Antimicrobial compounds produced by Actinomadura sp. AC104 isolated from an Algerian Saharan soil

Canadian Journal of Microbiology

Volumn 52, Issue 4, 2006, Pages 373-382

  Badji, B ^a,b   Zitouni, A ^a,b   Mathieu, F ^c   Lebrihi, A ^c   Sabaou, N ^a,b  

^a Ecole Normale Superieure de Kouba   (Algeria)

^b Scientific and Technical Research Centre for Arid Areas (CRSTRA)   (Algeria)

^c UNIVERSITÉ DE TOULOUSE   (France)

Author keywords

Actinomadura; Antimicrobial compounds; Saharan soil; Taxonomy

Indexed keywords

BACTERIA; CHROMATOGRAPHIC ANALYSIS; FUNGI; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; SOILS; VITAMINS;

ACTINOMADURA; ANTIMICROBIAL COMPOUNDS; SAHARAN SOIL; TAXONOMY;

ANTIBIOTICS;

AGAR; ANTIBIOTIC AGENT; RIBOSOME DNA;

ANTIBIOTICS; ANTIMICROBIAL ACTIVITY; FUNGICIDE; SOIL MICROORGANISM;

ACTINOMADURA; ALGERIA; ANTIFUNGAL ACTIVITY; ANTIMICROBIAL ACTIVITY; ARTICLE; BACTERIUM CULTURE; BACTERIUM ISOLATION; DNA DETERMINATION; DRUG ACTIVITY; DRUG ISOLATION; FERMENTATION MEDIUM; INFRARED SPECTROMETRY; MASS SPECTROMETRY; MORPHOLOGICAL TRAIT; PRIORITY JOURNAL; PROTON NUCLEAR MAGNETIC RESONANCE; REVERSED PHASE HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; THIN LAYER CHROMATOGRAPHY;

ACTINOMYCETALES; ALGERIA; ANTI-BACTERIAL AGENTS; ANTI-INFECTIVE AGENTS; ANTIFUNGAL AGENTS; CULTURE MEDIA, CONDITIONED; DESERT CLIMATE; FUNGI; GRAM-POSITIVE BACTERIA; HYDROGEN-ION CONCENTRATION; MAGNETIC RESONANCE SPECTROSCOPY; MASS SPECTROMETRY; MICROBIAL SENSITIVITY TESTS; MICROSCOPY, ELECTRON, TRANSMISSION; PHYLOGENY; RNA, RIBOSOMAL, 16S; SOIL MICROBIOLOGY; TEMPERATURE;

AFRICA; ALGERIA; NORTH AFRICA; SAHARA;

ACTINOMADURA; ACTINOMADURA SP.; FUNGI; NEGIBACTERIA; POSIBACTERIA;

EID: 33745827811     PISSN: 00084166     EISSN: None     Source Type: Journal    
DOI: 10.1139/W05-132     Document Type: Article

References (37)

