Optimization of codon usage of poxvirus genes allows for improved transient expression in mammalian cells

Virus Genes

Volumn 33, Issue 1, 2006, Pages 15-26

  Barrett, John W ^b,c   Sun, Yunming ^b,c   Nazarian, Steven H ^b,c   Belsito, Tara A ^b,c   Brunetti, Craig R ^a   McFadden, Grant ^c  

^a TRENT UNIVERSITY   (Canada)

^b ROBARTS RESEARCH INSTITUTE   (Canada)

^c UNIVERSITY OF WESTERN ONTARIO   (Canada)

Author keywords

Codon optimization; Codon usage; Effective codon number; Poxvirus expression; Yatapoxvirus

Indexed keywords

MESSENGER RNA; RNA POLYMERASE II;

ARTICLE; CAPRIPOXVIRUS; CHORDOPOXVIRINAE; CODON; CONTROLLED STUDY; ENTOMOPOXVIRUS; FOWLPOX VIRUS; GENE CASSETTE; GENE EXPRESSION; GENE SEQUENCE; GENETIC TRANSFECTION; HUMAN; HUMAN CELL; LEPORIPOXVIRUS; MAMMAL CELL; MOLLUSCIPOXVIRUS; NONHUMAN; NUCLEOTIDE SEQUENCE; ORTHOPOXVIRUS; PARAPOXVIRUS; POXVIRUS; PRIMATE; PRIORITY JOURNAL; PROTEIN EXPRESSION; RNA STABILITY; VIRUS GENE;

ANIMALS; BASE SEQUENCE; CELL LINE; CERCOPITHECUS AETHIOPS; CODON; COS CELLS; DNA, VIRAL; GENE EXPRESSION REGULATION, VIRAL; HUMANS; MOLECULAR SEQUENCE DATA; POXVIRIDAE; TRANSFECTION;

MAMMALIA; POXVIRIDAE; PRIMATES; YATAPOXVIRUS;

EID: 33745480191     PISSN: 09208569     EISSN: 1572994X     Source Type: Journal    
DOI: 10.1007/s11262-005-0035-7     Document Type: Article

References (17)

1. B.T. Seet J.B. Johnston C.R. Brunetti J.W. Barrett H. Everett C. Cameron J. Sypula S.H. Nazarian A. Lucas G. [tmp] McFadden 2003 Annu. Rev. Immunol. 21 377 423
2. G.L. Disbrow I. Sunitha C.C. Baker J. Hanover R. Schlegel 2003 Virology 311 1 105 114
3. N. Mossadegh L. Gissmann M. Muller H. Zentgraf A. Alonso P. Tomakidi 2004 Virology 326 1 57 66
4. K.L. Nguyen M. Ilano H. Akari E. Miyagi E.M. Poeschla K. Strebel S. Bour 2004 Virology 319 2 163 175
5. C.R. Brunetti M. Paulose-Murphy R. Singh J. Qin J.W. Barrett A. Tardivel P. Schneider K. Essani G. [tmp] McFadden 2003 Proc. Natl. Acad. Sci. USA 100 8 4831 4836
6. D.R. O'Reilly L.K. Miller V.A. Lucknow 1992 Baculovirus Expression Vectors: A Laboratory Manual W.H. Freeman and Company New York, NY
7. J.F. Peden, Analysis of codon usage, University of Nottingham (2000)
8. S. Mediratta K. Essani 1999 Can. J. Microbiol. 45 1 92 96
9. F. Wright 1990 Gene 87 1 23 29
10. J.J. Esposito, F. Fenner, in Fields Virology, vol. 2, 4th edn. eds. by D.M. Knipe, P.M. Howley (Lippincott Williams & Wilkins, Philadelphia 2001), pp. 2885-2921
11. G. [tmp] McFadden 2005 Nat. Rev. Immunol. 3 201 213
12. D.B. Levin B. Whittome 2000 J. Gen. Virol. 81 Pt 9 2313 2325
13. B. Moss, in Fields Virology, vol. 2, 4th edn. eds. by D.M. Knipe, P.M. Howley (Lippincott Williams & Wilkins, Philadelphia 2001) pp. 2849-2883
14. J.R. Powell E.N. Moriyama 1997 Proc. Natl. Acad. Sci. USA 94 15 7784 7790
15. P.D. Gershon D.N. Black 1989 J. Gen. Virol. 70 Pt 3 525 533
16. R. Wittek C.C. Kuenzle R. Wyler 1979 J. Gen. Virol. 43 1 231 234
17. W Gu T. Zhou J. Ma X. Sun Z. Lu 2004 Virus Res. 101 2 155 161