QTL mapping for leaf and neck blast resistance in Khao Dawk Mali105 and Jao Horn Nin recombinant inbred lines

ScienceAsia

Volumn 32, Issue 2, 2006, Pages 133-142

  Noenplab, Apichart ^a   Vanavichit, Apichart ^b   Toojinda, Theerayut ^b   Sirithunya, Pattama ^c   Tragoonrung, Somvong ^b   Sriprakhon, Saengchai ^b   Vongsaprom, Chanakan ^b  

^a Phltsanulok Rice Research Center   (Thailand)

^b KASETSART UNIVERSITY   (Thailand)

^c Lampang Agricultural Research and Training Center   (Thailand)

Author keywords

Blast resistance; QTL mapping; Recombinant inbred lines

Indexed keywords

EID: 33746036424     PISSN: 15131874     EISSN: None     Source Type: Journal    
DOI: 10.2306/scienceasia1513-1874.2006.32.133     Document Type: Article

References (38)

1. Disthaporn S (1994) Current Rice Blast Epidemics and Their Management in Thailand. In: Rice Blast Disease (Edited by RS Zeigler RS Leong SA and Teng PS), pp 333-42. CAB International, Wallingford, Oxon, U.K.
2. Kiyosawa S (1982) Genetic and epidemiological modeling of breakdown of plant disease resistance. Annual Review of phytopathology 20, 93-117.
3. Ahn SW (1994) International collaboration on breeding for resistance to rice blast. In: Rice Blast Disease (Edited by Zeigler RS Leong SA and Teng PS), pp 137-53. CAB International, Wallingford, Oxon, U.K.
4. Marchetti MA (1983) Dilatory resistance to rice blast in U.S.A. rice. Phytopathology 73, 645-9.
5. Kinoshita T (1991) Report of the Committee on Gene Symbolization, Nomenclature, and Linkage Groups. Rice Genet Newsl 8, 2-37.
6. McCouch S.R Nelson RJ Tohme J and Zeigler RS (1994) Mapping of blast resistance genes in rice. In: Rice Blast Disease (Edited by Zeigler RS Leong SA and Teng PS), pp 167-86. CAB International, Wallingford, Oxon, U.K.
7. Wu JL Sinha PK Variar M Zheng KL Leach JE Courtois B and Leaung H (2004) Association between molecular markers and blast resistance in an advanced backcross population of rice. Theor Appl Genet 108, 1024-32.
8. Zuuang JY Chai RY Ma WB Lu J Jin MZ and Zheng KL (1997) Genetic analysis of the blast resistance at vegetative and reproductive stages in rice. Rice Genet Newsl 14, 16-64.
9. Sirithunya P Tragoonrung S Vanavichit A Pa-in N Vongsaprom C and Toojinda T (2002) Quantitative trait loci associated with leaf and neck blast resistance in Recombinant Inbred Line population of rice (Oryza sativa L.) DNA Research 9, 79-88.
10. Wang GL Mackill DJ Bonmam JM McCouch SR Champoux MC and Nelson RT (1994) RFLP mapping of genes conferring complete and partial resistance to blast in durably resistant rice cultivar, Theor Appl Genet 136, 1421-34.
11. Toojinda T Siangliw M Tragoonrung S and Vanavichit A (2003) Molecular genetics of submergence tolerance in rice. Annals of Botany 91, 243-53.
12. th International Rice Research Center, Manila, Philippines, 1-52.
13. McCouch SR Temnykn S Lukashova A Coburn J DeClerck G Cartinhour S Harrington S and Thomsan M et al (2001) Microsatellite markers in rice: abundance, diversity, and applications. In: Rice Genetics IV (edited by Khush GS Brar DS Hardy B), pp 117-35. International Rice Research Institute, Los Banos, Philippines.
14. Akagi H Yokozeki Y Inagaki A and Fujimura T (1996) Microsatellite DNA markers for rice chromosomes. Theor Appl Genet 94, 61-7.
15. Panaud O Chen X and McCouch SR (1996) Development of microsatellite markers and characterization of simple sequence length polymorphisms (SSLP) in rice (Oryza sativa L). Mol Gen Genet 252, 597-607.
16. Lander ES Green P Abrahamson J Barlow A Daly WJ Lincoln SE and Newburg L (1987) Mapmaker: an interactive computer package for constructing primary genetic linkage maps of experimental and natural population, Genetics 1, 174-81.
17. Kurata N Nagamura Y Yamamoto K Harushima Y Sue N Wu J Antonio BA and Shomura A el al (1994) A 300 kilobase interval genetic map of rice including 883 expressed sequences. Nature Genet 8, 365-72.
18. Chen X Temnykh S Xu Y Cho YG and McCouch SR (1997) Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.), Theor Appl Genet 95, 553-67.
