-
1
-
-
0025183708
-
Basic local alignment search tool
-
S.F. Altschul S.F., W. Gish, W. Miller, E.W. Myers, and D.J. Lipman. Basic local alignment search tool. In J. Mol. Biol., 215:403-10, 1990.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
S. F. Altschul, T. L. Madden, A. A. Schaeer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. In Nucleic Acids Research, 25:3389-3402, 1997.
-
(1997)
Nucleic Acids Research
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaeer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
0029251238
-
Efficient implementation of suffix trees
-
A. Andersson and S. Nilsson. Efficient implementation of suffix trees. In Softw. Pract. Exp., 25(2):129-141, 1995.
-
(1995)
Softw. Pract. Exp.
, vol.25
, Issue.2
, pp. 129-141
-
-
Andersson, A.1
Nilsson, S.2
-
4
-
-
0022663527
-
The Boyer-Moore-Galil string searching strategies revisited
-
A. Apostolico and R. Giancarlo. The Boyer-Moore-Galil string searching strategies revisited. In SIAM Journal on Computing 15(1):98-105, 1986.
-
(1986)
SIAM Journal on Computing
, vol.15
, Issue.1
, pp. 98-105
-
-
Apostolico, A.1
Giancarlo, R.2
-
6
-
-
0004287639
-
-
Laboratoire d'Informatique de Rouen, Université de Rouen. Last accessed: April, 2005
-
Christian Charras and Thierry Lecroq. ESMAJ: Exact String Matching Algorithms, Animation in Java. http://wwwigm.univ-lv.frl~lecroq/string/index. html. Laboratoire d'Informatique de Rouen, Université de Rouen. Last accessed: April, 2005.
-
ESMAJ: Exact String Matching Algorithms, Animation in Java
-
-
Charras, C.1
Lecroq, T.2
-
9
-
-
33745600161
-
Algorithms on strings, trees and sequences: Computer science and computational biology
-
D. Gusfield. Algorithms on strings, trees and sequences: computer science and computational biology. Cambridge University Press, 1997.
-
(1997)
Cambridge University Press
-
-
Gusfield, D.1
-
11
-
-
84944328392
-
A database index to large biological sequences
-
E. Hunt, M.P. Atkinson, and R.W. Irving. A Database Index to Large Biological Sequences. In VLDB J., 7(3):139-148, 2001.
-
(2001)
VLDB J.
, vol.7
, Issue.3
, pp. 139-148
-
-
Hunt, E.1
Atkinson, M.P.2
Irving, R.W.3
-
12
-
-
21144435627
-
The suffix binary search tree and suffix AVL tree
-
R.W. Irving and L. Love. The Suffix Binary Search Tree and Suffix AVL Tree. In Journal of Discrete Algorithms, 1 (2003) 387-408, 2003.
-
(2003)
Journal of Discrete Algorithms
, vol.1
, Issue.2003
, pp. 387-408
-
-
Irving, R.W.1
Love, L.2
-
14
-
-
0027681165
-
Suffix arrays: A new method for on-line string searches
-
U. Manber and G. Myers. Suffix arrays: a new method for on-line string searches. SIAM J. Comput., 22(5):935-948, 1993.
-
(1993)
SIAM J. Comput.
, vol.22
, Issue.5
, pp. 935-948
-
-
Manber, U.1
Myers, G.2
-
15
-
-
27144540187
-
OASIS: An online and accurate technique for local-alignment searches on biological sequences
-
C. Meek, J. M. Patel, and S. Kassety. OASIS: An Online and Accurate Technique for Local-alignment Searches on Biological Sequences. In Proc. of VLDB, 2003
-
(2003)
Proc. of VLDB
-
-
Meek, C.1
Patel, J.M.2
Kassety, S.3
-
16
-
-
0016942292
-
A space-economical suffix tree construction algorithm
-
E.M. McCreight. A Space-economical Suffix Tree Construction Algorithm. In Journal of the ACM, 23(2):262-272, 1976.
-
(1976)
Journal of the ACM
, vol.23
, Issue.2
, pp. 262-272
-
-
McCreight, E.M.1
-
17
-
-
38149018071
-
PATRICIA - Practical algorithm to retrieve information coded in alphanumeric
-
D. R. Morrison. PATRICIA - Practical Algorithm to Retrieve Information Coded in Alphanumeric. In Journal of the ACM, 15(4) pp514-534, 1968.
-
(1968)
Journal of the ACM
, vol.15
, Issue.4
, pp. 514-534
-
-
Morrison, D.R.1
-
19
-
-
0001704377
-
On-line construction of suffix-trees
-
E. Ukkonen. On-line construction of suffix-trees. In Algorithmica 14 (1995), 249-260, 1995.
-
(1995)
Algorithmica
, vol.14
, Issue.1995
, pp. 249-260
-
-
Ukkonen, E.1
-
21
-
-
33745784425
-
-
Last accessed: April 2005
-
http://www.ncbi.nlm.nih.gov - the NCBI web site. Last accessed: April 2005.
-
-
-
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