Rhodovulum marinum sp. nov., a novel phototrophic purple non-sulfur alphaproteobacterium from marine tides of Visakhapatnam, India

International Journal of Systematic and Evolutionary Microbiology

Volumn 56, Issue 7, 2006, Pages 1651-1656

  Srinivas, T N R ^a   Kumar, P Anil ^a   Sasikala, Ch ^a   Ramana, Ch V ^b   Suling J ^c   Imhoff, J F ^c  

^a JAWAHARLAL NEHRU TECHNOLOGICAL UNIVERSITY   (India)

^b UNIVERSITY OF HYDERABAD   (India)

^c GEOMAR HELMHOLTZ CENTRE FOR OCEAN RESEARCH KIEL   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIOCHLOROPHYLL A; CARBON; CAROTENOID; HYDROGEN; ORGANIC COMPOUND; RNA 16S; SEA WATER; SODIUM CHLORIDE; SULFIDE; THIAMINE; THIOSULFATE;

ALPHAPROTEOBACTERIA; ARTICLE; AUTOTROPHY; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM ISOLATION; CARBON SOURCE; CELL MEMBRANE; CELL SHAPE; CELL VACUOLE; CONTROLLED STUDY; CULTURE MEDIUM; CYTOPLASM; ELECTRON; ENRICHMENT CULTURE; FERMENTATION; GENE SEQUENCE; GENUS; HALOPHILIC BACTERIUM; HETEROTROPHY; INDIA; INOCULATION; MARINE ENVIRONMENT; MICROMORPHOLOGY; NEW SPECIES; NOMENCLATURE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHOTOTROPHIC BACTERIUM; PRIORITY JOURNAL; RHODOVULUM; RHODOVULUM IODOSUM; RHODOVULUM MARINUM; RHODOVULUM SULFIDOPHILUM; SEASHORE; SEQUENCE ANALYSIS; TIDE; WATER SAMPLING;

CAROTENOIDS; CELL MEMBRANE; CHLOROPHYLL; DNA, BACTERIAL; DNA, RIBOSOMAL; GENES, RRNA; HYDROGEN-ION CONCENTRATION; INDIA; MICROSCOPY, ELECTRON, TRANSMISSION; MICROSCOPY, PHASE-CONTRAST; MOLECULAR SEQUENCE DATA; ORGANIC CHEMICALS; PHYLOGENY; PIGMENTS, BIOLOGICAL; RHODOVULUM; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; SALINE SOLUTION, HYPERTONIC; SEAWATER; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID; TEMPERATURE; THIAMINE; VITAMIN B COMPLEX; WATER MICROBIOLOGY;

ALPHAPROTEOBACTERIA; BACTERIA (MICROORGANISMS); RHODOVULUM; RHODOVULUM IODOSUM; RHODOVULUM SULFIDOPHILUM;

EID: 33746531223     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.64005-0     Document Type: Article

References (26)

