-
1
-
-
0025183708
-
Basic local alignment search tool
-
S.F. Altschul, W. Gish, W. Miller, E.W. Myers, and D.J. Lipman. Basic local alignment search tool. Journal of Molecular Biology.215. 403-410. 1990.
-
(1990)
Journal of Molecular Biology
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
0035161543
-
Genomes Online Database (GOLD): A Monitor pf genome projects world-wide
-
A. Bernai, U. Ear, and N. Kyrpides, Genomes Online Database (GOLD): A Monitor pf genome projects world-wide. Nucleic Acid Research 29, 126-127, 2001. See also: http://www.genomesonline.org/.
-
(2001)
Nucleic Acid Research
, vol.29
, pp. 126-127
-
-
Bernai, A.1
Ear, U.2
Kyrpides, N.3
-
4
-
-
4644231028
-
Prolinks: A database of protein functional linkages derived from coevolution
-
P.M. Bowers, M. Pellegrini, M.J. Thompson, J. Fierro, T.O. Yeates, and D. Eisenberg, Prolinks: A Database of Protein Functional Linkages Derived from Coevolution, Genome Biology 5, 2004.
-
(2004)
Genome Biology
, vol.5
-
-
Bowers, P.M.1
Pellegrini, M.2
Thompson, M.J.3
Fierro, J.4
Yeates, T.O.5
Eisenberg, D.6
-
6
-
-
0034957542
-
K2/Kleisli and GUS: Experiments in integrated access to genomic data sources
-
S.B. Davidson, J. Crabtree, B. Bunk, J. Schug, V. Tannen, and C. Stoeckert, K2/Kleisli and GUS: Experiments in Integrated Access to Genomic Data Sources, IBM Systems Journal, 40, 512-531, 2001.
-
(2001)
IBM Systems Journal
, vol.40
, pp. 512-531
-
-
Davidson, S.B.1
Crabtree, J.2
Bunk, B.3
Schug, J.4
Tannen, V.5
Stoeckert, C.6
-
7
-
-
0003545930
-
-
See data definitions at: http://gdbwww.gdb.org/gdb/schema.html.
-
GDB Human Genome Database. http://www.gdb.org/. See data definitions at: http://gdbwww.gdb.org/gdb/schema.html.
-
GDB Human Genome Database
-
-
-
8
-
-
13444259868
-
The molecular biology collection: 2005 update
-
Database Issue, D5-dD24
-
M.Y. Galperin, The Molecular Biology Collection: 2005 Update, Nucleic Acids Research, 33, Database Issue, D5-dD24, 2005.
-
(2005)
Nucleic Acids Research
, vol.33
-
-
Galperin, M.Y.1
-
9
-
-
0346801873
-
The gene ontology database and informatics resource
-
Gene Ontology Consortium, The Gene Ontology Database and Informatics Resource, Nucleic Acids Research, 32, 258-261, 2004. See also http://www.geneontology.org/.
-
(2004)
Nucleic Acids Research
, vol.32
, pp. 258-261
-
-
-
10
-
-
7944220732
-
Analysis and annotation of microbial genome sequences
-
Kluwer Academic/Plenum Publishers
-
L. Hauser, F. Larimer, M. Land, M. Shah, and E. Uberbacher, Analysis and Annotation of Microbial Genome Sequences, Genetic Engineering, Vol. 26, Kluwer Academic/Plenum Publishers, 225-238, 2004.
-
(2004)
Genetic Engineering
, vol.26
, pp. 225-238
-
-
Hauser, L.1
Larimer, F.2
Land, M.3
Shah, M.4
Uberbacher, E.5
-
11
-
-
33745604565
-
-
Integrated Microbial Genomes (IMG) System, http://img.jgi.doe.gov/.
-
-
-
-
12
-
-
33745623023
-
Database management for life science research: Summary report of the workshop on data management for molecular an cell biology
-
H.V. Jagadish and F. Olken, Database Management for Life Science Research: Summary Report of the Workshop on Data Management for Molecular an Cell Biology, OMICS, Vol. 7, No. 1, 2003.
-
(2003)
OMICS
, vol.7
, Issue.1
-
-
Jagadish, H.V.1
Olken, F.2
-
14
-
-
13444304365
-
Integr8 and genome reviews: Integrated views of complete genomes and proteoms
-
P. Kersey, et al. Integr8 and Genome Reviews: Integrated Views of Complete Genomes and Proteoms, Nucleic Acid Research 33, D297-D302, 2005. See http://www.ebi.ac.uk/GenomeReviews/
-
(2005)
Nucleic Acid Research
, vol.33
-
-
Kersey, P.1
-
15
-
-
0037944233
-
Pathways database system: An integrated system for biological pathways
-
L. Krishnamurty, J. Nadeau, G. Ozsoyoglou, M. Ozsoyoglou, G. Schaeffer, M. Tasan, and W. Xu, Pathways Database System: An Integrated System for Biological Pathways, Bioinofrmatics, 19, 930-937, 2003.
