, D.A.: 'Increasing the flux in meAabolic pathways: a metabolic control analysis perspective', Biotech. Bioeng., 1998, 58, p. 121-124
-
(1998)
Biotech. Bioeng.
, vol.58
, pp. 121-124
-
-
Fell, D.A.1
-
21
-
-
0021278674
-
'How do enzyme activities control metabolite concentrations? An additional theorem in the theory of metabolic control'
-
Westerhoff, H.V., and Chen, Y.-D.: 'How do enzyme activities control metabolite concentrations? An additional theorem in the theory of metabolic control', Eur. J. Biochem., 1984, 142, p. 425-430
-
(1984)
Eur. J. Biochem.
, vol.142
, pp. 425-430
-
-
Westerhoff, H.V.1
Chen, Y.-D.2
-
22
-
-
0027469989
-
'Taking enzyme kinetics out of control: Putting control into regulation'
-
Hofmeyr, J.H., Cornish-Bowden, A., and Rohwer, J.M.: 'Taking enzyme kinetics out of control: Putting control into regulation', Eur. J. Biochem., 1993, 212, p. 833-837
-
(1993)
Eur. J. Biochem.
, vol.212
, pp. 833-837
-
-
Hofmeyr, J.H.1
Cornish-Bowden, A.2
Rohwer, J.M.3
-
23
-
-
0029884590
-
'How to recognize monofunctional units in a metabolic system'
-
Rohwer, J.M., Schuster, S., and Westerhoff, H.V.: 'How to recognize monofunctional units in a metabolic system' J. Theoret. Biol., 1996, 179, p. 213-228
-
(1996)
J. Theoret. Biol.
, vol.179
, pp. 213-228
-
-
Rohwer, J.M.1
Schuster, S.2
Westerhoff, H.V.3
-
25
-
-
33746047649
-
'Grand canonical Markov model: A stochastic theory for open nonequilibrium biochemical networks'
-
0021-9606
-
Heuett, W.J., and Qian, HA: 'Grand canonical Markov model: a stochastic theory for open nonequilibrium biochemical networks' J. Chem. Phys., 2006, 124, p. 044110 0021-9606
-
(2006)
J. Chem. Phys.
, vol.124
, pp. 044110
-
-
Heuett, W.J.1
Qian, H.2
-
26
-
-
0031661513
-
'Top-down elasticity analysis and its application to energy metabolism in isolated mitochondria and intact cells'
-
Brand, M.D.: 'Top-down elasticity analysis and its application to energy metabolism in isolated mitochondria and intact cells', Mol. Cell. Biochem., 1998, 184, p. 13-20
-
(1998)
Mol. Cell. Biochem.
, vol.184
, pp. 13-20
-
-
Brand, M.D.1
-
27
-
-
0028836695
-
'The macroworld versus the microworld of biochemical regulation and control'
-
Kholodenko, B.N., and Westerhoff, H.V.: 'The macroworld versus the microworld of biochemical regulation and control' Trends Biochem. Sci., 1995, 20, (2), p. 52-54
-
(1995)
Trends Biochem. Sci.
, vol.20
, Issue.2
, pp. 52-54
-
-
Kholodenko, B.N.1
Westerhoff, H.V.2
-
28
-
-
85012703084
-
'A theoretical background in study of the control of intermediary metabolism'
-
Rolleston, F.S.: 'A theoretical background in study of the control of intermediary metabolism', Curr. Top. Cell. Regul., 1972, 5, p. 47-75
-
(1972)
Curr. Top. Cell. Regul.
, vol.5
, pp. 47-75
-
-
Rolleston, F.S.1
-
29
-
-
0017754837
-
'Metabolic regulation and mathematical models'
-
Heinrich, R., Rapaport, S.M., and Rapaport, T.A.: 'Metabolic regulation and mathematical models', Progr. Biophys. Mol. Biol., 1977, 32, p. 1-82
-
(1977)
Progr. Biophys. Mol. Biol.
, vol.32
, pp. 1-82
-
-
Heinrich, R.1
Rapaport, S.M.2
Rapaport, T.A.3
-
30
-
-
67650040559
-
'Linked functions and reciprocal effects in hemoglobin: A second look'
-
Wyman, J.: 'Linked functions and reciprocal effectA in hemoglobin: a second look', Adv. Protein Chem., 1964, 19, p. 223-286
-
(1964)
Adv. Protein Chem.
, vol.19
, pp. 223-286
-
-
Wyman, J.1
-
31
-
-
0016699207
-
'Macromolecular binding'
-
Schellman, J.A.: 'Macromolecular binding', Biopolymers, 1975, 14, p. 999-1018
-
(1975)
Biopolymers
, vol.14
, pp. 999-1018
-
-
Schellman, J.A.1
-
32
-
-
85012759914
-
'Phosphorylase and the control of glycogen degradation'
-
Fischer, E.H., Heilmeyer, L.M.G., and Haschke, R.H.: 'Phosphorylase and the control of glycogen degradation', Curr. Top. Cell. Regul., 1971, 4, p. 211-251
-
(1971)
Curr. Top. Cell. Regul.