1. Arunasri, K., Sasikala, C., Ramana, C. V., Süling, J. & Imhoff, J. F. (2005). Marichromatium indicum sp. nov., a novel purple sulfur gammaproteobacterium from mangrove soil of Goa, India. Int J Syst Evol Microbiol 55, 673-679.
2. Felsenstein, J. (1989). PHYLIP - Phylogenetic Inference Package, version 3.5.1. Distributed by the author. University of Washington, Seattle, USA.
3. Hansen, T. A. & Veldkamp, H. (1973). Rhodopseudomonas sulfidophila, nov. spec., a new species of the purple nonsulfur bacteria. Arch Microbiol 92, 45-58.
4. Heising, S., Dilling, W., Schnell, S. & Schink, B. (1996). Complete assimilation of cysteine by a newly isolated non-sulfur purple bacterium resembling Rhodovulum sulfidophilum (Rhodobacter sulfidophilus). Arch Microbiol 165, 397-401.
5. Hiraishi, A. & Ueda, Y. (1994). Intrageneric structure of the genus Rhodobacter: transfer of Rhodobacter sulfidophilus and related marine species to the genus Rhodovulum gen. nov. Int J Syst Bacteriol 44, 15-23.
6. Hiraishi, A. & Ueda, Y. (1995). Isolation and characterization of Rhodovulum strictum sp. nov. and some other purple nonsulfur bacteria from colored blooms in tidal and seawater pools. Int J Syst Bacteriol 45, 319-326.
7. Imhoff, J. F. (1983). Rhodopseudomonas marina sp. nov., a new marine phototrophic purple bacterium. Syst Appl Microbiol 4, 512-521.
8. Imhoff, J. F. (1988). Anoxygenic phototrophic bacteria. In Methods in Aquatic Bacteriology, pp. 207-240. Edited by B. Austin. Chichester, New York: Wiley.
9. Imhoff, J. F. (2001). Transfer of Rhodopseudomonas acidophila to the new genus Rhodoblastus as Rhodoblastus acidophilus gen. nov., comb. nov. Int J Syst Bacteriol Microbiol 51, 1863-1866.
10. Imhoff, J. F. & Pfennig, N. (2001). Thioflavicoccus mobilis gen. nov., sp. nov., a novel purple sulfur bacterium with bacteriochlorophyll b. Int J Syst Bacteriol Microbiol 51, 105-110.
11. Imhoff, J. F. & Trüper, H. G. (1992). The genus Rhodospirillum and related genera. In the Prokaryotes, 2nd edn, pp. 2141-2155. Edited by A. Balows, H. G. Trüper, M. Dworkin, W. Harder & K.-H. Schleifer. Berlin, Heidelberg, New York: Springer.
12. Imhoff, J. F., Süling, J. & Petri, R. (1998a). Phylogenetic relationships among the Chromatiaceae, their taxonomic reclassification and description of the new genera Allochromatium, Halochromatium, Isochromatium, Marichromatium, Thiococcus, Thiohalocapsa and Thermochromatium. Int J Syst Bacteriol 48, 1129-1143.
13. Imhoff, J. F., Süling, J. & Petri, R. (1998b). Reclassification of species of the spiral-shaped phototrophic purple non-sulfur bacteria of the α-Proteobacteria: description of the new genera Phaeospirillum gen. nov., Rhodovibrio gen. nov., Rhodothalassium gen. nov. and Roseospira gen. nov. as well as transfer of Rhodospirillum fulvum to Phaeospirillum fulvum comb. nov., of Rhodospirillum molischianum to Phaeospirillum molischianum comb. nov., of Rhodospirillum salinarum to Rhodovibrio salinarum comb. nov., of Rhodospirillum sodomense to Rhodovibrio sodomensis comb. nov., of Rhodospirillum salexigens to Rhodothalassium salexigens comb. nov.
14. Jukes, T. H. & Cantor, C. R. (1969). Evolution of protein molecules. In Mammalian Protein Metabolism, pp. 21-132. Edited by H. N. Munro. New York: Academic Press.
15. Karr, E. A., Sattley, W. M., Jung, D. O., Madigan, M. T. & Achenbach, L. A. (2003). Remarkable diversity of phototrophic purple bacteria in a permanently frozen Antarctic lake. Appl Environ Microbiol 69, 4910-4914.
16. Kompantseva, E. I. (1985). New halophilic purple bacteria Rhodobacter euryhalinus sp. nov. Mikrobiologiia 54, 974-982.
17. Madigan, M. T., Jung, D. O., Woese, C. R. & Achenbach, L. A. (2000). Rhodoferax antarcticus sp. nov., a moderately psychrophilic purple non-sulfur bacterium isolated from an Antarctic microbial mat. Arch Microbiol 173, 269-277.
18. Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Biol 3, 208-218.
19. Marmur, J. & Doty, P. (1962). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5, 109-118.
20. Neutzling, O., Imhoff, J. F. & Trüper, H. G. (1984). Rhodopseudomonas adriatica sp. nov., a new species of the Rhodospirillaceae, dependent on reduced sulfur compounds. Arch Microbiol 137, 256-261.
21. Pfennig, N. & Trüper, H. G. (1974). The phototrophic bacteria. In Bergey's Manual of Systematic Bacteriology, 8th edn, pp. 24-75. Edited by R. E. Buchanan & N. E. Gibbons. Baltimore: Williams & Wilkins.
22. Pfennig, N. & Trüper, H. G. (1989). Family Chromatiaceae. In Bergey's Manual of Systematic Bacteriology, vol. 3, pp. 1637-1653. Edited by J. T. Staley, M. P. Bryant. N. Pfennig & J. G. Holt. Baltimore: Williams & Wilkins.
23. Pfennig, N. & Trüper, H. G. (1992). The family Chromatiaceae. In the Prokaryotes. A Handbook on the Biology of Bacteria. Ecophysiology, Isolation, Identification, Applications, 2nd edn, pp. 3200-3221. Edited by A. Balows, H. G. Trüper, M. Dworkin, W. Harder & K.-H. Schleifer. Berlin, Heidelberg & New York: Springer.
24. Straub, K. L., Rainey, F. A. & Widdel, F. (1999). Rhodovulum iodosum sp. nov. and Rhodovulum robiginosum sp. nov., two new marine phototrophic ferrous-iron-oxidizing purple bacteria. Int J Syst Bacteriol 49, 729-735.
25. Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
26. Trüper, H. G. & Pfennig, N. (1981). Isolation of members of the families Chromatiaceae and Chlorobiaceae. In the Prokaryotes: a Handbook on Habitats, Isolation, and Identification of Bacteria, pp. 279-289. Edited by M. P. Starr, H. Stolp, H. G. Trüper, A. Balows & H. G. Schlegel. Berlin: Springer.