19. Tinker NA and Marther DE (1995a) Method for QTL analysis with progeny replicated in multiple environment. Journal of Agricultural of Genomics 1:1. http://www.eabi-publishing.org/ jag/papers95/paper!95/indexp 195.html
20. Tinker NA and Marther DE (1995b) MQTL:Software for simplified composite interval mapping of QTL in multiple environments, Journal of Agricultural Genomics 1:2. http:// www.cabi-publishing.org/jag/papers95_/paper295/ indexp295.html
21. Teng PS Klein-Gebbinck HW and Pinnschmidt H (1991) An analysis of the blast pathosystem to guide modeling and forecasting. In: Rice Blast Modeling and Forecasting, pp 1-30. International Rice Research Institute, Los Banos, The Philippines.
22. Zhuang JY Ma WB Wu JL Chai RY Lu J Fan YY Jim MZ and Leung H et al (2002) Mapping of leaf and neck blast resistance genes with resistance gene analog, RAPD and AFLP in rice. Euphytica 128, 363-70.
23. Michelmore RW Hulburt SH Landry BS and Leung H (1987) Towards a molecular understanding of lettuce downy mildew. In: Genetics and Plant Pathogenesis. (Edited by Day PR. and Jellis Gj), pp 221-31. Blackwell Scientific publications, Oxford.
24. Pryor T (1987) Origin and structure of disease resistance genes in plants. Trends Genet 3, 157-61.
25. Wang Z Taramino G Yang D Liu G Tingey SV Miao GH and Wang GL (2001) Rice ESTs with disease-resistance gene- or defense-response gene-like sequences mapped to regions containing major resistance genes or QTLs. Mol Genet Genomics 265, 302-10.
26. Baker B Zambryski P Staskawicz B and Dinesh-kumar SP (1997) Signaling in plant-microbe interactions. Science 276, 726-32.
27. Prashanth GB Hitalmani S Srinivasachary A Shadakshari K and Shashidhar HE (2002) Genetic marker associated with field resistance to leaf and neck blast across location in rice (Oryza sativa L). Rice Genet News 15, 128-30.
28. Chen S Wang L Que Z Pan R and Pan Q (2005) Genetic and physical mapping of Pi37(t), a new gene conferring resistance to rice blast in the famous cultivar St. No.l. Theor Appl Genet 111, 1563-70.
29. Wen N Chu Z and Wang S (2003) Three types of defense-responsive genes are involved in resistance to bacterial blight and fungal blast disease in rice. Mol Genet Genomics 269, 331-9.
30. Hittamani S Parco A Mew TV Zeigler RS and Huang N (2000) Fine mapping and DNA marker assisted pyramiding of the major genes for blast resistance in rice. Theor Appl Genet 100, 1121-8.
31. Inukai T Zeigler RS Sakarung S Bronson M Dung LV Kinoshita T and Nelson RJ (1996) Development of pre-isogenic lines for rice blast-resistance by marker-aided selection from a recombinant inbred populations. Theor Appl Genet 93, 560-7.
32. Tabien RE Li Z Paterson AH Marchetti MA Stansel JW and Pinson SRM (2000) Mapping of four major rice blast resistance genes from Lemont and Teqing and evaluation of their combinatorial effect for field resistance. Theor Appl Genet 101, 1215-25.
33. Li ZK Luo LJ Mei HW Paterson AH Zhao DB Zhong DB Wang YP and Yu XQ et al (1999) A "defeated" rice resistance gene acts as a QTL against a virulent strain of Xanthomonas oryzae pv. Oryzae. Mol Genet Genomics 261, 58-63.
34. Kiyosawa S (1984) Establishment of differential varieties for pathogenicity test of rice blast fungus. Rice Genet Newsl 1, 95-7.
35. Inukai T Nelson RJ Zeigler RS Sarkarung S Makill DJ Bonman JM Takamure I and Kinoshita T (1994) Allelism of blast resistance genes in near isogenic of rice. Phytopathology 84, 1278-83.
36. Mew TV Parco SA Hittalmas S Inukai T Nelson RJ Zeigler RS and N. Huang N (1994) Find mapping of major genes for blast resistance in rice. Rice Genet Newsl 11, 126-8.
37. Imbe T Oba S Yanoria MJT and Tsunematsu H (1997) A new gene for blast resistance in rice cultivar, IR24. Rice Genet newsl 14, 60-1.
38. Sirithunya P Toojinda T Pimpisitthavorn S and Sriprakon S (2001) Genetic interaction between resistance genes of rice and diversity of blast pathogen in Thailand. In: 2001 Annual Research Conference on Rice and Temperate Cereals, pp 36-7. Rice Research Institute. Department of Agriculture.