A new QTL for Ascochyta blight resistance in an RIL population derived from an interspecific cross in chickpea

Euphytica

Volumn 149, Issue 1-2, 2006, Pages 105-111

  Cobos, M J ^b   Rubio, J ^b   Strange, R N ^c   Moreno, M T ^b   Gil, J ^a   Millan, T ^a  

^a UNIVERSITY OF CÓRDOBA   (Spain)

^b IFAPA CENTRO ALAMEDA DEL OBISPO   (Spain)

^c UNIVERSITY COLLEGE LONDON   (United Kingdom)

Author keywords

Ascochyta rabiei; Chickpea; Cicer arietinum; Linkage map; QTL

Indexed keywords

ASCOCHYTA; CICER ARIETINUM; CICER RETICULATUM; FUSARIUM OXYSPORUM; MYCOSPHAERELLA RABIEI;

EID: 33745714430     PISSN: 00142336     EISSN: 15735060     Source Type: Journal    
DOI: 10.1007/s10681-005-9058-3     Document Type: Article

References (36)

1. Acikgoz, N., M. Karaca, C. Er & K. Meyveci, 1994. Chickpea and lentil production in Turkey. In: F.J. Muehlbauer & W.J. Kaiser, (Eds.), Expanding the production and use of cool season food legumes, pp. 388-398. Kluver Academic Publ., Dordrecht, The Netherland.
2. Campbell, C.L. & L.V. Madden, 1990. Temporal analysis of epidemics. I. Description and comparison of disease progress curves. In: Introduction to Plant Disease Epidemiology, pp. 161-202. Wiley, New York.
3. Cardy, B.J., C.W. Stuber & M.M. Goodman, 1980. Techniques for starch-gel electrophoresis of enzymes from maize (Zea mays L.) North Carolina State University. Department of statistics. Mimeo series. Raleigh.
4. Cho, S., W. Chen & F.J. Muehlbauer, 2004. Pathotype-specific genetic factors in chickpea (Cicer arietinum L.) for quantitative resistance to ascochyta blight. Theor Appl Genet 109: 733-739.
5. Churchill, G.A. & R.W. Doerge, 1994. Empirical threshold values for quantitative trait mapping. Genetics 138: 963-971.
6. Collard, B.C.Y., E.C.K. Pang, P.K. Ades & P.W.J. Taylor, 2003. Preliminary investigation of QTLs associated with seedling resistance to ascohyta blight from Cicer echinospermum, a wild relative of chickpea. Theor Appl Genet 107: 719-729.
7. Flandez-Galvez, H., R. Ford, E.C.K. Pang & P.W.J. Taylor, 2003. An intraspecific linkage map of the chickpea (Cicer arietinum L.) genome based on sequence tagged microsatellite site and resistance gene analog markers. Theor Appl Genet 106: 1447-1456.
8. Hüttel, B., P. Winter, K. Weising, W. Choumane, F. Weigand & G. Kahl, 1999. Sequence-tagged microsatellite-site markers for chickpea (Cicer arietinum L.). Genome 42: 210-217.
9. Jimenez-Diaz, R.M., P. Crino, M.H. Halila, C. Mosconi & A. Trapero-Casas, 1993. Screening for resistance to fusarium wilt and ascochyta blight in chickpea. In: K.B. Singh & M.C. Saxena (Eds.), Breeding for stress tolerance in cool-season food legumes, pp. 77-95. ICARDA, Jonh Wiley & Sons, Chichester, UK.
10. Johnson, H.W. & R.L. Bernard, 1962. Soybean genetic and breeding. Adv. Agrom. 14:149-221.
11. Kanazin, V., L.F. Marek & R.C. Shoemaker, 1996. Resistance gene analogs are conserved and clustered in soybean. Proc Natl Acad Sci USA 93: 11746-11750.
12. Kosambi, D.D. 1944. The estimation of map distance from recombination values. Ann Eugen 12: 172-175.
13. Kusmenoglu, I., F.J. Muehlbauer & K. Kazan, 1992. Inheritance of isozyme variation in ascochyta blight resistant chickpea lines. Crop Sci 32: 121-127.
14. Lander, E.S., P. Green, J. Abrahamson, A. Barlow, J. Daly, S.E. Lincoln & L. Newsburg, 1987. MAPMAKER: a interactive computer package for constructing primary genetic linkage maps of experimental populations. Genomics 1: 174-181.
15. Lander, E.S. & D. Botstein, 1989. Mapping Mendelian factors underlying quantitative traits using RFLP linkage maps. Genetics 121: 185-199.
16. Lassner, M.W., P. Peterson & J.I. Yoder, 1989. Simultaneous amplification of multiple DNA fragments by polymerase chain reaction in the analysis of transgenic plants and their progeny. Plant Mol Biol Rep 7: 116-128.
