Spatiotemporal structure of genetic variation of a spreading plant metapopulation on dynamic riverbanks along the Meuse River

Heredity

Volumn 96, Issue 6, 2006, Pages 471-478

  Jacquemyn, H ^a   Honnay, O ^a   Van Looy, K ^b   Breyne, P ^b  

^a UNIVERSITY OF LEUVEN   (Belgium)

^b RESEARCH INSTITUTE FOR NATURE AND FOREST INBO   (Belgium)

Author keywords

Gene flow; Long distance seed dispersal; Metapopulation; Population genetic structure; River dynamics

Indexed keywords

FRESH WATER;

GENETIC VARIATION; METAPOPULATION; PLANT; RIVER BANK; SEED DISPERSAL; SPATIOTEMPORAL ANALYSIS;

ARTICLE; BELGIUM; BRASSICACEAE; ENVIRONMENT; GENETIC POLYMORPHISM; GENETIC VARIABILITY; GENETICS; POPULATION GENETICS;

BELGIUM; BRASSICACEAE; ENVIRONMENT; FRESH WATER; GENETICS, POPULATION; POLYMORPHISM, GENETIC; VARIATION (GENETICS);

EURASIA; EUROPE; MEUSE RIVER; WESTERN EUROPE;

SISYMBRIUM AUSTRIACUM;

EID: 33745851165     PISSN: 0018067X     EISSN: 13652540     Source Type: Journal    
DOI: 10.1038/sj.hdy.6800825     Document Type: Article

References (57)

