-
1
-
-
0013991362
-
Bacterial carotenoids: The structures of flexixanthin and deoxy-flexixanthin
-
Aasen AJ, Jensen SL (1966) Bacterial carotenoids: the structures of flexixanthin and deoxy-flexixanthin. Acta Chem Scand 20:1970-1988
-
(1966)
Acta Chem Scand
, vol.20
, pp. 1970-1988
-
-
Aasen, A.J.1
Jensen, S.L.2
-
2
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403-410
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
3
-
-
0035852784
-
A single gene for lycopene cyclase, phytoene synthase, and regulation of carotene biosynthesis in Phycomyces
-
USA
-
Arrach N, Fernandez-Martin R, Cerda-Olmedo E, Avalos J (2001) A single gene for lycopene cyclase, phytoene synthase, and regulation of carotene biosynthesis in Phycomyces. Proc Natl Acad Sci USA 98:1687-1692
-
(2001)
Proc Natl Acad Sci
, vol.98
, pp. 1687-1692
-
-
Arrach, N.1
Fernandez-Martin, R.2
Cerda-Olmedo, E.3
Avalos, J.4
-
4
-
-
0035717894
-
Mutants of the carotene cyclase domain of al-2 from Neurospora crassa
-
Arrach N, Schmidhauser TJ, Avalos J (2002) Mutants of the carotene cyclase domain of al-2 from Neurospora crassa. Mol Genet Genomics 266:914-921
-
(2002)
Mol Genet Genomics
, vol.266
, pp. 914-921
-
-
Arrach, N.1
Schmidhauser, T.J.2
Avalos, J.3
-
5
-
-
2342556394
-
-
Britton G, Liaaen-Jensen S, Pfander H (eds). Birkhauser Verlag, Basel
-
Britton G, Liaaen-Jensen S, Pfander H (eds) (2004) Carotenoids handbook. Birkhauser Verlag, Basel
-
(2004)
Carotenoids Handbook
-
-
-
6
-
-
13444304367
-
The ribosomal database project (RDP-II): Sequences and tools for high-throughput rRNA analysis
-
Cole JR et al (2005) The ribosomal database project (RDP-II): sequences and tools for high-throughput rRNA analysis. Nucleic Acids Res 1:D294-D296
-
(2005)
Nucleic Acids Res
, vol.1
-
-
Cole, J.R.1
-
7
-
-
0033813444
-
Evidence of a role for LytB in the nonmevalonate pathway of isoprenoid biosynthesis
-
Cunningham FX Jr, Lafond TP, Gantt E (2000) Evidence of a role for LytB in the nonmevalonate pathway of isoprenoid biosynthesis. J Bacteriol 182:5841-5848
-
(2000)
J Bacteriol
, vol.182
, pp. 5841-5848
-
-
Cunningham Jr., F.X.1
Lafond, T.P.2
Gantt, E.3
-
8
-
-
10344250388
-
Functional analysis of the beta and epsilon lycopene cyclase enzymes of Arabidopsis reveals a mechanism for control of cyclic carotenoid formation
-
Cunningham FX Jr, Pogson B, Sun Z, McDonald KA, DellaPenna D, Gantt E (1996) Functional analysis of the beta and epsilon lycopene cyclase enzymes of Arabidopsis reveals a mechanism for control of cyclic carotenoid formation. Plant Cell 8:1613-1626
-
(1996)
Plant Cell
, vol.8
, pp. 1613-1626
-
-
Cunningham Jr., F.X.1
Pogson, B.2
Sun, Z.3
McDonald, K.A.4
DellaPenna, D.5
Gantt, E.6
-
9
-
-
0028485650
-
Molecular structure and enzymatic function of lycopene cyclase from the cyanobacterium Synechococcus sp strain PCC7942
-
Cunningham FX Jr, Sun Z, Chamovitz D, Hirschberg J, Gantt E (1994) Molecular structure and enzymatic function of lycopene cyclase from the cyanobacterium Synechococcus sp strain PCC7942. Plant Cell 6:1107-1121
-
(1994)
Plant Cell
, vol.6
, pp. 1107-1121
-
-
Cunningham Jr., F.X.1
Sun, Z.2
Chamovitz, D.3
Hirschberg, J.4
