Antimicrobial resistance islands: resistance gene clusters in Salmonella chromosome and plasmids

Microbes and Infection

Volumn 8, Issue 7, 2006, Pages 1923-1930

  Miriagou, Vivi ^a   Carattoli, Alessandra ^b   Fanning, Séamus ^c  

^a HELLENIC PASTEUR INSTITUTE   (Greece)

^b ISTITUTO SUPERIORE DI SANITÀ   (Italy)

^c UNIVERSITY COLLEGE DUBLIN   (Ireland)

Author keywords

Antimicrobial resistance; Horizontal genetic transfer; Insertion sequence; Integron; Mobile genetic element; Plasmid; Resistance gene; Salmonella; Transposon

Indexed keywords

2 DEOXYSTREPTAMINE; AMINOGLYCOSIDE; AMPICILLIN; ANTIBIOTIC AGENT; ANTIINFECTIVE AGENT; BETA LACTAMASE; CEFOTAXIME; CHLORAMPHENICOL; FORTIMICIN; KANAMYCIN; SPECTINOMYCIN; STREPTOMYCIN; TETRACYCLINE;

ANTIBIOTIC RESISTANCE; CHROMOSOME ANALYSIS; GENE CLUSTER; GENE INSERTION; GENE LOCUS; GENE SEQUENCE; GENOMIC ISLAND; HOST; HUMAN; INTEGRON; NUCLEOTIDE SEQUENCE; ORGANISM; PLASMID; PRIORITY JOURNAL; SALMONELLA; SHORT SURVEY; TRANSPOSON;

ANTI-BACTERIAL AGENTS; CHROMOSOMES, BACTERIAL; DRUG RESISTANCE, MULTIPLE, BACTERIAL; GENES, BACTERIAL; MULTIGENE FAMILY; R FACTORS; SALMONELLA;

SALMONELLA;

EID: 33746425217     PISSN: 12864579     EISSN: 1769714X     Source Type: Journal    
DOI: 10.1016/j.micinf.2005.12.027     Document Type: Short Survey

References (38)

