Differentiation of lymphocystis disease virus genotype by multiplex PCR

Journal of Microbiology

Volumn 44, Issue 2, 2006, Pages 248-253

  Kitamura, Shin Ichi ^a   Jung, Sung Ju ^a   Oh, Myung Joo ^a  

^a Chonnam National University   (South Korea)

Author keywords

Genotype; Lymphocystis disease virus (LCDV); Multiplex PCR

Indexed keywords

LYMPHOCYSTIS DISEASE VIRUS 1; MIRIDAE; PARALICHTHYS OLIVACEUS; PLEURONECTOIDEI; SERRANIDAE;

CAPSID PROTEIN; VIRUS DNA;

ARTICLE; CLASSIFICATION; GENETICS; GENOTYPE; IRIDOVIRUS; ISOLATION AND PURIFICATION; METHODOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYMERASE CHAIN REACTION; VALIDATION STUDY; VIRUS INFECTION;

BASE SEQUENCE; CAPSID PROTEINS; DNA VIRUS INFECTIONS; DNA, VIRAL; GENOTYPE; IRIDOVIRUS; MOLECULAR SEQUENCE DATA; PHYLOGENY; POLYMERASE CHAIN REACTION;

EID: 33745773326     PISSN: 12258873     EISSN: 12258873     Source Type: Journal    
DOI: None     Document Type: Article

References (17)

1. Chinchar, V.G., S. Essbauer, J.G. He, A. Hyatt, T. Miyazaki, V. Seligy, and T. Williams. 2005. Family Iridoviridae. In Virus Taxonomy. Eighth Report of the International Committee on Taxonomy of Viruses: pp. 145-162. Edited by C.M. Fauquet, M.A. Mayo, J. Maniloff, U. Desselberger, L.A. Ball. San Diego: Academic Press.
2. Darai, G., K. Anders, H.G. Koch, H. Delius, H. Gelderblom, C. Samalecos, and R.M. Flügel. 1983. Analysis of the genome of fish lymphocystis disease virus isolated directly from epidermal tumours of pleuronectes. Virology 126, 466-479.
3. García-Rosado, E., D. Castro, I. Cano, S.I. Pérez-Prieto, and J.J. Borrego. 2002. Serological techniques for detection of lymphocystis virus in fish. Aquat. Living Resour. 15, 179-185.
4. Iwamoto, R., O. Hasegawa, S. LaPatra, and M. Yoshimizu. 2002. Isolation and characterization of the Japanese flounder (Paralichthys olivaceus) lymphocystis disease virus. J. Aquat. Anim. Health 14, 114-123.
5. Kitamura, S.I., S.J. Jung, W.S. Kim, T. Nishizawa, M. Yoshimizu, and M.J. Oh. 2006. A new genotype of lymphocystivirus, LCDV-RF, from lymphocystis diseased rockfish. Arch. Virol. 151, 607-615.
6. Perez-Prieto S.I., S. Rodriguez-Saint-Jean, E. Garcia-Rosado, D. Castro, M.C. Alvarez, and J.J. Borrego. 1999. Virus susceptibility of the fish cell line SAF-1 derived from gilt-head seabream. Dis. Aquat. Org. 35, 149-153.
7. Perrière, G. and M. Gouy. 1996. WWW-Query: An on-line retrieval system for biological sequence banks. Biochimie. 78, 364-369.
8. Peters, N. and W. Schmidt. 1995. Formation and disintegration of virions in lymphocystis cells of plaice Pleuronectes platessa. Dis. Aquat. Org. 21, 109-113.
9. Schnitzler, P. and G. Darai. 1993. Identification of the gene encoding the major capsid protein of fish lymphocystis disease virus. J. Gen. Virol. 74, 2143-2150.
10. Schnitzler, P., H. Delius, J. Scholz, M. Touray, E. Orth, and G. Darai. 1987. Identification and nucleotide sequence analysis of the repetitive DNA element in the genome of fish lymphocystis disease virus. Virology 161, 570-578.
11. Thompson, J.D., T.J. Gibson, F. Plewniak, F. Jeanmougin and D.O. Higgins. 1997. The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25, 4876-4882.
12. Tidona, C.A. and G. Darai. 1997. The complete DNA sequence of lymphocystis disease virus. Virology 230, 207-216.
13. Tidona, C.A., P. Schnitzler, R. Kehm, and G. Darai. 1998. Is the major capsid protein of iridoviruses a suitable target for the study of viral evolution? Virus Genes 16, 59-66.
14. Walker, R. 1962. Fine structure of lymphocystis virus of fish. Virology 18, 503-505.
15. Wolf, K. 1988. Lymphocystis disease. In Fish Viruses and Fish Viral Diseases: pp. 268-291. Ithaca, Cornell University Press.
16. Zhang, Q.Y., F. Xiao, J. Xie, Z.Q. Li, and J.F. Gui. 2004. Complete genome sequence of lymphocystis disease virus isolated from China. J. Virol. 78, 6982-6994.
17. Zwillenberg, L.O. and K. Wolf. 1968. Ultrastructure of lymphocystis virus. J. Virol. 2, 393-399.