-
1
-
-
0034712743
-
The new animal phylogeny: reliability and implications
-
Adoutte A., Balavoine G., Lartillot N., Lespinet O., Prud'homme B., and De Rosa R. The new animal phylogeny: reliability and implications. Proc. Natl. Acad. Sci. USA 97 (2000) 4453-4456
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 4453-4456
-
-
Adoutte, A.1
Balavoine, G.2
Lartillot, N.3
Lespinet, O.4
Prud'homme, B.5
De Rosa, R.6
-
2
-
-
0019423856
-
Sequence and organization of the human mitochondrial genome
-
Anderson S., Bankier A.T., Barrell B.G., De Bruijn M.H.L., and Coulson A.R. Sequence and organization of the human mitochondrial genome. Nature 290 (1981) 457-465
-
(1981)
Nature
, vol.290
, pp. 457-465
-
-
Anderson, S.1
Bankier, A.T.2
Barrell, B.G.3
De Bruijn, M.H.L.4
Coulson, A.R.5
-
3
-
-
1842427267
-
Bilaterian phylogeny based on analyses of a region of the sodium-potassium ATPase α-subunit gene
-
Anderson F.E., Córdoba A.J., and Thollesson M. Bilaterian phylogeny based on analyses of a region of the sodium-potassium ATPase α-subunit gene. J. Mol. Evol. 58 (2004) 252-268
-
(2004)
J. Mol. Evol.
, vol.58
, pp. 252-268
-
-
Anderson, F.E.1
Córdoba, A.J.2
Thollesson, M.3
-
4
-
-
0037062433
-
Mammalian mitogenomic relationships and the root of the eutherian tree
-
Arnason U., Adegoke J.A., Bodin K., Born E.W., Esa Y.B., Gullberg A., Nilsson M., Short R.V., Xu X.F., and Janke A. Mammalian mitogenomic relationships and the root of the eutherian tree. Proc. Natl. Acad. Sci. USA 99 (2002) 8151-8156
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 8151-8156
-
-
Arnason, U.1
Adegoke, J.A.2
Bodin, K.3
Born, E.W.4
Esa, Y.B.5
Gullberg, A.6
Nilsson, M.7
Short, R.V.8
Xu, X.F.9
Janke, A.10
-
5
-
-
1642285792
-
The incomplete natural history of mitochondria
-
Ballard J.W.O., and Whitlock M.C. The incomplete natural history of mitochondria. Mol. Ecol. 13 (2004) 729
-
(2004)
Mol. Ecol.
, vol.13
, pp. 729
-
-
Ballard, J.W.O.1
Whitlock, M.C.2
-
6
-
-
84912595151
-
-
Elsevier, Amsterdam
-
Benne R., Van Den Burg J., Brakenhoff J., De Vries B., Nederlor P., et al. Mitochondrial genes in trypanosomes: abnormal initiator triplets, a conserved frameshift in the gene for cytochrome oxidase subunit II and evidence for a novel mechanism of gene expression (1985), Elsevier, Amsterdam
-
(1985)
Mitochondrial genes in trypanosomes: abnormal initiator triplets, a conserved frameshift in the gene for cytochrome oxidase subunit II and evidence for a novel mechanism of gene expression
-
-
Benne, R.1
Van Den Burg, J.2
Brakenhoff, J.3
De Vries, B.4
Nederlor, P.5
-
8
-
-
0033999959
-
Frequent assimilation of mitochondrial DNA by grasshoppers nuclear genomes
-
Bensasson D., Zhang D.X., and Hewitt G.M. Frequent assimilation of mitochondrial DNA by grasshoppers nuclear genomes. Mol. Biol. Evol. 17 (2000) 406-415
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 406-415
-
-
Bensasson, D.1
Zhang, D.X.2
Hewitt, G.M.3
-
9
-
-
0033561361
-
Animal mitochondrial genomes
-
Boore J.L. Animal mitochondrial genomes. Nucleic Acids Res. 27 (1999) 1767-1780
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 1767-1780
-
-
Boore, J.L.1
-
10
-
-
0027981455
-
Complete DNA sequence of the mitochondrial genome of the black chiton, Katharina tunicata
-
Boore J.L., and Brown W.M. Complete DNA sequence of the mitochondrial genome of the black chiton, Katharina tunicata. Genetics 138 (1994) 423-443
-
(1994)
Genetics
, vol.138
, pp. 423-443
-
-
Boore, J.L.1
Brown, W.M.2
-
11
-
-
0029144398
-
Complete sequence of the mitochondrial DNA of the annelid worm Lumbricus terrestris
-
Boore J.L., and Brown W.M. Complete sequence of the mitochondrial DNA of the annelid worm Lumbricus terrestris. Genetics 141 (1995) 305-319
-
(1995)
Genetics
, vol.141
, pp. 305-319
-
-
Boore, J.L.1
Brown, W.M.2
-
12
-
-
0031769998
-
Big trees from little genomes: mitochondrial gene order as a phylogenetic tool
-
Boore J.L., and Brown W.M. Big trees from little genomes: mitochondrial gene order as a phylogenetic tool. Curr. Opin. Genet. Dev. 8 (1998) 668-674
-
(1998)
Curr. Opin. Genet. Dev.