1. Stellwagen A.E., and Craig N.L. Mobile DNA elements: controlling transposition with ATP-dependent molecular switches. Trends Biochem. Sci. 23 (1998) 486-490
2. Allmeier H., Cresnar B., Greck M., and Schmitt R. Complete nucleotide sequence of Tn1721: gene organization and a novel gene product with features of a chemotaxis protein. Gene 111 (1992) 11-20
3. Pezzella C., Ricci A., DiGiannatale E., Luzzi I., and Carattoli A. Tetracycline and streptomycin resistance genes, transposons, and plasmids in Salmonella enterica isolates from animals in Italy. Antimicrob. Agents Chemother. 48 (2004) 903-908
4. Frech G., and Schwarz S. Plasmid-encoded tetracycline resistance in Salmonella enterica subsp. enterica serovars Choleraesuis and Typhimurium: identification of complete and truncated Tn1721 elements. FEMS Microbiol. Lett. 176 (1999) 97-103
5. Pasquali F., Kehrenberg C., Manfreda G., and Schwarz S. Physical linkage of Tn3 and part of Tn1721 in a tetracycline and ampicillin resistance plasmid from Salmonella Typhimurium. J. Antimicrob. Chemother. 55 (2005) 562-565
6. Sundin G.W., and Bender C.L. Expression of the strA-strB streptomycin-resistance genes in Pseudomonas syringae and Xanthomonas campestris and characterization of IS6100 in X. campestris. Appl. Environ. Microbiol. 61 (1995) 2891-2897
7. Carattoli A., Filetici E., Villa L., Dionisi A.M., Ricci A., and Luzzi I. Antibiotic resistance genes and Salmonella genomic island 1 in Salmonella enterica serovar Typhimurium isolated in Italy. Antimicrob. Agents Chemother. 46 (2002) 2821-2828
8. Sundin G.W., Monks D.E., and Bender C.L. Distribution of the streptomycin-resistance transposon Tn5393 among philloplane and soil bacteria from managed agricultural habitats. Can. J. Microbiol. 41 (1995) 792-799
9. Galimand M., Sabtcheva S., Courvalin P., and Lambert T. Worldwide disseminated armA aminoglycoside resistance methylase gene is borne by composite transposon Tn1548. Antimicrob. Agents Chemother. 49 (2005) 2949-2953
10. Gonzalez-Zorn B., Teshager T., Casas M., Porrero M.C., Moreno M.A., Courvalin P., and Dominguez L. armA and aminoglycoside resistance in Escherichia coli. Emerg. Infect. Dis. 11 (2005) 954-956
11. Partridge S.R., Recchia G.D., Stokes H.W., and Hall R.M. Family of class 1 integrons related to In4 from Tn1696. Antimicrob. Agents Chemother. 45 (2001) 3014-3020
12. Villa L., Visca P., Tosini F., Pezzella C., and Carattoli A. Composite integron array generated by insertion of an ORF341-type integron within a Tn21-like element. Microb. Drug Resist. 8 (2002) 1-7
13. Miko A., Pries K., Schroeter A., and Helmuth R. Multiple-drug resistance in d-tartrate-positive Salmonella enterica serovar Paratyphi B isolates from poultry is mediated by class 2 integrons inserted into the bacterial chromosome. Antimicrob. Agents Chemother. 47 (2003) 3640-3643
14. Mahillon J., Leonard C., and Chandler M. IS elements as constituents of bacterial genomes. Res. Microbiol. 150 (1999) 675-687
15. Bouallegue-Godet O., Ben Salem Y., Fabre L., Demartin M., Grimont P.A., Mzoughi R., and Weill F.X. Nosocomial outbreak caused by Salmonella enterica serotype Livingstone producing CTX-M-27 extended-spectrum beta-lactamase in a neonatal unit in Sousse, Tunisia. J. Clin. Microbiol. 43 (2005) 1037-1044
16. Weill F.X., Lailler R., Praud K., Kerouanton A., Fabre L., Brisabois B., Grimont P.A., and Cloeckaert A. Emergence of extended spectrum beta-lactamase (CTX-M-9)-producing multiresistant strains of Salmonella enterica serotype Virchow in poultry and humans in France. J. Clin. Microbiol. 42 (2004) 5767-5773
17. Weill F.X., Perrier-Gros-Claude J.D., Demartin M., Coignard S., and Grimont P.A. Characterization of extended spectrum beta-lactamase (CTX-M-15)-producing strains of Salmonella enterica isolated in France and Senegal. FEMS Microbiol. Lett. 238 (2004) 353-358
18. Humeniuk C., Arlet G., Gautier V., Grimont P., Labia R., and Philippon A. Beta-lactamases of Kluyvera ascorbata, probable progenitors of some plasmid-encoded CTX-M types. Antimicrob. Agents Chemother. 46 (2002) 3045-3049
19. Batchelor M., Hopkins K., Threlfall E.J., Clifton-Hadley F.A., Stallwood A.D., Davies R.H., and Liebana E. blaCTX-M genes in clinical Salmonella isolates recovered from humans in England and Wales from 1992 to 2003. Antimicrob. Agents Chemother. 49 (2005) 1319-1322
20. Romero L., Lopez L., Marti{dotless}nez-Marti{dotless}nez L., Guerra B., Hernandez J.R., and Pascual A. Characterization of the first CTX-M-14-producing Salmonella enterica serotype Enteritidis isolate. J. Antimicrob. Chemother. 53 (2004) 1113-1114
