Caenorhabditis elegans dpy-14: An essential collagen gene with unique expression profile and physiological roles in early development

Molecular Genetics and Genomics

Volumn 275, Issue 6, 2006, Pages 527-539

  Gallo, Marco ^a   Mah, Allan K ^a   Johnsen, Robert C ^a   Rose, Ann M ^b   Baillie, David L ^a  

^a SIMON FRASER UNIVERSITY   (Canada)

^b UNIVERSITY OF BRITISH COLUMBIA   (Canada)

Author keywords

Ciliated neurons; col 59; Collagen; dpy 14; Hypodermis

Indexed keywords

COLLAGEN; LECTIN;

ARTICLE; CAENORHABDITIS ELEGANS; DEVELOPMENT; EMBRYO DEVELOPMENT; GENE CONSTRUCT; GENE EXPRESSION; GENE FUNCTION; GENETIC TRANSCRIPTION; HYPODERMA; MORPHOLOGY; MUTATION; NERVE CELL; NONHUMAN; PHENOTYPE; PHYSIOLOGY; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN EXPRESSION; SYNCYTIUM; SYNTHESIS; WATER PERMEABILITY;

AMINO ACID SEQUENCE; ANIMALS; ANIMALS, GENETICALLY MODIFIED; CAENORHABDITIS ELEGANS; CAENORHABDITIS ELEGANS PROTEINS; GENE EXPRESSION PROFILING; MOLECULAR SEQUENCE DATA; MUTATION; PROMOTER REGIONS (GENETICS); SEQUENCE HOMOLOGY, AMINO ACID;

CAENORHABDITIS ELEGANS;

EID: 33746072268     PISSN: 16174615     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00438-006-0110-3     Document Type: Article

References (47)