17. Millán, T., J. Rubio, M. Iruela, K. Daly, J.I. Cubero & J. Gil, 2003. Markers associated with Ascochyta blight resistance in chickpea an their potential in marker-assisted selection. Field Crops Research 84: 373-384.
18. Nene, Y.L. 1984. A review of Ascochyta blight of chickpea (Cicer arietinum L). In: M.C. Saxena & K.B. Singh (Eds.), Ascochyta blight and winter sowing of chickpea pp. 17-34. Martinus, Nijhoff., The Hague, The Netherlands.
19. Nene, Y.L. & M.V. Reddy, 1987. Chickpea diseases and their control. In: M.C. Saxena & K.B. Singh (Eds.), The Chickpea, pp 233-270. CAB Int., Oxon, UK.
20. Rakshit, S., P. Winter, M. Tekeoglu, J. Juarez Muñoz, T. Pfaff, A.M. Benko-Iseppon, F.J. Muehlbauer & G. Kahl, 2003. DAF marker tightly linked to a major locus for Ascochyta blight resistance in chickpea (Cicer arietinum L.). Euphytica 132: 23-30.
21. Ratnaparkhe, M.B., D.K. Santra, A. Tullu & F.J. Muehlbauer, 1998. Inheritance of inter-simple-sequence-repeat polymorphisms and linkage with a fusarium wilt resistance gene in chickpea. Theor Appl Genet 96: 348-353.
22. Santra, D.K., M. Tekeoglu, M. Ratnaparkhe, W.J. Kaiser & F.J. Muehlbauer, 2000. Identification and mapping of QTLs conferring resistance to ascochytablight in chickpea. Crop Sci 40: 1606-1612.
23. Sharma, K.D., P. Winter, G. Kahl & F.J. Muehlbauer, 2004. Molecular mapping of Fusarium oxysporum f. sp. ciceris race 3 resistance gene in chickpea. Theor Appl Genet 108: 1243-1248.
24. Simon, C.J. & F.J. Muehlbauer, 1997. Construction of a chickpea linkage map and its comparison with maps of pea and lentil. J Hered 88: 115-119.
25. Singh, K.B., G.C. Hawtin, Y.L. Nene & M.V. Reddy, 1981. Resistance in chickpeas to Ascochyta rabiei. Plant Dis 65: 586-587.
26. Singh, K.B. & M.V. Reddy, 1996. Improving chickpea yield by incorporating resistance to ascochyta blight. Theor Appl Genet 92: 509-515.
27. Tekeoglu, M., P.N. Rajesh & F.J. Muehlbauer, 2002. Integration of sequence tagged microsatellite sites to the chickpea genetic map. Theor Appl Genet 105: 847-854.
28. Torres, A.M., N.F. Weeden & A. Martin, 1993. Linkage among isozyme, RFLP and RAPD markers in Vicia faba. Theor Appl Genet 85: 935-945.
29. Udupa, S.M. & M. Baum, 2003. Genetic dissection of pathotype-specific resistance to ascochyta blight disease in chickpea (Cicer arietinum L.) using microsatellite markers. Theor Appl Genet 106: 1196-1202.
30. Van Ooijen, J.W. 1992. Accuracy of mapping quantitative trait loci in autogamous species. Theor Appl Genet 84: 803-811.
31. Wang, S., C.J. Basten & Z.B. Zeng, 2004. Windows QTL Cartographer 2.0. Department of Statistics, North Carolina State University. Raleigh N.C. (http://statgen.ncsu.edu/qtlcart/WQTLCart.htm).
32. Welsh, J. & M. McClellan, 1990. Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Res 18: 7213-7218.
33. Williams, S.J., A.R. Kubelik, K.J. Livak, A. Rafalski & S.V. Tingey, 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res 18: 6531-6535.
34. Winter, P., A.M. Benko-Iseppon, B. Hüttel, M. Ratnaparkhe, A. Tullu, G. Sonnante, T. Pfaff, M. Tekeoglu, D. Santra, V.J. Sant, P.N. Rajesh, G. Kahl & F.J. Muehlbauer, 2000. A linkage map of the chickpea (Cicer arietinum L.) genome based on recombinant inbred lines from a C. arietinum x C. reticulatum cross: localization of resistance gene for fusarium wilt races 4 and 5. Theor Appl Genet 101: 1155-1163.
35. Winter, P., T. Pfaff, S.M. Udupa, B. Hüttel, P.C. Sharma, S. Sahi, R. Arreguin-Espinoza, F. Weigand, F.J. Muehlbauer & G. Kahl, 1999. Characterization and mapping of sequence-tagged microsatellite sites in the chickpea (Cicer arietinum L.) genome. Mol Gen Genet 262: 90-101.
36. Yu, Y.G., G.R. Buss, & M.A. Saghai Maroof, 1996. Isolation of a superfamily of candidate resistance genes in soybean based on a conserved nucleotide binding site. Proc Natl Acad Sci USA 93: 11751-11756.