Gantt, E.5
-
10
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
11
-
-
2942682647
-
Genome sequence of Picrophilus torridus and its implications for life around pH 0
-
USA
-
Futterer O et al (2004) Genome sequence of Picrophilus torridus and its implications for life around pH 0. Proc Natl Acad Sci USA 101:9091-9096
-
(2004)
Proc Natl Acad Sci
, vol.101
, pp. 9091-9096
-
-
Futterer, O.1
-
12
-
-
0000685441
-
Taxonomic outline of the archaea and bacteria
-
Boone DR, Castenholz RW (eds). Springer, Berlin Heidelberg New York
-
Garrity GM, Holt JG (2001) Taxonomic outline of the archaea and bacteria. In: Boone DR, Castenholz RW (eds) Bergey's manual of systematic bacteriology. Springer, Berlin Heidelberg New York, pp 155-166
-
(2001)
Bergey's Manual of Systematic Bacteriology
, pp. 155-166
-
-
Garrity, G.M.1
Holt, J.G.2
-
13
-
-
2442466048
-
Two distinct crt gene clusters for two different functional classes of carotenoid in Bradyrhizobium
-
Giraud E et al (2004) Two distinct crt gene clusters for two different functional classes of carotenoid in Bradyrhizobium. J Biol Chem 279:15076-15083
-
(2004)
J Biol Chem
, vol.279
, pp. 15076-15083
-
-
Giraud, E.1
-
14
-
-
0032811818
-
Escherichia coli open reading frame 696 is idi, a nonessential gene encoding isopentenyl diphosphate isomerase
-
Hahn FM, Hurlburt AP, Poulter CD (1999) Escherichia coli open reading frame 696 is idi, a nonessential gene encoding isopentenyl diphosphate isomerase. J Bacteriol 181:4499-4504
-
(1999)
J Bacteriol
, vol.181
, pp. 4499-4504
-
-
Hahn, F.M.1
Hurlburt, A.P.2
Poulter, C.D.3
-
15
-
-
0034043253
-
Isolation and characterization of canthaxanthin biosynthesis genes from the photosynthetic bacterium Bradyrhizobium sp. strain ORS278
-
Hannibal L et al (2000) Isolation and characterization of canthaxanthin biosynthesis genes from the photosynthetic bacterium Bradyrhizobium sp. strain ORS278. J Bacteriol 182:3850-3853
-
(2000)
J Bacteriol
, vol.182
, pp. 3850-3853
-
-
Hannibal, L.1
-
16
-
-
0037564354
-
Fusion-type lycopene beta-cyclase from a thermoacidophilic archaeon Sulfolobus solfataricus
-
Hemmi H, Ikejiri S, Nakayama T, Nishino T (2003) Fusion-type lycopene beta-cyclase from a thermoacidophilic archaeon Sulfolobus solfataricus. Biochem Biophys Res Commun 305:586-591
-
(2003)
Biochem Biophys Res Commun
, vol.305
, pp. 586-591
-
-
Hemmi, H.1
Ikejiri, S.2
Nakayama, T.3
Nishino, T.4
-
17
-
-
0029360424
-
Metabolism of cyclic carotenoids: A model for the alteration of this biosynthetic pathway in Capsicum annuum chromoplasts
-
Hugueney P et al (1995) Metabolism of cyclic carotenoids: a model for the alteration of this biosynthetic pathway in Capsicum annuum chromoplasts. Plant J 8:417-424
-
(1995)
Plant J
, vol.8
, pp. 417-424
-
-
Hugueney, P.1
-
18
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111-120
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
19
-
-
0033804789
-
A carotenogenic gene cluster from Brevibacterium linens with novel lycopene cyclase genes involved in the synthesis of aromatic carotenoids
-
Krubasik P, Sandmann G (2000a) A carotenogenic gene cluster from Brevibacterium linens with novel lycopene cyclase genes involved in the synthesis of aromatic carotenoids. Mol Gen Genet 263:423-432