1. Athalye, M., Goodfellow, M., Lacey, J., and White, R.P. 1985. Numerical classification of Actinomadura and Nocardiopsis. Int. J. Syst. Bacteriol. 35: 86-98.
2. Becker, B., Lechevalier, M.P., Gordon, R.E., and Lechevalier, H.A. 1964. Rapid differentiation between Nocardia and Streptomyces by paper chromatography of whole cell hydrolysates. J. Appl. Microbiol. 12: 421-423.
3. Berdy, J., Aszalos, A., and McNitt, K.L. 1987. Handbook of antibiotic compounds. XIII. Vols. 1, 2, 3. Microbial metabolites. CRC Press, Boca Raton, Fla.
4. Betina, V. 1973. Bioautography in paper and thin layer chromatography and its scope in the antibiotic field. J. Chromatogr. 78: 41-51.
5. Buckingham, J. 1997. Dictionary of natural products. Chapman and Hall/CRC Press, London, England.
6. Bycroft, B.W. 1988. Dictionary of antibiotics and related substances. Chapman and Hall/CRC, London, England.
7. Dairi, T., Hamano, Y., Furumai, T., and OKI, T. 1999. Development of a self-cloning system for Actinomadura verrucosospora and identification of polyketide synthase genes essential for production of the angucyclic antibiotic pradimicin. Appl. Environ. Microbiol. 65: 2703-2709.
8. Euzeby, J.P. 2005. List of bacterial names with standing in nomenclature - genus Actinomadura [online]. Available from http://www.bacterio.cict.fr./a/ actinomadura.html [cited 14 May 2005].
9. Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39: 783-791.
10. Goodfellow, M., Alderson, G., and Lacey, J. 1979. Numerical taxonomy of Actinomadura and related actinomycetes. J. Gen. Microbiol. 112: 95-111.
11. Gordon, R.E., and Barnett, D.A. 1977. Resistance to rifampicin and lysozyme of isolates of some species of Mycobacterium and Nocardia as a taxonomic tool. Int. J. Syst. Bacteriol. 27: 176-178.
12. Gordon, R.E., Barnett, D.A., Handarhan, J.E., and Hor-Nay-Pang, C. 1974. Nocardia coeliaca, Nocardia autrophica and the nocardin isolates. Int. J. Syst. Bacteriol. 24: 54-63.
13. Gupte, M., Kulkarni, P., and Ganguli, B.N. 2002. Antifungal antibiotics. Appl. Microbiol. Biotechnol. 58: 46-57.
14. Hayakawa, M., and Nonomura, H. 1987. Humic acid - vitamins agar, a new medium for the selective isolation of soil actinomycetes. J. Ferment. Technol. 65: 501-509.
15. Hayakawa, H., Momose, Y., Kajiura, T., Yamazaki, T., Tamura, T., Hatano, K., and Nonomura, H. 1995. A selective isolation method for Actinomadura viridis in soil. J. Ferment. Bioeng. 79: 287-289.
16. Hedge, V., Patel, M., Horan, A., Gullo, V., Marquez, J., Gunnarsson, I., Gentile, F., Loebenber, D., King, A., Puar, M., and Pramanik, B. 1992. Macrolactams: a novel class of antifungal antibiotics produced by Actinomadura spp. SC1776 and SCC 1777. J. Antibiot. 45: 624-632.
17. Jukes, T.H., and Cantor, C.R. 1969. Evolution of protein molecules. In Mammalian protein metabolism. Vol. 3. Edited by H.N. Munro. Academic Press, New York. pp. 21-132.
18. Kakinuma, S., Susuki, H., Hatori, M., Saitoh, K., Hasegawa, T., Furumai, T., and Oki, T. 1993. Biosynthesis of the pradimicin family of antibiotics. III. Biosynthetic pathway of both pradimicins and benanomicins. J. Antibiot. 46: 430-440.
19. Kumar, S., Tamura, K., and Nei, M. 2004. MEGA3: Integrated software for molecular evolutionary genetic analysis and sequence alignment. Briefings Bioinf. 5: 150-163.
20. Kuster, E., and Williams, S.T. 1964. Selection of media for isolation of streptomycetes. Nature, 202: 928-929.
21. Lazzarini, A., Cavaletti, L., Toppo, G., and Marinelli, F. 2001. Rare genera of actinomycetes as potential producers of new antibiotics. Antonie Leeuwenhoek, 79: 399-405.
22. Lechevalier, H.A., and Lechevalier, M.P. 1970. Composition of whole-cell hydrolysates as a criterion in the classification of aerobic actinomycetes. In The Actinomycetales. Edited by H. Prauser. Fischer G. Verlag, Jena. pp. 393-404.
23. Lechevalier, M.P., de Bievre, C., and Lechevalier, H.A. 1977. Chemotaxonomy of aerobic actinomycetes. Phospholipid composition. Biochem. Syst. Ecol. 5: 249-264.
24. Marchai, N., and Bourdon, J.L. 1973. Milieux de culture et identification biochimique des bactéries. Doin, Paris.
25. Meyer, J. 1989. Genus Actinomadura Lechevalier and Lechevalier 1970. In Bergey's manual of systematic bacteriology. Vol. 4. Edited by S.T. Williams, M.E Sharpe, and J.G. Holt. Wilkins, Baltimore, Md. pp. 2511-2526.
26. Minnikin, D.E., Patel, P.V., Alshamahony, L., and Goodfellow, M. 1977. Polar lipid composition in the classification of Nocardia and related bacteria. Int. J. Syst. Bacteriol. 27: 104-117.
27. Minnikin, D.E., Hutchinson, I.G., Caldicott, A.B., and Goodfellow, M. 1980. Thin layer chromatography of methanolysates of mycolic acid containing bacteria. J. Chromatogr. 188: 221-233.
28. Miyadoh, S. 1993. Research on antibiotic screening in Japan over the last decade: a producing microorganism approach. Actinomycetologica, 7: 100-106.
29. Nakamura, G., and Isono, E.K. 1983. A new species of Actinomadura producing a polyether antibiotic, cationomycin. J. Antibiot. 36: 1468-1472.
30. Preobrazenskaya, T.P., Lavrova, N.V., Ukholina, R.S., and Nechaeva, N.P. 1975. Isolation of new species of Actinomadura on selective media with streptomycin and bruneomycin. Antibiotiki, 22: 404-409.
31. Sabaou, N., Hacène, H., Bennadji, A., Bennadji, H., and Bounaga, N. 1992. Distribution quantitative et qualitative des actinomycètes dans les horizons de sol de surface et profonds d'une palmeraie algérienne. Can. J. Microbiol. 38: 1066-1073.
32. Sabaou, N., Boudjella, H., Bennadji, A., Mostefaoui, A., Zitouni, A., Lamari, L., Bennadji, H., Lefebvre, G., and Germain, P. 1998. Les sols du Sahara algérien, source d'actinomycètes rares producteurs d'antibiotiques. Sécheresse, 9: 147-153.
33. Saitou, N., and Nei, M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
34. Sanglier, J.J., Haag, H., Huck, T.A., and Fehr, T. 1996. Review of actinomycetes compounds 1990-1995. Expert Opin. Invest. Drugs, 5: 207-223.
35. Shirling, E.B., and Gottlieb, D. 1966. Methods for characterization of Streptomyces species. Int. J. Syst. Bacteriol. 16: 313-340.
36. Thompson, J.D., Higgins, D.G., and Gibson, T.J. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighing, position specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680.
37. Zakharova, O.S., Zenova, G.M., and Zvyagintsev, D.G. 2003. Some approaches to the selective isolation of actinomycetes of the genus Actinomadura from soil. Microbiology, 72: 110-113.