, vol.4
, pp. 211-251
-
-
Fischer, E.H.1
Heilmeyer, L.M.G.2
Haschke, R.H.3
-
33
-
-
0000187410
-
'Conversion of phosphorylase b to phosphorylase a in muscle extracts'
-
Fischer, E.H., and Kreb, E.G.: 'Conversion of phosphorylase b to phosphorylase a in muscle extracts', J. Biol. Chem., 1955, 216, p. 121-133
-
(1955)
J. Biol. Chem.
, vol.216
, pp. 121-133
-
-
Fischer, E.H.1
Kreb, E.G.2
-
34
-
-
0141560467
-
'Thermodynamic and kinetic analysis of sensitivity amplification in biological signal transduction'
-
Qian, H.: 'Thermodynamic and kinetic analysis of sensitivity amplification in biological signal transduction', Biophys. Chem., 2003, 105, p. 585-593
-
(2003)
Biophys. Chem.
, vol.105
, pp. 585-593
-
-
Qian, H.1
-
35
-
-
0036286631
-
'Energy balance for analysis of complex metabolic networks'
-
0006-3495
-
Beard, D.A., Liang, S.-D., and Qian, H.: 'Energy balance for analysis of complex metabolic networks', Biophys. J., 2002, 83, p. 79-86 0006-3495
-
(2002)
Biophys. J.
, vol.83
, pp. 79-86
-
-
Beard, D.A.1
Liang, S.-D.2
Qian, H.3
-
36
-
-
1542327697
-
'Fluorescence correlation spectroscopy with high-order and dual-color correlation to probe nonequilibrium steady-states'
-
0027-8424
-
Qian, H., and Elson, E.L.: 'Fluorescence correlation spectroscopy with high-order and dual-color correlation to probe nonequilibrium steady-states', Proc. Natl. Acad. Sci. USA, 2004, 101, p. 2828-2833 0027-8424
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 2828-2833
-
-
Qian, H.1
Elson, E.L.2
-
37
-
-
12244269687
-
'Near-critical phenomena in intracellular metabolite pools'
-
0006-3495
-
Elf, J., Paulsson, J., Berg, O.G., and Ehrenberg, M.: 'Near-critical phenomena in intracellular metabolite pools', Biophys. J., 2003, 84, p. 154-170 0006-3495
-
(2003)
Biophys. J.
, vol.84
, pp. 154-170
-
-
Elf, J.1
Paulsson, J.2
Berg, O.G.3
Ehrenberg, M.4
-
38
-
-
0039528240
-
'Temperature regulation in bumblebees, Bombus vagans: A field study'
-
0036-8075
-
Heinrich, B.: 'Temperature regulation in bumblebAes, Bombus vagans: a field study', Science, 1972, 175, p. 185-187 0036-8075
-
(1972)
Science
, vol.175
, pp. 185-187
-
-
Heinrich, B.1
-
39
-
-
0030820723
-
'Medical progress: Obesity'
-
Rosenbaum, R.O., and Leibel, J.H.: 'Medical progress: obesity', N. Engl. J. Med., 1997, 337, p. 396-407
-
(1997)
N. Engl. J. Med.
, vol.337
, pp. 396-407
-
-
Rosenbaum, R.L.1
Leibel, J.H.2
-
40
-
-
0038413844
-
'Efficacy and safety of low-carbohydrate diets: A systematic review'
-
Bravata, D.M., Sanders, L., and Huang, J.: Et al. 'Efficacy and safety of low-carbohydrate diets: A systematic review', JAMA, 2003, 289, p. 1837-1850
-
(2003)
JAMA
, vol.289
, pp. 1837-1850
-
-
Bravata, D.M.1
Sanders, L.2
Huang, J.3
-
41
-
-
0033787068
-
'Skeletal muscle respiratory uncoupling prevents diet-induced obesity and insulin resistance in mice'
-
Li, B., Nolte, L.A., Ju, J.-S., Han, D.H., Coleman, T., Holloszy, J.O., and Semenkovich, C.F.: 'Skeletal muscle respiratory uncoupling prevents diet-induced obesity and insulin resistance in mice', Nature Med., 2000, 6, p. 1115-1120
-
(2000)
Nature Med.
, vol.6
, pp. 1115-1120
-
-
Li, B.1
Nolte, L.A.2
Ju, J.-S.3
Han, D.H.4
Coleman, T.5
Holloszy, J.O.6
Semenkovich, C.F.7
-
42
-
-
0016895682
-
'Cellular thermogenesis'
-
Himms-Hagen, J.: 'Cellular thermogenesis', Ann. Rev. Physiol., 1976, 38, p. 315-351
-
(1976)
Ann. Rev. Physiol.