, vol.8
, pp. 668-674
-
-
Boore, J.L.1
Brown, W.M.2
-
13
-
-
0033977831
-
Mitochondrial genomes of Galathealinum, Helobdella, and Platynereis: sequence and gene arrangement comparisons indicate that pogonophora is not a phylum and annelida and arthropoda are not sister taxa
-
Boore J.L., and Brown W.M. Mitochondrial genomes of Galathealinum, Helobdella, and Platynereis: sequence and gene arrangement comparisons indicate that pogonophora is not a phylum and annelida and arthropoda are not sister taxa. Mol. Biol. Evol. 17 (2000) 87-106
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 87-106
-
-
Boore, J.L.1
Brown, W.M.2
-
14
-
-
3242790356
-
Complete sequences of the highly rearranged molluscan mitochondrial genomes of the scaphopod Graptacme eborea and the bivalve Mytilus edulis
-
Boore J.L., Medina M., and Rosenberg L.A. Complete sequences of the highly rearranged molluscan mitochondrial genomes of the scaphopod Graptacme eborea and the bivalve Mytilus edulis. Mol. Biol. Evol. 21 (2004) 1492-1503
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 1492-1503
-
-
Boore, J.L.1
Medina, M.2
Rosenberg, L.A.3
-
15
-
-
0003600825
-
-
Sinauer Associates, Sunderland, Massachusetts 01375, USA
-
Brusca R.C., and Brusca G.J. Invertebrates (1990), Sinauer Associates, Sunderland, Massachusetts 01375, USA
-
(1990)
Invertebrates
-
-
Brusca, R.C.1
Brusca, G.J.2
-
16
-
-
0031663016
-
A revised six-kingdom system of life
-
Cavalier-Smith T. A revised six-kingdom system of life. Biol. Rev. 73 (1998) 203-266
-
(1998)
Biol. Rev.
, vol.73
, pp. 203-266
-
-
Cavalier-Smith, T.1
-
17
-
-
0022271984
-
The mitochondrial DNA molecule of Drosophila yakuba: nucleotide sequence, gene organization, and genetic code
-
Clary D.O., and Wolstenholme D.R. The mitochondrial DNA molecule of Drosophila yakuba: nucleotide sequence, gene organization, and genetic code. J. Mol. Evol. 22 (1985) 252-271
-
(1985)
J. Mol. Evol.
, vol.22
, pp. 252-271
-
-
Clary, D.O.1
Wolstenholme, D.R.2
-
18
-
-
0034615125
-
Monophyly of brachiopods and phoronids: reconciliation of molecular evidence with Linnaean classification (the subphylum Phoroniformea nov.)
-
Cohen B.L. Monophyly of brachiopods and phoronids: reconciliation of molecular evidence with Linnaean classification (the subphylum Phoroniformea nov.). Proc. R Soc. B 267 (2000) 225-231
-
(2000)
Proc. R Soc. B
, vol.267
, pp. 225-231
-
-
Cohen, B.L.1
-
19
-
-
0032578991
-
Molecular phylogeny of brachiopods and phoronids based on nuclear-encoded small subunit ribosomal RNA gene sequences
-
Cohen B.L., Gawthrop A., and Cavalier-Smith T. Molecular phylogeny of brachiopods and phoronids based on nuclear-encoded small subunit ribosomal RNA gene sequences. Philos. Trans. R Soc. B 353 (1998) 2039-2061
-
(1998)
Philos. Trans. R Soc. B
, vol.353
, pp. 2039-2061
-
-
Cohen, B.L.1
Gawthrop, A.2
Cavalier-Smith, T.3
-
20
-
-
0032557037
-
Comparison of articulate brachiopod nuclear and mitochondrial gene trees leads to a clade-based redefinition of protostomes (Protostomozoa) and deuterostomes (Deuterostomozoa)
-
Cohen B.L., Stark S., Gawthrop A.B., Bourke M.E., and Thayer C.W. Comparison of articulate brachiopod nuclear and mitochondrial gene trees leads to a clade-based redefinition of protostomes (Protostomozoa) and deuterostomes (Deuterostomozoa). Proc. R Soc. B 265 (1998) 475-482
-
(1998)
Proc. R Soc. B
, vol.265
, pp. 475-482
-
-
Cohen, B.L.1
Stark, S.2
Gawthrop, A.B.3
Bourke, M.E.4
Thayer, C.W.5
-
21
-
-
24044511196
-
Mitochondrial genomes suggest that hexapods and crustaceans are mutually paraphyletic
-
Cook C.E., Yue Q.Y., and Akam M. Mitochondrial genomes suggest that hexapods and crustaceans are mutually paraphyletic. Proc. R Soc. B 272 (2005) 1295-1304
-
(2005)
Proc. R Soc. B
, vol.272
, pp. 1295-1304
-
-
Cook, C.E.1
Yue, Q.Y.2
Akam, M.3
-
22
-
-
0035527389
-
Molecular data indicate the protostome affinity of brachiopods
-
De Rosa R. Molecular data indicate the protostome affinity of brachiopods. Syst. Biol. 50 (2001) 848-859
-
(2001)
Syst. Biol.