-
(2000)
Mol Gen Genet
, vol.263
, pp. 423-432
-
-
Krubasik, P.1
Sandmann, G.2
-
20
-
-
0034471456
-
Molecular evolution of lycopene cyclases involved in the formation of carotenoids with ionone end groups
-
Krubasik P, Sandmann G (2000b) Molecular evolution of lycopene cyclases involved in the formation of carotenoids with ionone end groups. Biochem Soc Trans 28:806-810
-
(2000)
Biochem Soc Trans
, vol.28
, pp. 806-810
-
-
Krubasik, P.1
Sandmann, G.2
-
21
-
-
0345517285
-
Functional analysis of genes from Streptomyces griseus involved in the synthesis of isorenieratene, a carotenoid with aromatic end groups, revealed a novel type of carotenoid desaturase
-
Krugel H, Krubasik P, Weber K, Saluz HP, Sandmann G (1999) Functional analysis of genes from Streptomyces griseus involved in the synthesis of isorenieratene, a carotenoid with aromatic end groups, revealed a novel type of carotenoid desaturase. Biochim Biophys Acta 1439:57-64
-
(1999)
Biochim Biophys Acta
, vol.1439
, pp. 57-64
-
-
Krugel, H.1
Krubasik, P.2
Weber, K.3
Saluz, H.P.4
Sandmann, G.5
-
22
-
-
3242810318
-
MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
-
Kumar S, Tamura K, Nei M (2004) MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5:150-163
-
(2004)
Brief Bioinform
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
23
-
-
0037227020
-
Isolation and phylogenetic characterization of bacteria capable of inducing differentiation in the green alga Monostroma oxyspermum
-
Matsuo Y, Suzuki M, Kasai H, Shizuri Y, Harayama S (2003) Isolation and phylogenetic characterization of bacteria capable of inducing differentiation in the green alga Monostroma oxyspermum. Environ Microbiol 5:25-35
-
(2003)
Environ Microbiol
, vol.5
, pp. 25-35
-
-
Matsuo, Y.1
Suzuki, M.2
Kasai, H.3
Shizuri, Y.4
Harayama, S.5
-
24
-
-
0035209305
-
The lytB gene of Escherichia coli is essential and specifies a product needed for isoprenoid biosynthesis
-
McAteer S, Coulson A, McLennan N, Masters M (2001) The lytB gene of Escherichia coli is essential and specifies a product needed for isoprenoid biosynthesis. J Bacteriol 183:7403-7407
-
(2001)
J Bacteriol
, vol.183
, pp. 7403-7407
-
-
McAteer, S.1
Coulson, A.2
McLennan, N.3
Masters, M.4
-
25
-
-
0028817748
-
Structure and functional analysis of a marine bacterial carotenoid biosynthesis gene cluster and astaxanthin biosynthetic pathway proposed at the gene level
-
Misawa N et al (1995) Structure and functional analysis of a marine bacterial carotenoid biosynthesis gene cluster and astaxanthin biosynthetic pathway proposed at the gene level. J Bacteriol 177:6575-6584
-
(1995)
J Bacteriol
, vol.177
, pp. 6575-6584
-
-
Misawa, N.1
-
26
-
-
5544272846
-
Description of Algoriphagus aquimarinus sp. nov., Algoriphagus chordae sp. nov. and Algoriphagus winogradskyi sp. nov., from sea water and algae, transfer of Hongiella halophila Yi and Chun 2004 to the genus Algoriphagus as Algoriphagus halophilus comb. nov. and emended descriptions of the genera Algoriphagus Bowman et al. 2003 and Hongiella Yi and Chun 2004
-