21. Poirel L., Cabanne L., Vahaboglu H., and Nordmann P. Genetic environment and expression of the extended spectrum β-lactamase blaPER-1 gene in Gram-negative bacteria. Antimicrob. Agents Chemother. 49 (2005) 1708-1713
22. Fey P.D., Safranek T.J., Rupp M.E., Dunne E.F., Ribot E., Iwen P.C., Bradford P.A., Angulo F.J., and Hinrichs S.H. Ceftriaxone-resistant Salmonella infections acquired by a child from cattle. N. Engl. J. Med. 342 (2000) 1242-1249
23. Carattoli A., Tosini F., Giles W.P., Rupp M.E., Hinrichs S.H., Angulo F.J., Barrett T.J., and Fey P.D. Characterization of plasmids carrying CMY-2 from expanded-spectrum cephalosporin-resistant Salmonella strains isolated in the United States between 1996 and 1998. Antimicrob. Agents Chemother. 46 (2002) 1269-1272
24. Winokur P.L., Vonstein D.L., Hoffman L.J., Uhlenhopp E.K., and Doern G.V. Evidence for transfer of CMY-2 AmpC β-lactamase plasmids between Escherichia coli and Salmonella isolates from food animals and humans. Antimicrob. Agents Chemother. 45 (2001) 2716-2722
25. Gupta A., Fontana J., Crowe C., Bolstorff B., Stout A., Van Duyne S., Hoekstra M.P., Whichard J.M., Barrett T.J., and Angulo F.J. Emergence of multidrug-resistant Salmonella enterica serotype Newport infections resistant to expanded-spectrum cephalosporins in the United States. J. Infect. Dis. 188 (2003) 1707-1716
26. CMY-2 from multiple Salmonella plasmid backbones. Antimicrob. Agents Chemother. 48 (2004) 2845-2852
27. Chiu C.H., Su L.H., Chu C., Chia J.H., Wu T.L., Lin T.Y., Lee Y.S., and Ou J.T. Isolation of Salmonella enterica serotype Choleraesuis resistant to ceftriaxone and ciprofloxacin. Lancet 363 (2004) 1285-1286
28. Wain J., Diem Nga L.T., Kidgell C., James K., Fortune S., Song Diep T., Ali T., O'Gaora P., Parry C., Parkhill J., Farrar J., White N.J., and Dougan G. Molecular analysis of IncH1 antimicrobial resistance plasmids from Salmonella serovar Typhi strains associated with typhoid fever. Antimicrob. Agents Chemother. 47 (2003) 2732-2739
29. Parkhill J., Dougan G., James K.D., Thomson N.R., Pickard D., Wain J., Churcher C., Mungall K.L., Bentley S.D., Holden M.T., Sebaihia M., Baker S., Basham D., Brooks K., Chillingworth T., Connerton P., Cronin A., Davis P., Davies R.M., Dowd L., White N., Farrar J., Feltwell T., Hamlin N., Haque A., Hien T.T., Holroyd S., Jagels K., Krogh A., Larsen T.S., Leather S., Moule S., O'Gaora P., Parry C., Quail M., Rutherford K., Simmonds M., Skelton J., Stevens K., Whitehead S., and Barrell B.G. Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18. Nature 413 (2001) 848-852
30. Sherburne C.K., Lawley T.D., Gilmore M.W., Blattner F.R., Burland V., Grotbeck E., Rose D.J., and Taylor D.E. The complete DNA sequence and analysis of R27, a large IncH1 plasmid from Salmonella typhi that is temperature sensitive for transfer. Nucleic Acids Res. 28 (2000) 2177-2186
31. Daly M., Villa L., Pezzella C., Fanning S., and Carattoli A. Comparison of multi-drug resistance gene regions between two geographically unrelated Salmonella serotypes. J. Antimicrob. Chemother. 55 (2005) 558-561
32. Colonna B., Bernardini M., Micheli G., Maimone F., Nicoletti M., and Casalino M. The Salmonella Wien virulence plasmid pZM3 carries Tn1935, a multiresistance transposon containing a composite IS1936-kanamycin resistance element. Plasmid 20 (1988) 221-231
33. Lindstedt B.A., Heir E., Nygard I., and Kapperud G. Characterization of class 1 integrons in clinical strains of Salmonella enterica subsp. enterica serovars Typhimurium and Enteritidis from Norwegian hospitals. J. Med. Microbiol. 52 (2003) 141-149
34. Villa L., and Carattoli A. Integrons and transposons on the Salmonella Typhimurium virulence plasmid. Antimicrob. Agents Chemother. 49 (2005) 1194-1197
35. Guerra B., Soto S., Helmuth R., and Mendoza M.C. Characterization of a self-transferable plasmid from Salmonella enterica serotype Typhimurium clinical isolates carrying two integron-borne gene cassettes together with virulence and drug resistance genes. Antimicrob. Agents Chemother. 46 (2002) 2977-2981
36. Villa L., Pezzella C., Tosini F., Visca P., Petrucca A., and Carattoli A. Multiple-antibiotic resistance mediated by structurally related IncL/M plasmids carrying an extended-spectrum beta-lactamase gene and a class 1 integron. Antimicrob. Agents Chemother. 44 (2000) 2911-2914
37. Miriagou V., Carattoli A., Tzelepi E., Villa L., and Tzouvelekis L.S. IS26-associated In4-type integrons forming multiresistance loci in enterobacterial plasmids. Antimicrob. Agents Chemother. 49 (2005) 3541-3543
38. Preston K.E., Kacica M.A., Limberger R.J., Archinal W.A., and Venezia R.A. The resistance and integrase genes of pACM1, a conjugative multiple-resistance plasmid, from Klebsiella oxytoca. Plasmid 37 (1997) 105-118