, vol.38
, pp. 315-351
-
-
Himms-Hagen, J.1
-
43
-
-
0025895183
-
'Toward a science of metabolic engineering'
-
0036-8075
-
Bailey, J.E.: 'Toward a science of metabolic engineering' Science, 1991, 252, p. 1668-1675 0036-8075
-
(1991)
Science
, vol.252
, pp. 1668-1675
-
-
Bailey, J.E.1
-
44
-
-
0042991264
-
'Glyceroneogenesis and the triglyceride/fatty acid cycle'
-
Reshef, L., Olswang, Y., Cassuto, H., Blum, B., Croniger, C.M., Kalhan, S.C., Tilghman, S.M., and Hanson, R.W.: 'Glyceroneogenesis and the triglyceride/fatty acid cycle', J. Biol. Chem., 2003, 278, p. 30413-30416
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 30413-30416
-
-
Reshef, L.1
Olswang, Y.2
Cassuto, H.3
Blum, B.4
Croniger, C.M.5
Kalhan, S.C.6
Tilghman, S.M.7
Hanson, R.W.8
-
45
-
-
5044227742
-
'The evolution of molecular biology into systems biology'
-
Westerhoff, H.V., and Palsson, B.Ø.: 'The evolution of molecular biology into systems biology', Nature Biotech., 2004, 22, p. 1249-1252
-
(2004)
Nature Biotech.
, vol.22
, pp. 1249-1252
-
-
Westerhoff, H.V.1
Palsson, B.Ø.2
-
46
-
-
0036213422
-
'Kinetic timing: A novel mechanism for improving the accuracy of GTPase timers in endosome fusion and other biological processes'
-
Li, G.-P., And Qian, H.: 'Kinetic timing: a novel mechanism for improving the accuracy of GTPase timers in endosome fusion and other biological processes', Traffic, 2002, 3, p. 249-255
-
(2002)
Traffic
, vol.3
, pp. 249-255
-
-
Li, G.-P.1
Qian, H.2
-
47
-
-
11144321198
-
'Robustness, stability and efficiency of phage λ genetic switch: Dynamical structure analysis'
-
Zhu, X.-M., Yin, L., Hood, L., and Ao, P.: 'Robustness, stability and efficiency of phage λ genetic switch: Dynamical structure analysis', J. Bioinf. Comput. Biol., 2004, 2, p. 785-817
-
(2004)
J. Bioinf. Comput. Biol.
, vol.2
, pp. 785-817
-
-
Zhu, X.-M.1
Yin, L.2
Hood, L.3
Ao, P.4
-
48
-
-
18144407314
-
'Nonequilibrium thermodynamics and nonlinear kinetics in a cellular signaling switch'
-
0031-9007
-
Qian, H., and Reluga, T.C.: 'Nonequilibrium thermodynamics and nonlinear kinetics in a cellular signaling switch', Phys. Rev. Lett., 2005, 94, p. 028101 0031-9007
-
(2005)
Phys. Rev. Lett.
, vol.94
, pp. 028101
-
-
Qian, H.1
Reluga, T.C.2
-
50
-
-
0003825088
-
'Statistical thermodynamics of nonequilibrium processes'
-
(Springer-Verlag, New York)
-
Keizer, J.: 'Statistical thermodynamics of nonequilibrium processes' (Springer-Verlag, New York 1987)
-
(1987)
-
-
Keizer, J.1
-
51
-
-
57249114484
-
'Mathematical formalism for isothermal linear irreversibility'
-
Qian, H.: 'Mathematical formalism for isothermal linear irreversibility', Proc. R. Soc. A. Math. Phys. Engr. Sci., 2001, 457, p. 1645-1655
-
(2001)
Proc. R. Soc. A. Math. Phys. Engr. Sci.
, vol.457
, pp. 1645-1655
-
-
Qian, H.1
-
52
-
-
24944438976
-
'Structure of stochastic dynamics near fixed points'
-
0027-8424
-
Kwon, C., Ao, P., and Thouless, D.J.: 'Structure of stochastic dynamics near fixed points', Proc. Natl. Acad. Sci. USA, 2005, 102, p. 13029-13033 0027-8424
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 13029-13033
-
-
Kwon, C.1
Ao, P.2
Thouless, D.J.3
-
53
-
-
4143110506
-
'Control of internal and external noise in genetic regulatory networks'
-
Orrell, D., and Bolouri, H.: 'Control of internal and external noise in genetic regulatory networks', J. Theoret. Biol., 2004, 230, p. 301-312
-
(2004)
J. Theoret. Biol.
, vol.230
, pp. 301-312
-
-
Orrell, D.1
Bolouri, H.2
-
54
-
-
0004155427
-
'Biochemistry'
-
2nd (W.H. Freeman, San Francisco)
-
Stryer, L.: 'Biochemistry' 2nd (W.H. Freeman, San Francisco 1981)
-
(1981)
-
-
Stryer, L.1
|