Proton transfer in gramicidin water wires in phospholipid bilayers: Attenuation by phosphoethanolamine

Biophysical Journal

Volumn 91, Issue 2, 2006, Pages 580-587

  Chernyshev, Anatoly ^a,b   Cukierman, Samuel ^a  

^a LOYOLA UNIVERSITY CHICAGO   (United States)

^b E11 SSH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GRAMICIDIN; GRAMICIDIN A; MONOACYLGLYCEROL; PEPTIDE; PHOSPHOETHANOLAMINE; PHOSPHOLIPID;

ARTICLE; ATTENUATION; DIASTEREOISOMER; ELECTRIC POTENTIAL; HYDROGEN BOND; ISOTHERM; KINETICS; MEMBRANE; PHOSPHOLIPID BILAYER; PHOSPHOLIPID MEMBRANE; PROTON TRANSPORT; QUANTITATIVE ANALYSIS;

EID: 33745714399     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1529/biophysj.106.083352     Document Type: Article

References (51)

1. Arseniev, A. S., I. L. Barsukov, V. F. Bystrov, A. L. Lonize, and Y. A. Ovchinikov. 1985. Proton NMR study of gramicidin A transmembrane ion channel. Head-to-head right handed, single stranded helices. FEBS Lett. 186:168-174.
2. Ketchem, R. R., W. Hu, and T. A. Cross. 1993. High resolution of gramicidin A in a lipid bilayer by solid-state NMR. Science. 261:1457-1460.
3. Ketchem, R. R., B. Roux, and T. A. Cross. 1997. High-resolution polypeptide structure in a lamellar phase lipid environment from solid state NMR derived constraints. Structure. 5:1655-1669.
4. (L,D) helix. Proc. Natl. Acad. Sci. USA. 68:672-676.
5. Hladky, S. B., and D. A. Haydon. 1972. Ion transfer across lipid membranes in the presence of gramicidin A. I. Studies of the unit conductance channel. Biochim. Biophys. Acta. 274:294-312.
6. Finkelstein, A. 1987. Water Movement through Lipid Bilayers, Pores, and Plasma Membrane. Theory and Reality. John Willey, New York.
7. Levitt D.G. 1984. Kinetics of movement in narrow channels. Curr. Topics Membr. and Transp. 21:181-197.
8. Tripathi, S., and S. B. Hladky. 1998. Streaming potentials in gramicidin channels measured with ion selective electrodes. Biophys. J. 74:2912-2917.
9. 1ATPases? Biophys. J. 60:101-109.
10. Chernyshev, A., K. M. Armstrong, and S. Cukierman. 2003. Proton transfer in gramicidin channels is modulated by the thickness of monoglyceride bilayers. Biophys. J. 84:238-250.
11. Chernyshev, A., R. Pomès, and S. Cukierman. 2003. Kinetic isotope effects of proton transfer in aqueous and methanol containing solutions, and in gramicidin channels. Biophys. Chem. 103:179-190.
12. Chernyshev, A., and S. Cukierman. 2002. Thermodynamic view of activation energies of proton transfer in various gramicidin A channels. Biophys. J. 82:182-192.
13. Eisenman, G., B. Enos, J. Hägglund, and J. Sandblom. 1980. Gramicidin A as an example of a single filing ionic channel. Ann. N. Y. Acad. Sci. 329:8-20.
14. Myers, V. B., and D. A. Haydon. 1972. Ion transfer across lipid membranes in the presence of gramicidin A. Biochim. Biophys. Acta. 274:313-322.
15. + translocation along the single-file water chain in the gramicidin A channel. Biophys. J. 71:19-39.
16. Quigley, E. P., P. Quigley, D. S. Crumrine, and S. Cukierman. 1999. The conduction of protons in different stereoisomers of dioxolane-linked gramicidin A channels. Biophys. J. 77:2479-2491.
17. Voth, G. A. 2003. The computer simulation of proton transport in biomolecular systems. Front. Biosci. 8:1384-79.
18. Cukierman, S. 2003. The transfer of protons in water wires inside proteins. Front. Biosci. 8:1118-1139.
19. DeCoursey, T. E. 2003. Voltage-gated proton channels and other proton transfer pathways. Physiol. Rev. 83:475-579.
20. Nagle, J. F., and S. Tristam-Nagle. 1983. Hydrogen bonded chain mechanisms for proton conduction and proton pumping. J. Membr. Biol. 74:1-14.
21. Nagle, J. F., and H. J. Morowitz. 1978. Molecular mechanisms for proton transport in membranes. Proc. Natl. Acad. Sci. USA. 75:298-302.
22. Armstrong, K. M., E. P. Quigley, P. Quigley, D. S. Crumrine, and S. Cukierman. 2001. Covalently linked gramicidin channels: effects of linker hydrophobicity and alkaline metals on different stereoisomers. Biophys. J. 80:1810-1818.