Nedashkovskaya OI et al (2004) Description of Algoriphagus aquimarinus sp. nov., Algoriphagus chordae sp. nov. and Algoriphagus winogradskyi sp. nov., from sea water and algae, transfer of Hongiella halophila Yi and Chun 2004 to the genus Algoriphagus as Algoriphagus halophilus comb. nov. and emended descriptions of the genera Algoriphagus Bowman et al. 2003 and Hongiella Yi and Chun 2004. Int J Syst Evol Microbiol 54:1757-1764
-
(2004)
Int J Syst Evol Microbiol
, vol.54
, pp. 1757-1764
-
-
Nedashkovskaya, O.I.1
-
27
-
-
0031025703
-
Isolation and characterization of the carotenoid biosynthesis genes of Flavobacterium sp. strain R1534
-
Pasamontes L, Hug D, Tessier M, Hohmann HP, Schierle J, van Loon AP (1997) Isolation and characterization of the carotenoid biosynthesis genes of Flavobacterium sp. strain R1534. Gene 185:35-41
-
(1997)
Gene
, vol.185
, pp. 35-41
-
-
Pasamontes, L.1
Hug, D.2
Tessier, M.3
Hohmann, H.P.4
Schierle, J.5
Van Loon, A.P.6
-
28
-
-
0036094210
-
Identification of a lycopene beta-cyclase required for bacteriorhodopsin biogenesis in the archaeon Halobacterium salinarum
-
Peck RF, Johnson EA, Krebs MP (2002) Identification of a lycopene beta-cyclase required for bacteriorhodopsin biogenesis in the archaeon Halobacterium salinarum. J Bacteriol 184:2889-2897
-
(2002)
J Bacteriol
, vol.184
, pp. 2889-2897
-
-
Peck, R.F.1
Johnson, E.A.2
Krebs, M.P.3
-
29
-
-
0030087993
-
Cloning and characterization of the cDNA for lycopene beta-cyclase from tomato reveals decrease in its expression during fruit ripening
-
Pecker I, Gabbay R, Cunningham FX Jr, Hirschberg J (1996) Cloning and characterization of the cDNA for lycopene beta-cyclase from tomato reveals decrease in its expression during fruit ripening. Plant Mol Biol 30:807-819
-
(1996)
Plant Mol Biol
, vol.30
, pp. 807-819
-
-
Pecker, I.1
Gabbay, R.2
Cunningham Jr., F.X.3
Hirschberg, J.4
-
30
-
-
0037022221
-
Studies on the nonmevalonate terpene biosynthetic pathway: Metabolic role of IspH (LytB) protein
-
USA
-
Rohdich F et al (2002) Studies on the nonmevalonate terpene biosynthetic pathway: metabolic role of IspH (LytB) protein. Proc Natl Acad Sci USA 99:1158-1163
-
(2002)
Proc Natl Acad Sci
, vol.99
, pp. 1158-1163
-
-
Rohdich, F.1
-
31
-
-
0029922877
-
Glyceraldehyde-3-phosphate and pyruvate as precursors of isoprenic units in an alternative non-mevalonate pathway for terpenoid biosynthesis
-
Rohmer M, Seemann M, Horbach S, Bringer-Meyer S, Sarm H (1996) Glyceraldehyde-3-phosphate and pyruvate as precursors of isoprenic units in an alternative non-mevalonate pathway for terpenoid biosynthesis. J Am Chem Soc 118:2564-2566
-
(1996)
J Am Chem Soc
, vol.118
, pp. 2564-2566
-
-
Rohmer, M.1
Seemann, M.2
Horbach, S.3
Bringer-Meyer, S.4
Sarm, H.5
-
32
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
33
-
-
0029870908
-
Expression, purification and properties of lycopene cyclase from Erwinia uredovora
-
Schnurr G, Misawa N, Sandmann G (1996) Expression, purification and properties of lycopene cyclase from Erwinia uredovora. Biochem J 315(Pt 3):869-874
-
(1996)
Biochem J
, vol.315
, Issue.3 PART
, pp. 869-874
-
-
Schnurr, G.1
Misawa, N.2
Sandmann, G.3
