Impact of clam and mussel farming on benthic metabolism and nitrogen cycling, with emphasis on nitrate reduction pathways

Marine Ecology Progress Series

Volumn 315, Issue , 2006, Pages 151-165

  Nizzoli, Daniele ^a   Welsh, David T ^b   Fano, Elisa Anna ^c   Viaroli, Pierluigi ^a  

^a UNIVERSITY OF PARMA   (Italy)

^b GRIFFITH UNIVERSITY   (Australia)

^c UNIVERSITY OF FERRARA   (Italy)

Author keywords

Aquaculture impacts; Biodeposition; Denitrification; Dissimilatory nitrate reduction to ammonium; Mytilus galloprovincialis; Nitrification; Nutrient cycles; Tapes philippinarum

Indexed keywords

BENTHIC ENVIRONMENT; CLAM CULTURE; METABOLISM; MUSSEL CULTURE; NITRATE; NITROGEN CYCLE; REDUCTION;

EURASIA; EUROPE; ITALY; PO DELTA; SACCA DI GORO; SOUTHERN EUROPE; VENETO;

BIVALVIA;

EID: 33746101879     PISSN: 01718630     EISSN: None     Source Type: Journal    
DOI: 10.3354/meps315151     Document Type: Article

References (68)

1. An S, Gardner WS (2002) Dissimilatory nitrate reduction to ammonium (DNRA) as a nitrogen link, versus denitrification as a sink in a shallow estuary (Laguna Madre/Baffin Bay, Texas). Mar Ecol Prog Ser 237:41-50
2. Andersen FO, Kristensen E (1988) The influence of macrofauna on estuarine benthic community metabolism: a microcosm study. Mar Biol 99:591-603
3. Anderson LG, Hall POJ, Iverfeldt A, Van Der Loeff MMR, Sundby B, Westerlund SFG (1986) Benthic respiration measured by total carbonate production. Limnol Oceanogr 31:319-329
4. APHA (American Public Health Association) (1975). Standard methods for the examination of water and wastewaters, 14th edn. APHA, Washington, DC
5. Bartoli M, Nizzoli D, Viaroli P, Turolla E, Castaldelli G, Fano EA, Rossi R (2001) Impact of Tapes philippinarum farming on nutrient dynamics and benthic respiration in the Sacca di Goro. Hydrobiologia 455:202-212
6. Baudinet D, Alliot E, Berland B, Grenz C, Plante-Cuny MR, Plante R, Salen-Picard C (1990) Incidence of mussel culture on biogeochemical fluxes at the sediment-water interface. Hydrobiogia 207:187-196
7. Berg P, Rysgaard S, Funch P, Sejr MK (2001) Effects of bioturbation on solids and solutes in marine sediments. Aquat Microb Ecol 26:81-94
8. Blackburn TH (1996) Nitrogen gas flux from sediments: insights from simulation modelling. Aquat Microb Ecol 10:209-211
9. Blackburn TH, Blackburn ND (1993a) Rates of microbial processes in sediments. Phil Trans R Soc Lond A 344:49-58
10. Blackburn TH, Blackburn ND (1993b) Coupling of cycles and global significance of sediment diagenesis. Mar Geol 113:101-110
11. Bonin P, Omnes P, Chalamet A (1998) Simultaneous occurrence of denitrification and nitrate ammonification in sediments of the French Mediterranean Coast. Hydrobiologia 389:169-182
12. Bower CE, Holm Hansen T (1980) A salicylate-hypochlorite method for determining ammonia in seawater. Can J Fish Aquat Sci 37:794-798
13. Brunet RC, Garcia-Gil LJ (1996) Sulfide-induced dissimilatory nitrate reduction to ammonia in anaerobic freshwater sediments. FEMS Microbiol Ecol 21:131-138
14. Caffrey JM, Sloth NP, Kaspar HF, Blackburn TH (1993) Effect of organic loading on nitrification and denitrification in a marine sediment microcosm. FEMS Microbiol Ecol 12:159-167
15. Castaldelli G, Mantovani S, Welsh DT, Rossi R, Mistri M, Fano EA (2003) Impact of commercial clam harvesting on water column and sediment physicochemical characteristics and macrobenthic community structure in a lagoon (Sacca di Goro) of the Po River Delta. Chem Ecol 2/3:161-171
16. Childs CR, Rabalais NN, Turner RE, Proctor LM (2002) Sediment denitrification in the Gulf of Mexico zone of hypoxia. Mar Ecol Prog Ser 240:285-290
17. Christensen PB, Nielsen LP, Revsbech NP, Sørensen J (1989) Microzonation of denitrification activity in stream sediments as studied with a combined oxygen nitrous oxide sensor. Appl Environ Microbiol 55:1234-1241
18. Christensen PB, Rysgaard S, Sloth NP, Dalsgaard T, Schwaeter S (2000) Sediment mineralization, nutrient fluxes, denitrification and dissimilatory nitrate reduction to ammonium in an estuarine fjord with sea cage trout farms. Aquat Microb Ecol 21:73-84