, vol.50
, pp. 848-859
-
-
De Rosa, R.1
-
23
-
-
0038325886
-
-
Herrera-Cubilla A., and Jackson J.B.C. (Eds), Smithsonian Tropical Research Institute, Balboa, Republic of Panama
-
Dick M.H., Freeland J.R., Williams L.P., and Coggenshall-Burr M. In: Herrera-Cubilla A., and Jackson J.B.C. (Eds). Proceedings of the 11th International Bryozoology Association Conference vol. 11 (2000), Smithsonian Tropical Research Institute, Balboa, Republic of Panama 197-210
-
(2000)
Proceedings of the 11th International Bryozoology Association Conference
, vol.11
, pp. 197-210
-
-
Dick, M.H.1
Freeland, J.R.2
Williams, L.P.3
Coggenshall-Burr, M.4
-
24
-
-
0033062252
-
Evolutionary dynamics of a mitochondrial rearrangement "hot spot" in the Hymenoptera
-
Dowton M., and Austin A.D. Evolutionary dynamics of a mitochondrial rearrangement "hot spot" in the Hymenoptera. Mol. Biol. Evol. 16 (1999) 298-309
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 298-309
-
-
Dowton, M.1
Austin, A.D.2
-
25
-
-
3042666256
-
MUSCLE: multiple sequence alignment with high accuracy and high throughput
-
Edgar R.C. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32 (2004) 1792-1797
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
27
-
-
0008886678
-
Un nouvel embranchement: les Lophophorates
-
Emig C.C. Un nouvel embranchement: les Lophophorates. Bull. Soc. Zool. France 102 (1977) 341-344
-
(1977)
Bull. Soc. Zool. France
, vol.102
, pp. 341-344
-
-
Emig, C.C.1
-
28
-
-
0002536015
-
The biology of Phoronida
-
Emig C.C. The biology of Phoronida. Adv. Mar. Biol. 19 (1982) 1-89
-
(1982)
Adv. Mar. Biol.
, vol.19
, pp. 1-89
-
-
Emig, C.C.1
-
30
-
-
0023823442
-
Molecular phylogeny of the Animal Kingdom
-
Field K.G., Olsen G.J., Lane D.J., Giovannoni S.J., Ghiselin M.T., Raff E.C., Pace N.R., and Raff R.A. Molecular phylogeny of the Animal Kingdom. Science 239 (1988) 748-753
-
(1988)
Science
, vol.239
, pp. 748-753
-
-
Field, K.G.1
Olsen, G.J.2
Lane, D.J.3
Giovannoni, S.J.4
Ghiselin, M.T.5
Raff, E.C.6
Pace, N.R.7
Raff, R.A.8
-
31
-
-
0028528103
-
DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates
-
Folmer O., Black M., Hoeh W., Lutz R., and Vrijenhoek R. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol. Mar. Biol. Biotechnol. 3 (1994) 294-299
-
(1994)
Mol. Mar. Biol. Biotechnol.
, vol.3
, pp. 294-299
-
-
Folmer, O.1
Black, M.2
Hoeh, W.3
Lutz, R.4
Vrijenhoek, R.5
-
32
-
-
0023495256
-
Natural variation in the genetic code
-
Fox T.D. Natural variation in the genetic code. Annu. Rev. Genet. 21 (1987) 67-91
-
(1987)
Annu. Rev. Genet.
, vol.21
, pp. 67-91
-
-
Fox, T.D.1
-
33
-
-
0022413838
-
Mitochondrial DNA-like sequences in the human nuclear genome
-
Fukada M., Wakasugi S., Tsuzuki R., Nomiyama H., Shimada K., and Miyata T. Mitochondrial DNA-like sequences in the human nuclear genome. J. Mol. Biol. 186 (1985) 257-266
-
(1985)
J. Mol. Biol.
, vol.186
, pp. 257-266
-
-
Fukada, M.1
Wakasugi, S.2
Tsuzuki, R.3
Nomiyama, H.4
Shimada, K.5
Miyata, T.6
-
34
-
-
0023074940
-
Gene transfer: mitochondria to nucleus
-
Gellissen G., and Michaelis G. Gene transfer: mitochondria to nucleus. Ann. NY Acad. Sci. 503 (1987) 391-401
-
(1987)
Ann. NY Acad. Sci.