-
(2003)
Bioinofrmatics
, vol.19
, pp. 930-937
-
-
Krishnamurty, L.1
Nadeau, J.2
Ozsoyoglou, G.3
Ozsoyoglou, M.4
Schaeffer, G.5
Tasan, M.6
Xu, W.7
-
16
-
-
0012306021
-
Apollo: A sequence annotation editor
-
S. E. Lewis et al, Apollo: A Sequence Annotation Editor. Genome Biology, 3 (12), 2002. http://genomebiology.com/2002/3/12/.
-
(2002)
Genome Biology
, vol.3
, Issue.12
-
-
Lewis, S.E.1
-
17
-
-
33745611937
-
Integration challenges in gene expression data management
-
Morgan Kauffman Publishers (Elsevier Science)
-
V.M. Markowitz, J. Campbell, I.A. Chen, A. Kosky, K. Palaniappan, and T. Topaloglou, Integration Challenges in Gene Expression Data Management. Bioinformatics: Managing Scientific Data, Morgan Kauffman Publishers (Elsevier Science), 277-301, 2003.
-
(2003)
Bioinformatics: Managing Scientific Data
, pp. 277-301
-
-
Markowitz, V.M.1
Campbell, J.2
Chen, I.A.3
Kosky, A.4
Palaniappan, K.5
Topaloglou, T.6
-
18
-
-
0002815764
-
Object-protocol model data management tools '97
-
Stan Letovsky (ed), Kluwer Academic Publishers
-
V.M. Markowitz, I.A. Chen, A.S. Kosky, and E. Szeto, Object-Protocol Model Data Management Tools '97. Bioinformatics, Databases and Systems, Stan Letovsky (ed), Kluwer Academic Publishers, pp. 187-199, 1999.
-
(1999)
Bioinformatics, Databases and Systems
, pp. 187-199
-
-
Markowitz, V.M.1
Chen, I.A.2
Kosky, A.S.3
Szeto, E.4
-
20
-
-
0037208159
-
The ERGO genome analysis and discovery system
-
R. Overbeek, R., et al. The ERGO Genome Analysis and Discovery System. Nucleic Acid Research 31, 164-171, 2003. See also http://www.ergo-light.com/ ERGO/
-
(2003)
Nucleic Acid Research
, vol.31
, pp. 164-171
-
-
Overbeek, R.1
-
21
-
-
0037398732
-
Missing genes in metabolic pathways: A comparative genomic approach
-
A. Osterman and R. Overbeek, Missing Genes in Metabolic Pathways: A Comparative Genomic Approach, Chemical Biology, 7, 238-251, 2003.
-
(2003)
Chemical Biology
, vol.7
, pp. 238-251
-
-
Osterman, A.1
Overbeek, R.2
-
22
-
-
0035822043
-
Biology's name game
-
H. Pearson, Biology's name game, Nature, 417, 631-632, 2001
-
(2001)
Nature
, vol.417
, pp. 631-632
-
-
Pearson, H.1
-
23
-
-
0035166979
-
The comprehensive microbial resource
-
J.D. Peterson, L.A. Umayam, T. Dickinson, E.K. Hickey, and O. White, The Comprehensive Microbial Resource, Nucleic Acid Research 29, 123-125, 2001. See http://www.tigr.org/tigr-scripts/CMR2/CMRHomePage.spl
-
(2001)
Nucleic Acid Research
, vol.29
, pp. 123-125
-
-
Peterson, J.D.1
Umayam, L.A.2
Dickinson, T.3
Hickey, E.K.4
White, O.5
-
24
-
-
13444306641
-
NCBI Reference sequence (RefSeq): A curated nonredundant sequence database of genomes, transcripts, and proteins
-
K.D. Pruitt, T. Tatusova, and D.R. Maglott, NCBI Reference Sequence (RefSeq): A Curated Nonredundant Sequence Database of Genomes, Transcripts, and Proteins, Nucleic Acid Research 33, D501-D504, 2005. See http://www.ncbi.nhn. nih.gov/RefSeq/.
-
(2005)
Nucleic Acid Research
, vol.33
-
-
Pruitt, K.D.1
Tatusova, T.2
Maglott, D.R.3
-
25
-
-
84871647777
-
-
NCBI Taxonomy, http://www.ncbi.nlm.nih.gov/Taxonomy/taxonomyhome.html/.
-
NCBI Taxonomy
-
-
-
27
-
-
33745619129
-
An experimental approach to genome annotation
-
R.J. Roberts, P. Karp, S. Kasif, S. Linn, and M.R. Buckley, An Experimental Approach to Genome Annotation, American Academy for Microbiology, 2005, http://www.asm.org/Academy/index.asp?bid=32664.
-
(2005)
American Academy for Microbiology
-
-
Roberts, R.J.1
Karp, P.2
Kasif, S.3
Linn, S.4
Buckley, M.R.5
-
29
-
-
0037249403
-
MBGD: Microbial genome database for comparative analysis
-
I. Uchiyama, I. MBGD: Microbial Genome Database for Comparative Analysis, Nucleic Acid Research 31, 58-62, 2003.
-
(2003)
Nucleic Acid Research
, vol.31
, pp. 58-62
-
-
Uchiyama, I.1
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