1. Austerlitz F, Garnier-Géré PH (2003). Modelling the impact of colonization on genetic diversity and differentiation of forest trees: interaction of life cycle, pollen flow and seed long-distance dispersal. Heredity 90: 282-290.
2. Boedeltje G, Bakker JP, Ten Brinke A, Van Groenendaal JM, Soesbergen M (2004). Dispersal phenology of hydrochorous plants in relation to discharge, seed release time and buoyancy of seeds: the flood pulse concept supported. J Ecol 92: 786-796.
3. Bohrer G, Nathan R, Volis S (2005). Effects of long-distance dispersal for metapopulation survival and genetic structure at ecological time and spatial scales. J Ecol 93: 1029-1040.
4. Cain ML, Milligan BG, Strand AE (2000). Long-distance seed dispersal in plant populations. Am J Bot 87: 1217-1227.
5. Clark JS (1998). Why trees migrate so fast: confronting theory with dispersal biology and the paleorecord. Am Nat 152: 204-224.
6. DeWoody J, Nason JD, Smith M (2004). Inferring demographic processes from the genetic structure of a metapopulation of Boltonia decurrens (Asteraceae). Conserv Genet 5: 603-617.
7. Ehrlén J, Eriksson O (2000). Dispersal limitation and occupancy in forest herbs. Ecology 81: 1667-1674.
8. Excoffier L, Smouse PE, Quattro JM (1992). Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479-491.
9. Felsenstein J (1993). Phylip, Phylogentic inference package, Version 3.5.7. Department of Genetics, University of Washington: Seattle. http://evoluation.genetics.washington.edu/phylip. html.
10. Giles BE, Goudet J (1997). Genetic differentiation in Silene dioica metapopulations: estimation of spatiotemporal effects in a successional plant species. Am Nat 149: 507-526.
11. Hanski I (2001). Population dynamic consequences of dispersal in local population and metapopulations. In: Clobert J, Denchin E, Dhondt AA, Nichols JD (eds) Dispersal. Oxford University Press: Oxford. pp 283-298.
12. Hegi G (1986). Illustrierte Flora von Mittle-Europa, Band IV, Teil 1. P. Parey: Berlin.
13. Higgins SI, Richardson DM (1999). Predicting plant migration rates in a changing world: the role of long-distance dispersal. Am Nat 153: 464-475.
14. Higgins SI, Cain ML (2002). Spatially realistic metapopulation models and the colonization-competition trade-off. J Ecol 90: 616-626.
15. Higgins SI, Nathan R, Cain ML (2003). Are long-distance dispersal events in plants usually caused by nonstandard means of dispersal? Ecology 84: 1945-1956.
16. Holsinger KE, Lewis PO, Dey DK (2002). A Bayesian approach to inferring population structure from dominant markers. Mol Ecol 11: 1157-1164.
17. Holsinger KE, Wallace LE (2004). Bayesian approaches for the analysis of population genetic structure: an example from Platanthera leucophaea (Orchidaceae). Mol Ecol 13: 887-894.
18. Hutchison DW, Templeton AR (1999). Correclation of pairwise genetic and geographic distance measures: inferring the relative influences of gene flow and drift on the distribution of genetic variability. Evolution 53: 1898-1914.
19. Ibrahim K, Nichols RA, Hewitt GM (1996). Spatial patterns of genetic variation generated by different forms of dispersal during range expansion. Heredity 77: 282-291.
20. Imbert E, Lefèvre F (2002). Dispersal and gene flow of Populus nigra (Salicaceae) along a dynamic river system. J Ecol 91: 447-456.
21. Jacquemyn H, Butaye J, Hermy M (2003). Influence of environmental and spatial variables on regional distribution of forest plant species in a fragmented and changing landscape. Ecography 26: 768-776.
22. Jacquemyn H, Honnay O, Galbusera P, Roldán-Ruiz I (2004). Genetic structure of the forest herb Primula elatior in a changing landscape. Mol Ecol 13: 211-219.
23. Jäkäläniemi A, Tuomi J, Siikamäki P, Kilpiä A (2005). Colonization-extinction and patch dynamics of the perennial riparian plant, Silene tatarica. J Ecol 93: 670-680.
24. Katul GG, Porporato A, Nathan R, Siqueira M, Soons MB, Poggi D et al (2005). Mechanistic analytical models for long-distance seed dispersal by wind. Am Nat 166: 368-381.
25. Krauss SK (2000). Accurate genetic diversity estimates from amplified fragment length polymorphism. Mol Ecol 9: 1241-1245.
26. Kudoh H, Whigham DF (1997). Microgeographic genetic structure and gene flow in Hibiscus moscheutos (Malvaceae) populations. Am J Bot 84: 1285-1293.
27. Kudoh H, Whigham DF (2001). A genetic analysis of hydrologically dispersed seeds of Hibiscus moscheutos (Malvaceae). Am J Bot 88: 588-593.
28. Le Corre V, Kremer A (1998). Cumulative effects of founding events during colonization on genetic diversity and differentiation in an island and stepping-stone model. J Evol Biol 11: 495-512.
29. Litrico I, Ronfort J, Verlaques R, Thompson JD (2005). Spatial structure of genetic variation and primary succession in the pioneer tree species Anthirea borbonica on La Réunion. Mol Ecol 14: 1575-1584.
30. Lonsdale WM (1993). Rates of spread of an invading species Mimosa pigra in northern Australia. J Ecol 81: 513-521.
31. Lynch M, Milligan BG (1994). Analysis of population genetic structure with RAPD markers. Mol Ecol 3: 91-99.
32. Lytle DA, Poff NL (2004). Adaptation to natural flow regimes. Trends Ecol Evol 19: 94-100.
33. Mantel N (1967). The detection of disease clustering and a generalized regression approach. Cancer Res 27: 209-220.
34. McCauley DE (1991). Genetic consequences of local population extinction and recolonization. Trends Ecol Evol 6: 5-8.
35. McCauley DE (1994). Contrasting the distribution of chloroplast DNA and allozyme polymorphism among local populations of Silene alba: Implications for studies of gene flow in plants. P Natl Acad Sci USA 91: 8127-8131.
36. McCauley DE, Raveill J, Antonovics J (1995). Local founding events as determinants of genetic structure in a plant metapopulation. Heredity 75: 630-636.
37. Menges ES (1990). Population viability analysis for an endangered plant. Conserv Biol 4: 41-62.
38. Nathan R, Perry G, Cronin JT, Strand AE, Cain ML (2003). Methods for estimating long-distance dispersal. Oikos 103: 261-273.
39. Neubert MG, Caswell H (2000). Demography and dispersal: calculation and sensitivity analysis of invasion speed for structured populations. Ecology 81: 1613-1628.
40. Ouborg NJ (1993). Isolation, population size and extinction: the classical and metapopulation approaches applied to vascular plants along the Dutch Rhine-system. Oikos 66: 298-308.
41. Ouborg NJ, Piquot Y, van Groenendael JM (1999). Population genetics, molecular markers and the study of dispersal in plants. J Ecol 87: 551-568.
42. Pannell JR, Charlesworth B (2000). Effects of metapopulation processes on measures of genetic diversity. Philos Trans Roy Soc Ser B 355: 1851-1864.
43. Peakall R, Smouse PE (2005). GenAlEx V6: Genetic Analysis in Excel. Population Genetic Software for Teaching and Research. Australian National University, Canberra: Australia. http://www.anu.edu.au/BoZo/GenAlEx/.
44. Richards CM, Church S, McCauley DE (1999). The influence of population size and isolation on gene flow by pollen in Silene alba. Evolution 53: 63-73.
45. Slatkin M (1977). Gene flow and genetic drift in a species subject to frequent local extinctions. Theor Popul Biol 12: 253-262.
46. Slatkin M (1993). Isolation by distance in equilibrium and non-equilibrium populations. Evolution 47: 264-279.
47. Steffan-Dewenter I, Tscharntke T (1999). Effects of habitat isolation on pollinator communities and seed set. Oecologia 121: 432-440.
48. Tackenberg O (2003). Modeling long distance dispersal of plant diasporas by wind. Ecol Monogr 73: 173-189.
49. Tero N, Aspi J, Siikamäki P, Jäkäläniemi A, Tuomi J (2003). Genetic structure and gene flow in a metapopulation of an endangered plant species, Silene tatarica. Mol Ecol 12: 2073-2085.
50. Vekemans X, Beauwens T, Lemaire M, Roldán-Ruiz I (2002). Data from amplified fragment length polymorphism (AFLP) markers show indication of size homoplasy and of a relationship between degree of homoplasy and fragment size. Mol Ecol 11: 139-151.
51. Van Landuyt W, Hoste I, Vanhecke L, Van den Bremt P, Vercruysse W, De Beer D (2006). Atlas van de Flora van Vlaanderen en het Brussels gewest; Nationale Plantentuin en het Instituut voor Natuur-en Bosonderzoek i.s.m. Flo.Wer vzw.
52. Verheyen K, Vellend M, Van Calster H, Peterken G, Henny M (2004). Metapopulation dynamics in changing landscapes: a new spatially realistic model for forest plants. Ecology 85: 3302-3312.
53. Vos P, Hogers R, Bleeker M, Reijans M, Van de Lee T, Hornes M et al (1995). AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res 23: 4407-4414.
54. Wade MJ, McCauley DE (1988). Extinction and recolonization: their effects on the genetic differentiation of local populations. Evolution 42: 995-1005.
55. Waser NM, Vickery RK, Price MV (1982). Patterns of seed dispersal and population differentiation in Mimulus guttatus. Evolution 36: 753-761.
56. Whitlock MC, McCauley DE (1990). Some population genetic consequences of colony formation and extinction: genetic correlations within breeding groups. Evolution 44: 1717-1724.
57. Zhivotovsky LA (1999). Estimating population structure in diploids with multilocus dominant DNA markers. Mol Ecol 8: 907-913.