, vol.503
, pp. 391-401
-
-
Gellissen, G.1
Michaelis, G.2
-
35
-
-
12344282043
-
A comprehensive analysis of mammalian mitochondrial genome base composition and improved phylogenetic methods
-
Gibson A., Gowri-Shankar V., Higgs P.G., and Rattray M. A comprehensive analysis of mammalian mitochondrial genome base composition and improved phylogenetic methods. Mol. Biol. Evol. 22 (2005) 251
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 251
-
-
Gibson, A.1
Gowri-Shankar, V.2
Higgs, P.G.3
Rattray, M.4
-
36
-
-
0034350325
-
Triploblastic relationships with emphasis on the acoelomates and the position of Gnathostomulida, Cycliophora, Platyhelminthes, and Chaetognatha: a combined approach of 18S rDNA sequences an morphology
-
Giribet G., Distel D.L., Polz M., Sterrer W., and Wheeler W.C. Triploblastic relationships with emphasis on the acoelomates and the position of Gnathostomulida, Cycliophora, Platyhelminthes, and Chaetognatha: a combined approach of 18S rDNA sequences an morphology. Syst. Biol. 49 (2000) 539-562
-
(2000)
Syst. Biol.
, vol.49
, pp. 539-562
-
-
Giribet, G.1
Distel, D.L.2
Polz, M.3
Sterrer, W.4
Wheeler, W.C.5
-
37
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S., and Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52 (2003) 696-704
-
(2003)
Syst. Biol.
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
38
-
-
3242690862
-
The new view of animal phylogeny
-
Halanych K.M. The new view of animal phylogeny. Ann. Rev. Ecol. Evol. Syst. 35 (2004) 229-256
-
(2004)
Ann. Rev. Ecol. Evol. Syst.
, vol.35
, pp. 229-256
-
-
Halanych, K.M.1
-
39
-
-
0028921291
-
Evidence from 18S ribosomal DNA that the lophophorates are protostome animals
-
Halanych K.M., Bacheller J.D., Aguinaldo A.M.A., Liva S.M., Hillis D.M., and Lake J.A. Evidence from 18S ribosomal DNA that the lophophorates are protostome animals. Science 267 (1995) 1641-1643
-
(1995)
Science
, vol.267
, pp. 1641-1643
-
-
Halanych, K.M.1
Bacheller, J.D.2
Aguinaldo, A.M.A.3
Liva, S.M.4
Hillis, D.M.5
Lake, J.A.6
-
40
-
-
33745177609
-
Phylogeny and divergence time estimation of cheilostome bryozoans based on mitochondrial 16S rRNA sequences
-
Hao J.S., Li C.X., and Sun X.Y. Phylogeny and divergence time estimation of cheilostome bryozoans based on mitochondrial 16S rRNA sequences. Chinese Sci. Bull. 50 (2005) 1205-1211
-
(2005)
Chinese Sci. Bull.
, vol.50
, pp. 1205-1211
-
-
Hao, J.S.1
Li, C.X.2
Sun, X.Y.3
-
41
-
-
31544470745
-
Preliminary study on molecular phylogeny of bryozoans based on 18S rRNA gene sequences
-
Hao J.S., Yang Q., Li C.X., Zhang K.Y., and Sun X.Y. Preliminary study on molecular phylogeny of bryozoans based on 18S rRNA gene sequences. Acta Micropaleont. Sin. 19 (2002) 199-205
-
(2002)
Acta Micropaleont. Sin.
, vol.19
, pp. 199-205
-
-
Hao, J.S.1
Yang, Q.2
Li, C.X.3
Zhang, K.Y.4
Sun, X.Y.5
-
42
-
-
0038781901
-
Codon bias variation in C-mos between squamate families might distort phylogenetic inferences
-
Harris D.J. Codon bias variation in C-mos between squamate families might distort phylogenetic inferences. Mol. Phylogenet. Evol. 27 (2003) 540
-
(2003)
Mol. Phylogenet. Evol.
, vol.27
, pp. 540
-
-
Harris, D.J.1
-
43
-
-
19044389661
-
Evidence for multiple reversals of asymmetric mutational constraints during the evolution of the mitochondrial genome of Metazoa, and consequences for phylogenetic inferences
-
Hassanin A., Leger N., and Deutsch J. Evidence for multiple reversals of asymmetric mutational constraints during the evolution of the mitochondrial genome of Metazoa, and consequences for phylogenetic inferences. Syst. Biol. 54 (2005) 277
-
(2005)
Syst. Biol.