1. Ansley SJ, Badano JL, Blacque OE, Hill J, Hoskins BE, Leitch CC, Kim JC, Ross AJ, Eichers ER, Teslovich TM, Mah AK, Johnsen RC, Cavender JC, Lewis RA, Leroux MR, Beales PL, Katsanis N (2003) Basal body dysfunction is a likely cause of pleiotropic Bardet-Biedl syndrome. Nature 425:628-633
2. Bargmann CI, Horvitz HR (1991) Control of larval development by chemosensory neurons in Caenorhabditis elegans. Science 251:1243-1246
3. Bargmann CL, Hartweg E, Horvitz HR (1993) Odorant-selective genes and neurons mediate olfaction in C. elegans. Cell 74:515-527
4. Bella J, Eaton M, Brodsky B, Berman HM (1994) Crystal and molecular structure of a collagen-like peptide at 1.9 Å resolution. Science 266:75-81
5. Brenner S (1974) The genetics of Caenorhabditis elegans. Genetics 77:71-94
6. Culotti JG, Russell RL (1978) Osmotic avoidance defective mutants of the nematode Caenorhabditis elegans. Genetics 90:243-256
7. Du H, Gu G, William CM, Chalfie M (1996) Extracellular proteins needed for C. elegans mechanosensation. Neuron 16:183-194
8. Dusenberry DB, Sheridan RE, Russell RL (1975) Chemotaxis-defective mutants of the nematode Caenorhabditis elegans. Genetics 80:297-309
9. von Ehrenstein G, Schierenberg E (1980) Cell lineages and development of Caenorhabditis elegans and other nematodes. In: Zuckerman BM (ed) Nematodes as biological models. Academic, New York, pp 10-11
10. Emtage L, Gu G, Hartwieg E, Chalfie M (2004) Extracellular proteins organize the mechanosensory channel complex in C. elegans touch receptor neurons. Neuron 44:795-807
11. Gilleard JS, Barry JD, Johnstone IL (1997) cis regulatory requirements for hypodermal cell-specific expression of the Caenorhabditis elegans cuticle collagen gene dpy-7. Mol Cell Biol 17:2301-2311
12. Harrow ID, Gration KAF (1985) Mode of action of the anthelmintics morantel, pyrantel and levamisole on muscle cell membrane of the nematode Ascaris suum. Pestic Sci 16:662-672
13. Hobert O (2002) PCR fusion-based approach to create reporter gene constructs for expression analysis in transgenic C. elegans. Biotechniques 32:728-730
14. Inouye S, Tsuji FI (1994) Evidence for redox forms of the Aequorea green fluorescent protein. FEBS Lett 351:211-214
15. Johnstone IL (2000) Cuticle collagen genes expression in Caenorhabditis elegans. Trends Genet 16:21-27
16. Ko FCF, Chow KL (2000) Mutations with sensory ray defect unmask cuticular glycoprotein antigens in Caenorhabditis elegans male tail. Dev Growth Differ 42:69-77
17. Kramer JC (1994) Structures and functions of collagens in Caenorhabditis elegans. FASEB J 8:329-336
18. Kramer JM (1997) Extracellular matrix. In: Riddle DL, Blumenthal T, Meyer BJ, Priess JR (eds) C. elegans II. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, pp 471-500
19. Kramer RZ, Bella J, Mayville P, Brodsky B, Berman HM (1999) Sequence dependent conformational variations of collagen triple-helical structure. Nat Struct Biol 6:454-457
20. Li X, Zhao X, Fang Y, Jiang X, Duong T, Connie F, Huang C, Kain SR (1998) Generation of destabilized green fluorescent protein as a transcription reporter. J Biol Chem 273:34970-34975
21. Link CD, Ehrenfels CW, Wood WB (1988) Mutant expression of male copulatory bursa surface markers in Caenorhabditis elegans. Development 103:485-495
22. Link CD, Silverman MA, Breen M, Watt KE, Dames SA (1992) Characterization of Caenorhabditis elegans lectin-binding mutants. Genetics 151:867-881
23. Maeda I, Kohara Y, Yamamoto M, Sugimoto A (2001) Large-scale analysis of gene function in Caenorhabditis elegans by high-throughput RNAi. Curr Biol 11:171-176
24. McKay SJ, Johnsen R, Khattra J, Asano J, Baillie DL, Chan S, Dube N, Fang L, Goszczynski B, Ha E, Halfnight E, Hollebakken R, Huang P, Hung K, Jensen V, Jones SJM, Kai H, Li D, Mah A, Marra M, McGhee J, Newbury R, Pouzyrev A, Riddle DL, Sonnhammer E, Tian H, Tu D, Tyson JR, Vatcher G, Warner A, Wong K, Zhao Z, Moerman DG (2003) Gene expression profiling of cells, tissues, and developmental stages of the nematode C. elegans. Cold Spring Harb Symp Quant Biol 68:159-169
25. Meeks M, Bush A (2000) Primary ciliary dyskinesia (PCD). Pediatr Pulm 29:307-316
26. Mello CC, Kramer JM, Stinchcomb D, Ambros V (1991) Efficient gene transfer in C. elegans: extrachromosomal maintenance and integration of transforming sequences. EMBO J 10:3959-3970
27. Myllyharju J, Kivirikko KI (2004) Collagens, modifying enzymes and their mutations in humans, flies and worms. Trends Genet 20:33-43
28. Novelli J, Ahmed S, Hodgin J (2004) Gene interactions in Caenorhabditis elegans define DPY-31 as a candidate procollagen C-proteinase and SQT-3/ROL-4 as its predicted major target. Genetics 168:1259-1273
29. Perkins LA, Hedgecock EM, Thomson JN, Culotti JG (1986) Mutant sensory cilia in the nematode Caenorhabditis elegans. Dev Biol 117:456-487
30. Pierce-Shimomura JT, Faumont S, Gaston MR, Pearson BJ, Lockery SR (2001) The homeobox gene lim-6 is required for distinct chemosensory representations in C. elegans. Nature 412:566
31. Podbilewicz B, White JG (1994) Cell fusions in the developing epithelia of C. elegans. Dev Biol 161:408-424
32. Prasad SS, Starr TV, Rose AM (1993) Molecular characterization in the dpy-14 region identifies the S-adenosylhomocysteine hydrolase gene in Caenorhabditis elegans. Genome 36:57-64
33. Prockop DJ, Kirivikko KI (1995) Collagens: molecular biology, diseases, and potentials for therapy. Annu Rev Biochem 64:403-434
34. Starich TA, Herman RK, Kari CK, Yeh W, Schackwitz WS, Schuyler MW, Collet J, Thomas JH, Riddle DL (1995) Mutations affecting the chemosensory neurons of Caenorhabditis elegans. Genetics 139:171-188
35. Stinchcomb DT, Shaw JE, Carr SH, Hirsh D (1985) Extrachromosomal DNA transformation of Caenorhabditis elegans. Mol Cell Biol 5:3484-3496
36. Sulston JE, Schierenberg E, White JG, Thomson JN (1983) The embryonic cell lineage of the nematode Caenorhabditis elegans. Dev Biol 100:64-119
37. Thacker C, Srayko M, Rose AM (2000) Mutational analysis of bli-4/kpc-4 reveals critical residues required for preprotein convertase function in C. elegans. Gene 252:15-25
38. Thein MC, McCormack G, Winter AD, Johnstone IL, Schoemaker CB, Page AP (2003) Caenorhabditis elegans exoskeleton collagen COL-19: an adult-specific marker for collagen modification and assembly, and the analysis of organismal morphology. Dev Dyn 226:523-539
39. Vowels JJ, Thomas JH (1994) Multiple chemosensory defects in daf-11 and daf-21 mutants of Caenorhabditis elegans. Genetics 138:303-316
40. Ward S, Thomson N, White JG, Brenner S (1975) Electron microscopical reconstruction of the anterior sensory anatomy of the nematode Caenorhabditis elegans. J Comp Neurol 160:313-337
41. Ware RW, Clark D, Crossland K, Russell RL (1975) The nerve ring of the nematode Caenorhabditis elegans: sensory input and motor output. J Comp Neurol 162:71-110
42. Winter AD, Page AP (2000) Prolyl 4-hydroxylase is an essential procollagen-modifying enzyme required for exoskeleton formation and the maintenance of body shape in the nematode Caenorhabditis elegans. Mol Cell Biol 20:4084-4093
43. Wood WB (ed) (1988a) The nematode Caenorhabditis elegans. Cold Spring Harbor Monograph series 17. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, p 509
44. Wood WB (ed) (1988b) The nematode Caenorhabditis elegans. Cold Spring Harbor Monograph series 17. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, p 12
45. Wright KA (1980) Nematode sense organs. In: Zuckerman BM (ed) Nematodes as biological models. Academic, New York, pp 237-295
46. Yochem J, Gu T, Han M (1998) A new marker for mosaic analysis in Caenorhabditis elegans indicates a fusion between hyp6 and hyp7, two major components of hypodermis. Genetics 149:1323-1334
47. Zhang YJ, O'Neal WK, Randell SH, Blackburn K, Mayer MB, Boucher RC, Ostrowski LEJ (2002) Identification of dynein heavy chain 7 as an inner arm component of human cilia that is synthesized but not assembled in a case of primary ciliary dyskinesia. J Biol Chem 277:17906-17915