19. Christensen PB, Glud RN, Dalsgaard T, Gillespie P. (2003) Impacts of long line mussel farming on oxygen and nitrogen dynamics and biological communities of coastal sediments. Aquaculture 218:567-588
20. Dahlback B, Gunnarsson LAH (1981) Sedimentation and sulfate reduction under a mussel culture. Mar Biol 63:269-275
21. Dalsgaard T, Bak F (1994) Nitrate reduction in a sulfate-reducing bacterium, Desulfovibrio desulfiricans, isolated from rice paddy soil: sulfide inhibition, kinetics and regulation. Appl Environ Microbiol 60:291-297
22. 2 or nitrate by sulfate-reducing bacteria. Arch Microbiol 158:93-99
23. Doering PH, Kelly JR, Oviatt CA, Sowers T (1987). Effect of the hard clam Mercenaria mercenaria on benthic fluxes of inorganic nutrients. Mar Biol 94:377-383
24. Eisenmann E, Beuerie J, Sulger K, Kroneck PMH, Schumacher W (1995) Lithotrophic growth of Sulforosprillum delianum with sulfide as electron donor coupled to respiratory reduction of nitrate to ammonia. Arch Microbiol 164:180-185
25. FAO (Food and Agriculture Organization of the United States) (2003) The state of world fisheries and aquaculture 2002. Food and Agriculture Organization of the United States, Rome
26. Gilbert F, Souchu P, Bianchi M Bonin P (1997) Influence of shellfish farming activities on nitrification, nitrate reduction to ammonium and denitrification at the water-sediment interface of the Thau lagoon, France. Mar Ecol Prog Ser 151:143-153
27. Goldman JC, Dennett MR (1991) Ammonium regeneration and carbon utilization by marine bacteria grown on mixed substrates. Mar Biol 109:369-378
28. Graf G, Rosenberg R (1997) Bioresuspension and biodeposition: a review. J Mar Systs 11:269-27
29. Grant J, Hatcher A, Scott DB, Pocklington P, Schaffer CT, Winters GV (1995) A multidisciplinary approach to evaluating impacts of shellfish aquaculture on benthic communities. Estuaries 18:124-144
30. Grenz C, Hermin MN, Baudinet D, Daumas R (1990) In situ biochemical and bacterial variation of sediments enriched with mussel biodeposits. Hydrobiologia 207:153-160
31. Hansen K, King GM, Kristensen E (1996) Impact of the soft-shell clam Mya arenaria on sulfate reduction in an intertidal sediment. Aquat Microb Ecol 10:181-194
32. Jensen KM, Cox RP (1992) Effects of sulfide and low redox potential on the inhibition of nitrous oxide reduction by acetylene in Pseudomonas nautical. FEMS Microbiol Lett 96:13-18
33. Jørgensen BB (1982) Mineralization of organic matter in the sea bed - the role of sulfate reduction. Nature 296:643-645
34. Jørgensen KS (1989) Annual pattern of denitrification and nitrate ammonification in estuarine sediment. Appl Environ Microbiol 55:1841-1847
35. Joye SB, Hollibaugh JT (1995) Influence of sulphide inhibition of nitrification on nitrogen regeneration in sediments. Science 270:623-625
36. Kaiser MJ, Laing I, Utting SD, Burnell GM (1998) Environmental impacts of bivalve mariculture. J Shelf Res 17:59-66
37. Kaspar HF, Gillespie PA, Boyer IC, MacKenzie AL (1985) Effect of mussel aquaculture on the nitrogen cycle and benthic communities in Knepuru Sound, Marlborough Sounds, New Zealand. Mar Biol 85:127-136
38. Kaspar HF, Hall GH, Holland AJ (1988) Effects of sea cage salmon farming on sediment nitrification and dissimilatory nitrate reduction. Aquaculture 70:333-344
39. Keith SM, Macfarlane GT, Herbert RA (1982) Dissimilatory nitrate reduction by a strain of Clostridium butyricum isolated from estuarine sediments. Arch Microbiol 132:62-66
40. Knowles R (1990) Acetylene inhibition technique: development, advantages and potential problems. In: Revsbech NP, Sørensen J (eds) Denitrification in soil and sediment. Plenum Publishing Corporation, New York, p 151-166
41. Kristensen E. (2000) Organic matter diagenesis at the oxic/anoxic interface in coastal marine sediments, with emphasis on the role of burrowing animals. Hydrobiologia 426:1-24
42. Kristensen E, Jensen MH, Andersen TK (1985) The impact of polychaete (Nereis virens Sars) burrows on nitrification and nitrate reduction in estuarine sediments. J Exp Mar Biol Ecol 85:75-91
43. Magni P, Montani S, Takada C, Tsutsumi H (2000) Temporal scaling and relevance of bivalve nutrient excretion on a tidal flat of the Seto Sea, Japan. Mar Ecol Prog Ser 198:139-155