, vol.54
, pp. 277
-
-
Hassanin, A.1
Leger, N.2
Deutsch, J.3
-
44
-
-
0029059714
-
Complete sequence and gene organization of the mitochondrial genome of the land snail Albinaria coerulea
-
Hatzoglou E., Rodakis G.C., and Lecanidou R. Complete sequence and gene organization of the mitochondrial genome of the land snail Albinaria coerulea. Genetics 140 (1995) 1353-1366
-
(1995)
Genetics
, vol.140
, pp. 1353-1366
-
-
Hatzoglou, E.1
Rodakis, G.C.2
Lecanidou, R.3
-
45
-
-
33745173060
-
-
Hayward, P.J., Ryland, J.S. (Eds.) 1998. Cheilostomatous Bryozoa Part 1 Aeteoidea-Cribrilinoidea, Brill and Backhuys.
-
-
-
-
46
-
-
1242352073
-
The mitochondrial genome of Phoronis architecta-comparisons demonstrate that phoronids are lophotrochozoan protostomes
-
Helfenbein K.G., and Boore J.L. The mitochondrial genome of Phoronis architecta-comparisons demonstrate that phoronids are lophotrochozoan protostomes. Mol. Biol. Evol. 21 (2004) 153-157
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 153-157
-
-
Helfenbein, K.G.1
Boore, J.L.2
-
47
-
-
0034882968
-
The complete mitochondrial genome of the articulate brachiopod Terebratalia transversa
-
Helfenbein K.G., Brown W.M., and Boore J.L. The complete mitochondrial genome of the articulate brachiopod Terebratalia transversa. Mol. Biol. Evol. 18 (2001) 1734-1744
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 1734-1744
-
-
Helfenbein, K.G.1
Brown, W.M.2
Boore, J.L.3
-
48
-
-
3242702091
-
The mitochondrial genome of Paraspadella gotoi is highly reduced and reveals that chaetognaths are a sister group to protostomes
-
Helfenbein K.G., Fourcade H.M., Vanjani R.G., and Boore J.L. The mitochondrial genome of Paraspadella gotoi is highly reduced and reveals that chaetognaths are a sister group to protostomes. Proc. Natl. Acad. Sci. USA 101 (2004) 10639-10643
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 10639-10643
-
-
Helfenbein, K.G.1
Fourcade, H.M.2
Vanjani, R.G.3
Boore, J.L.4
-
49
-
-
0035732091
-
Molecular phylogeography of the cosmopolitan bryozoan Celleporella hyalina: cryptic speciation?
-
Hoare K., Goldson A.J., Giannasi N., and Hughes R.N. Molecular phylogeography of the cosmopolitan bryozoan Celleporella hyalina: cryptic speciation?. Mol. Phylogenet. Evol. 18 (2001) 488-492
-
(2001)
Mol. Phylogenet. Evol.
, vol.18
, pp. 488-492
-
-
Hoare, K.1
Goldson, A.J.2
Giannasi, N.3
Hughes, R.N.4
-
50
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogenetic trees
-
Huelsenbeck J.P., and Ronquist F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17 (2001) 754-755
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
51
-
-
0004045615
-
-
McGraw-Hill, New York
-
Hyman L.H. The Invertebrates: smaller coelomate groups, Chaetognatha, Hemichordata, Pogonophora, Phoronida, Ectoprocta, Brachiopoda, Sipunculida, the coelomate Bilateria (1959), McGraw-Hill, New York
-
(1959)
The Invertebrates: smaller coelomate groups, Chaetognatha, Hemichordata, Pogonophora, Phoronida, Ectoprocta, Brachiopoda, Sipunculida, the coelomate Bilateria
-
-
Hyman, L.H.1
-
52
-
-
0024292930
-
Nucleotide sequence and gene organization of sea urchin mitochondrial DNA
-
Jacobs H.T., Elliott D.J., Math V.B., and Farquharson A. Nucleotide sequence and gene organization of sea urchin mitochondrial DNA. J. Mol. Biol. 202 (1988) 185-217
-
(1988)