23. Cukierman, S., E. P. Quigley, and D. S. Crumrine. 1997. Proton conduction in gramicidin A and in its dioxolane-linked dimer in different lipid bilayers. Biophys. J. 73:2489-2502.
24. Quigley, E. P., A. Emerick, D. S. Crumrine, and S. Cukierman. 1998. Proton current attenuation by methanol in a dioxolane-linked gramicidin A dimer in different lipid bilayers. Biophys. J. 5:2811-2820.
25. Stankovic, C. J., S. H. Heinemann, J. M. Delfino, F. J. Sigworth, and S. L. Schreiber. 1989. Transmembrane channels based on tartaric acid-gramicidin A hybrids. Science. 244:813-817.
26. Yu, C. H., S. Cukierman, and R. Pomès. 2003. Theoretical study of the structure and dynamic fluctuations of dioxolane-linked gramicidin channels. Biophys. J. 84:816-831.
27. Godoy, C. M. G., and S. Cukierman. 2001. Modulation of proton transfer in the water wire of dioxolane-linked gramicidin channels by lipid membranes. Biophys. J. 81:1430-1438.
28. Marsh, D. 1990. CRC Handbook of Lipid Bilayers. CRC Press, Boca Raton, FL. 81-85
29. Cukierman, S. 2000. Proton mobilities in water and in different stereoisomers of covalently linked gramicidin A channels. Biophys. J. 78:1825-1834.
30. McLaughlin, S. 1977. Electrostatic potentials at membrane solution interfaces. Curr. Top. Membr. Trans. 9:71-144.
31. Reference deleted in proof.
32. Eyring, H., R. Lumry, and J. W. Woodbury. 1949. Some applications of modern rate theory to physiological systems. Rec. Chem. Prog. 10:100-114.
33. Zwolinski, B. J., H. Eyring, and C. E. Reese. 1949. Diffusion and membrane permeability. J. Phys. Chem. 53:1426-1453.
34. Hille, B., and W. Schwarz. 1978. Potassium channels as multi-ion single-file pores. J. Gen. Physiol. 72:409-442.
35. Cole, C. D., A. S. Frost, N. Thompson, M. Cotton, T. A. Cross, and D. D. Busath. 2002. Noncontact dipole effects on channel permeation. VI. 5F- and 6F-Trp gramicidin channel currents. Biophys. J. 83:1974-1986.
36. + currents. Biochim. Biophys. Acta. 987:8-14.
37. Gowen, J. A., J. C. Markham, S. E. Morrison, T. A. Cross, D. D. Busath, E. J. Mapes, and M. F. Schumaker. 2002. The role of Trp side chains in tuning single proton conduction through gramicidin channels. Biophys. J. 83:880-898.
38. 23Na-NMR. Biochim. Biophys. Acta. 1238:1-11.
39. Olah, G. A., H. W. Huang, W. Liu, and Y. Wu. 1991. Location of ion-binding sites in the gramicidin channel by X-ray diffraction. J. Mol. Biol. 218:847-858.
40. Tian, F., K. C. Lee, W. Hu, and T. A. Cross. 1996. Monovalent cation transport: lack of structural information upon cation binding. Biochemistry. 35:11959-11966.
41. Sagnella, D. E., and G. A. Voth. 1996. Structure and dynamics of hydronium in the ion channel gramicidin A. Biophys. J. 70:2043-2051.
42. Jordan, P. C. 1999. Ion permeation and channel kinetics. J. Gen. Physiol. 114:601-603.
43. Roux, B. 1999. Theories of ion permeation: a chaser. J. Gen. Physiol. 114:605-608.
44. 13 gramicidin A channels. Biophys. J. 75:2830-2844.
45. Phillips, L. R., C. D. Cole, R. J. Hendershoot, M. Cotten, T. A. Cross, and D. D. Busath. 1999. Noncontact dipole effects on channel permeation. III. Anomalous proton conductance effects in gramicidin. Biophys. J. 77:2492-2501.
46. Cukierman S. 1999. Flying protons in linked gramicidin A channels. Israel Journal of Chemistry. 39:419-426.
47. Lundbæk, J. A., and O. S. Andersen. 1994. Lysophospholipids modulate channel function by altering the mechanical properties of lipid bilayers. J. Gen. Physiol. 104:645-673.
48. Armstrong, K. M., and S. Cukierman. 2002. On the origin of closing flickers in gramicidin channels: a new hypothesis. Biophys. J. 82:1329-1337.
49. Jeffrey, G. A. 1997. An Introduction to Hydrogen Bonding. Oxford University Press, New York.
50. Damodaran, K. V., and K. M. Merz Jr. 1994. A comparison of DMPC-and DLPE-based lipid bilayers. Biophys. J. 66:1076-1087.
51. Qin, Z., and G. A. Voth. 2006. The effect of membrane environment on proton permeation through gramicidin A channels. Biophys. J. 90:405a.