44. + and animal irrigation. Mar Ecol Prog Ser 121:157-169
45. Mazouni N (2004) Influence of suspended oyster cultures on nitrogen regeneration in a coastal lagoon (Thau, France). Mar Ecol Prog Ser 276:103-113
46. Mazouni N, Gaertner JC, Deslous-Paoli JM, Landrein S, Geringer d'Oedenberg M (1996) Nutrient and oxygen exchanges at the water-sediment interface in a shellfish farming lagoon (Thau, France). J Exp Mar Biol Ecol 203:92-113
47. Mitchell GJ, Jones JG, Cole JA (1986) Distribution and regulation of nitrate and nitrite reduction by Desulfovibrio and Desulfatomaculum species. Arch Microbiol 144:35-40
48. Naylor RL, Goldburg RJ, Primavera JH, Kautsky N and 6 others (2000) Effect of aquaculture on world fish supplies. Nature 405:1017-1024
49. Nielsen LP (1992) Denitrification in sediment determined from nitrogen isotope pairing. FEMS Microbiol Ecol 86:357-362
50. Nizzoli D (2003) Regolazione dei processi biogeochimica in ambiente marini costieri con elevate densitá della fauna bentonica. PhD thesis, University of Parma
51. Pelegrí SP, Blackburn TH (1995) Effect of bioturbation by Neries sp., Mya arenaria and Cerastoderma sp. on nitrification and denitrification in estuarine sediments. Ophelia 42:289-299
52. 15N techniques. In: Alef K, Nannipieri P (eds) Methods in applied soil microbiology. Academic Press, London, p 287-310
53. Risgaard-Petersen N, Rysgaard S, Revsbech N (1995) Combined microdiffusion-hypobromite oxidation method for determining nitrogen-15 isotope in ammonium. Soil Sci Soc Am J 59:1077-1080
54. Sfriso A, Pavoni B, Marcomini A, Orio AA (1992) Macroalgae, nutrient cycles and pollutants in the lagoon of Venice. Estuaries 15:517-528
55. Sloth NP, Blackburn TH, Hansen LS, Risgaard-Petersen N, Lomstein BA (1995) Nitrogen cycling in sediments with different organic loading. Mar Ecol Prog Ser 116:163-170
56. Sokal RR, Rohlf FJ (1995) Biometry. W.H. Freeman and Company, New York
57. Stouthammer AH (1979) The search for correlation between theoretical and experimental growth yields. Int Rev Biochem 21:1-47
58. Tiedje JM (1988) Ecology of denitrification and dissimilatory nitrate reduction to ammonium. In: Zehender AJB (ed) Biology of anaerobic microorganisms. Wiley, New York, p 179-244
59. Tiedje JM, Sexstone AJ, Myrold DD, Robinson JA (1982) Denitrification: ecological niches, competition and survival. Antonie van Leeuwenhoek J Microbiol 48:569-583
60. Viaroli P, Azzoni R, Bartoli M, Giordani G, Tajé L (2001) Evolution of the trophic conditions and dystrophic outbreaks in the Sacca di Goro lagoon (Northern Adriatic Sea). In: Faranda EM, Guglielmo L, Spezie G (eds) Mediterranean ecosystems: structures and processes. Springer-Verlag Italia, Milano, p 467-475
61. Viaroli P, Bartoli M, Giordani G, Azzoni R, Nizzoli D (2003) Short term changes of benthic fluxes during clam harvesting in a lagoon (Sacca di Goro, Po river Delta). Chem Ecol 19:189-206
62. Vollenweider RA, Rinaldi A, Montanari G. (1992) Eutrophication, structure and dynamics of a marine coastal system: results of a ten year monitoring along the Emilia-Romagna coast (Northwest Adriatic Sea). In: Vollenweider RA, Marchetti R, Viviani R (eds) Marine coastal eutophication. Elsevier, Amsterdam, p 63-106
63. Welsh DT (2003) It's a dirty job but someone has to do it: The role of marine benthic macrofauna in organic matter turnover and nutrient recycling to the water column. Chem Ecol 19:321-342
64. Welsh DT, Castaldelli G (2004) Bacterial nitrification activity directly associated with isolated benthic marine animals. Mar Biol 144:1029-1037
65. Welsh DT, Bartoli M, Nizzoli D, Castaldelli G, Riou SA, Viaroli P (2000) Denitrification, nitrogen fixation, community primary productivity and inorganic-N and oxygen fluxes in an intertidal Zostera noltii meadow. Mar Ecol Prog Ser 208:51-65
66. 2O. Mar Biol 139:1029-1036
67. Williams RJP (1981) Physico-chemical aspects of inorganic element transfer through membranes. Phil Trans R Soc Lond B 294:57-74
68. Yamuro M, Koike I (1994) Diel changes of nitrogen species in surface and overlying water of an estuarine lake in summer: evidence for benthic-pelagic coupling. Limnol Oceanogr 39:1726-1733