J. Mol. Biol.
, vol.202
, pp. 185-217
-
-
Jacobs, H.T.1
Elliott, D.J.2
Math, V.B.3
Farquharson, A.4
-
53
-
-
12344332806
-
Mitochondrial genomes of Clymenella torquata (Maldanidae) and Riftia pachyptila (Siboglinidae): evidence for conserved gene order in Annelida
-
Jennings R.M., and Halanych K.M. Mitochondrial genomes of Clymenella torquata (Maldanidae) and Riftia pachyptila (Siboglinidae): evidence for conserved gene order in Annelida. Mol. Biol. Evol. 22 (2005) 210-222
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 210-222
-
-
Jennings, R.M.1
Halanych, K.M.2
-
54
-
-
17744381377
-
Mitochondrial genomes of two demosponges provide insights into an early stage of animal evolution
-
Lavrov D.V., Forget L., Kelly M., and Lang B.F. Mitochondrial genomes of two demosponges provide insights into an early stage of animal evolution. Mol. Biol. Evol. 22 (2005) 1231
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 1231
-
-
Lavrov, D.V.1
Forget, L.2
Kelly, M.3
Lang, B.F.4
-
55
-
-
0033917042
-
Phylogenies inferred from mitochondrial gene orders-a cautionary tale from the parasitic flatworms
-
Le T.H., Blair D., Agatsuma T., Humair P.F., Campbell N.J.H., Iwagami M., Littlewood D.T.J., Peacock B., Johnston D.A., Bartley J., Rollinson D., Herniou E.A., Zarlenga D.S., and McManus D.P. Phylogenies inferred from mitochondrial gene orders-a cautionary tale from the parasitic flatworms. Mol. Biol. Evol. 17 (2000) 1123-1125
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 1123-1125
-
-
Le, T.H.1
Blair, D.2
Agatsuma, T.3
Humair, P.F.4
Campbell, N.J.H.5
Iwagami, M.6
Littlewood, D.T.J.7
Peacock, B.8
Johnston, D.A.9
Bartley, J.10
Rollinson, D.11
Herniou, E.A.12
Zarlenga, D.S.13
McManus, D.P.14
-
56
-
-
4344579582
-
Phylogenetic relationships among amphisbaenian reptiles based on complete mitochondrial genomic sequences
-
Macey J.R., Papenfuss T.J., Kuehl J.V., Fourcade H.M., and Boore J.L. Phylogenetic relationships among amphisbaenian reptiles based on complete mitochondrial genomic sequences. Mol. Phylogenet. Evol. 33 (2004) 22
-
(2004)
Mol. Phylogenet. Evol.
, vol.33
, pp. 22
-
-
Macey, J.R.1
Papenfuss, T.J.2
Kuehl, J.V.3
Fourcade, H.M.4
Boore, J.L.5
-
57
-
-
0029889447
-
18S rRNA suggests that Entoprocta are protostomes, unrelated to Ectoprocta
-
Mackey L.Y., Winnepennincks B., De Wachter R., Backeljau T., Emschermann P., and Garey J.R. 18S rRNA suggests that Entoprocta are protostomes, unrelated to Ectoprocta. J. Mol. Evol. 42 (1996) 552-559
-
(1996)
J. Mol. Evol.
, vol.42
, pp. 552-559
-
-
Mackey, L.Y.1
Winnepennincks, B.2
De Wachter, R.3
Backeljau, T.4
Emschermann, P.5
Garey, J.R.6
-
58
-
-
21144455899
-
-
Wyse Jackson P.N., Buttler C.J., and Spencer Jones M.E. (Eds), A.A. Balkema, Dublin, Ireland
-
Mackie J.A., Keough M.J., Norman J.A., and Christidis L. In: Wyse Jackson P.N., Buttler C.J., and Spencer Jones M.E. (Eds). Proceedings of the 12th International Bryozoology Association Conference (2001), A.A. Balkema, Dublin, Ireland 199-206
-
(2001)
Proceedings of the 12th International Bryozoology Association Conference
, pp. 199-206
-
-
Mackie, J.A.1
Keough, M.J.2
Norman, J.A.3
Christidis, L.4
-
59
-
-
33745161784
-
-
Maddison, W.P., Maddison, D.R. 2005. MacClade. Version 4.07. Sinauer Associates, Sunderland, Massachusetts.
-
-
-
-
60
-
-
1942533489
-
The complete mitochondrial genome sequence of the spider Habronattus oregonensis reveals rearranged and extremely truncated tRNAs
-
Masta S.E., and Boore J.L. The complete mitochondrial genome sequence of the spider Habronattus oregonensis reveals rearranged and extremely truncated tRNAs. Mol. Biol. Evol. 21 (2004) 893-902
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 893-902
-
-
Masta, S.E.1
Boore, J.L.2
-
61
-
-
0038075571
-
Cryptic species, cryptic endosymbionts, and geographical variation in chemical defenses in the bryozoan Bugula neritina
-
McGovern T.M., and Hellberg M.E. Cryptic species, cryptic endosymbionts, and geographical variation in chemical defenses in the bryozoan Bugula neritina. Mol. Ecol. 12 (2003) 1207-1215
-
(2003)
Mol. Ecol.
, vol.12
, pp. 1207-1215
-
-
McGovern, T.M.1
Hellberg, M.E.2
-
62
-
-
0031851853
-
GCUA (General Codon Usage Analysis)
-
McInerney J. GCUA (General Codon Usage Analysis). Bioinformatics 14 (1998) 372-373
-
(1998)
Bioinformatics
, vol.14
, pp. 372-373
-
-
McInerney, J.1
-
65
-
-
23844520968
-
Steps toward accurate reconstructions of phylogenies from gene-order data
-
Moret B.M.E., Tang J.J., Wang L.S., and Warnow T. Steps toward accurate reconstructions of phylogenies from gene-order data. J. Comp. Syst. Sci. 65 (2002) 508
-
(2002)
J. Comp. Syst. Sci.
, vol.65
, pp. 508
-
-
Moret, B.M.E.1
Tang, J.J.2
Wang, L.S.3
Warnow, T.4
-
67
-
-
0001772782
-
Animal phylogeny in the light of the trochea theory
-
Nielsen C. Animal phylogeny in the light of the trochea theory. Biol. J. Linn. Soc. 25 (1985) 243-299
-
(1985)
Biol. J. Linn. Soc.