-
34
-
-
1842687080
-
Asymmetrically acting lycopene β-cyclases (CrtLm) from non-photosynthetic bacteria
-
Tao L, Picataggio S, Rouviere PE, Cheng Q (2004) Asymmetrically acting lycopene β-cyclases (CrtLm) from non-photosynthetic bacteria. Mol Gen Genomics 271:180-188
-
(2004)
Mol Gen Genomics
, vol.271
, pp. 180-188
-
-
Tao, L.1
Picataggio, S.2
Rouviere, P.E.3
Cheng, Q.4
-
35
-
-
0038202072
-
Structural and functional analysis of a lycopene beta-monocyclase gene isolated from a unique marine bacterium that produces myxol
-
Teramoto M, Takaichi S, Inomata Y, Ikenaga H, Misawa N (2003) Structural and functional analysis of a lycopene beta-monocyclase gene isolated from a unique marine bacterium that produces myxol. FEBS Lett 545:120-126
-
(2003)
FEBS Lett
, vol.545
, pp. 120-126
-
-
Teramoto, M.1
Takaichi, S.2
Inomata, Y.3
Ikenaga, H.4
Misawa, N.5
-
36
-
-
0031574072
-
The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
37
-
-
0033867275
-
A bifunctional enzyme with lycopene cyclase and phytoene synthase activities is encoded by the carRP gene of Mucor circinelloides
-
Velayos A, Eslava AP, Iturriaga EA (2000) A bifunctional enzyme with lycopene cyclase and phytoene synthase activities is encoded by the carRP gene of Mucor circinelloides. Eur J Biochem 267:5509-5519
-
(2000)
Eur J Biochem
, vol.267
, pp. 5509-5519
-
-
Velayos, A.1
Eslava, A.P.2
Iturriaga, E.A.3
-
38
-
-
0032722810
-
Isolation and functional characterisation of a novel type of carotenoid biosynthetic gene from Xanthophyllomyces dendrorhous
-
Verdoes JC, Krubasik KP, Sandmann G, van Ooyen AJ (1999) Isolation and functional characterisation of a novel type of carotenoid biosynthetic gene from Xanthophyllomyces dendrorhous. Mol Gen Genet 262:453-461
-
(1999)
Mol Gen Genet
, vol.262
, pp. 453-461
-
-
Verdoes, J.C.1
Krubasik, K.P.2
Sandmann, G.3
Van Ooyen, A.J.4
-
39
-
-
0034213794
-
Structural and functional analysis of the gene cluster encoding carotenoid biosynthesis in Mycobacterium aurum A+
-
Viveiros M, Krubasik P, Sandmann G, Houssaini-Iraqui M (2000) Structural and functional analysis of the gene cluster encoding carotenoid biosynthesis in Mycobacterium aurum A+. FEMS Microbiol Lett 187:95-101
-
(2000)
FEMS Microbiol Lett
, vol.187
, pp. 95-101
-
-
Viveiros, M.1
Krubasik, P.2
Sandmann, G.3
Houssaini-Iraqui, M.4
-
40
-
-
18544403253
-
Identification, evolution, and essentiality of the mevalonate pathway for isopentenyl diphosphate biosynthesis in gram-positive cocci
-
Wilding EI et al (2000) Identification, evolution, and essentiality of the mevalonate pathway for isopentenyl diphosphate biosynthesis in gram-positive cocci. J Bacteriol 182:4319-4327
-
(2000)
J Bacteriol
, vol.182
, pp. 4319-4327
-
-
Wilding, E.I.1
-
41
-
-
0029005715
-
Composition and presumed biosynthetic pathway of carotenoids in the astaxanthin-producing bacterium Agrobacterium aurantiacum
-
Yokoyama A, Miki W (1995) Composition and presumed biosynthetic pathway of carotenoids in the astaxanthin-producing bacterium Agrobacterium aurantiacum. FEMS Microbiol Lett 128:139-144
-
(1995)
FEMS Microbiol Lett
, vol.128
, pp. 139-144
-
-
Yokoyama, A.1
Miki, W.2
|