, vol.25
, pp. 243-299
-
-
Nielsen, C.1
-
68
-
-
0000404758
-
Structure and function of metazoan ciliary bands and their phylogenetic significance
-
Nielsen C. Structure and function of metazoan ciliary bands and their phylogenetic significance. Acta Zool. 68 (1987) 205-262
-
(1987)
Acta Zool.
, vol.68
, pp. 205-262
-
-
Nielsen, C.1
-
69
-
-
0036625764
-
The phylogenetic position of Entoprocta, Ectoprocta, Phoronida and Brachiopoda
-
Nielsen C. The phylogenetic position of Entoprocta, Ectoprocta, Phoronida and Brachiopoda. Integ. Comp. Biol. 42 (2002) 685-691
-
(2002)
Integ. Comp. Biol.
, vol.42
, pp. 685-691
-
-
Nielsen, C.1
-
71
-
-
0034096751
-
The mitochondrial genome of the brachiopod Laqueus rubellus
-
Noguchi Y., Endo K., Tajima F., and Ueshima R. The mitochondrial genome of the brachiopod Laqueus rubellus. Genetics 155 (2000) 245-259
-
(2000)
Genetics
, vol.155
, pp. 245-259
-
-
Noguchi, Y.1
Endo, K.2
Tajima, F.3
Ueshima, R.4
-
72
-
-
0019444843
-
tRNA punctuation model of RNA processing in human mitochondria
-
Ojala D., Montoya J., and Attardi G. tRNA punctuation model of RNA processing in human mitochondria. Nature 290 (1981) 470-474
-
(1981)
Nature
, vol.290
, pp. 470-474
-
-
Ojala, D.1
Montoya, J.2
Attardi, G.3
-
73
-
-
0030273578
-
What can molecular genetics contribute to marine biogeography? An urchin's tale
-
Palumbi S.R. What can molecular genetics contribute to marine biogeography? An urchin's tale. J. Exp. Mar. Biol. Ecol. 203 (1996) 75-92
-
(1996)
J. Exp. Mar. Biol. Ecol.
, vol.203
, pp. 75-92
-
-
Palumbi, S.R.1
-
74
-
-
6344272230
-
Identification of chaetognaths as protostomes is supported by the analysis of their mitochondrial genome
-
Papillon D., Perez Y., Caubit X., and Le Parco Y. Identification of chaetognaths as protostomes is supported by the analysis of their mitochondrial genome. Mol. Biol. Evol. 21 (2004) 2122-2129
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 2122-2129
-
-
Papillon, D.1
Perez, Y.2
Caubit, X.3
Le Parco, Y.4
-
75
-
-
3242713476
-
Evidence from Hox genes that bryozoans are lophotrochozoans
-
Passamaneck Y.L., and Halanych K.M. Evidence from Hox genes that bryozoans are lophotrochozoans. Evol. Develop. 6 (2004) 275-281
-
(2004)
Evol. Develop.
, vol.6
, pp. 275-281
-
-
Passamaneck, Y.L.1
Halanych, K.M.2
-
76
-
-
0029049426
-
Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes
-
Perna N.T., and Kocher T.D. Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes. J. Mol. Evol. 41 (1995) 353-358
-
(1995)
J. Mol. Evol.
, vol.41
, pp. 353-358
-
-
Perna, N.T.1
Kocher, T.D.2
-
77
-
-
0034945410
-
Animal phylogeny and the ancestry of bilaterians: inferences from morphology and 18S rDNA gene sequences
-
Peterson K.J., and Eernisse D.J. Animal phylogeny and the ancestry of bilaterians: inferences from morphology and 18S rDNA gene sequences. Evol. Develop. 3 (2001) 170-205
-
(2001)
Evol. Develop.
, vol.3
, pp. 170-205
-
-
Peterson, K.J.1
Eernisse, D.J.2
-
78
-
-
0031979635
-
Mitochondrial DNA of the coral Sarcophyton glaucum contains a gene for a homologue of bacterial MutS: a possible case of gene transfer from the nucleus to the mitochondrion
-
Pont-Kingdon G., Okada N.A., Macfarlane J.L., Beagley C.T., Watkins-Sims C.D., Cavalier-Smith T., Clark-Walker G.D., and Wolstenholme D.R. Mitochondrial DNA of the coral Sarcophyton glaucum contains a gene for a homologue of bacterial MutS: a possible case of gene transfer from the nucleus to the mitochondrion. J. Mol. Evol. 46 (1998) 419-431
-
(1998)
J. Mol. Evol.
, vol.46
, pp. 419-431
-
-
Pont-Kingdon, G.1
Okada, N.A.2
Macfarlane, J.L.3
Beagley, C.T.4
Watkins-Sims, C.D.5
Cavalier-Smith, T.6
Clark-Walker, G.D.7
Wolstenholme, D.R.8
-
79
-
-
1042263957
-
Morphological and genetic characteristics of erect subtidal species of Alcyonidium (Ctenostomata: Bryozoa)
-
Porter J.S. Morphological and genetic characteristics of erect subtidal species of Alcyonidium (Ctenostomata: Bryozoa). J. Mar. Biol. Assoc. UK 84 (2004) 243-252
-
(2004)
J. Mar. Biol. Assoc. UK
, vol.84
, pp. 243-252
-
-
Porter, J.S.1
-
80
-
-
1042267857
-
Species of Alcyonidium (Bryozoa: Ctenostomata) from Antarctica and Magellan Strait, defined by morphological, reproductive and molecular characters
-
Porter J.S., and Hayward P.J. Species of Alcyonidium (Bryozoa: Ctenostomata) from Antarctica and Magellan Strait, defined by morphological, reproductive and molecular characters. J. Mar. Biol. Assoc. UK 84 (2004) 253-265
-
(2004)
J. Mar. Biol. Assoc. UK
, vol.84
, pp. 253-265
-
-
Porter, J.S.1
Hayward, P.J.2
-
82
-
-
0031773680
-
Modeltest: testing the model of DNA substitution
-
Posada D., and Crandall K.A. Modeltest: testing the model of DNA substitution. Bioinformatics 14 (1998) 817-818
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
83
-
-
0347364639
-
Changing identities: tRNA duplication and remolding within animal mitochondrial genomes
-
Rawlings T.A., Collins T.M., and Bieler R. Changing identities: tRNA duplication and remolding within animal mitochondrial genomes. Proc. Natl. Acad. Sci. USA 100 (2003) 15700
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 15700
-
-
Rawlings, T.A.1
Collins, T.M.2
Bieler, R.3
-
84
-
-
33745154427
-
-
Ryland, J.S. 2005. Bryozoa: an introductory overview. In: Wöss, E.R. (Ed.), Moostiere (Bryozoa), vol. 16, pp. 9-20.
-
-
-
-
85
-
-
0033400473
-
Population structure of the widely dispersing marine bryozoan Membranipora membranacea (Cheilostomata): implications for population history, biogeography, and taxonomy
-
Schwaninger H.R. Population structure of the widely dispersing marine bryozoan Membranipora membranacea (Cheilostomata): implications for population history, biogeography, and taxonomy. Mar. Biol. 135 (1999) 411-423
-
(1999)
Mar. Biol.
, vol.135
, pp. 411-423
-
-
Schwaninger, H.R.1
-
86
-
-
1642546958
-
Complete mitochondrial genome DNA sequence for two ophiuroids and a holothuroid: the utility of protein gene sequence and gene maps in the analyses of deep deuterostome phylogeny
-
Scouras A., Beckenbach K., Arndt A., and Smith M.J. Complete mitochondrial genome DNA sequence for two ophiuroids and a holothuroid: the utility of protein gene sequence and gene maps in the analyses of deep deuterostome phylogeny. Mol. Phylogenet. Evol. 31 (2003) 50-65
-
(2003)
Mol. Phylogenet. Evol.
, vol.31
, pp. 50-65
-
-
Scouras, A.1
Beckenbach, K.2
Arndt, A.3
Smith, M.J.4
-
87
-
-
21244453989
-
Novel mitochondrial gene content and gene arrangement indicate illegitimate inter-mtDNA recombination in the chigger mite, Leptotrombidium pallidum
-
Shao R., Mitani H., Barker S.C., Takahashi M., and Fukunaga M. Novel mitochondrial gene content and gene arrangement indicate illegitimate inter-mtDNA recombination in the chigger mite, Leptotrombidium pallidum. J. Mol. Evol. 60 (2005) 764-773
-
(2005)
J. Mol. Evol.
, vol.60
, pp. 764-773
-
-
Shao, R.1
Mitani, H.2
Barker, S.C.3
Takahashi, M.4
Fukunaga, M.5
-
89
-
-
0027301017
-
The phylogeny of echinoderm classes based on mitochondrial gene arrangements
-
Smith M.J., Arndt A., Gorski S., and Fajber E. The phylogeny of echinoderm classes based on mitochondrial gene arrangements. J. Mol. Evol. 36 (1993) 545-554
-
(1993)
J. Mol. Evol.
, vol.36
, pp. 545-554
-
-
Smith, M.J.1
Arndt, A.2
Gorski, S.3
Fajber, E.4
-
90
-
-
0033595767
-
Analysis of the complete mitochondrial DNA sequence of the brachiopod Terebratulina retusa places Brachiopoda within the protostomes
-
Stechmann A., and Schlegel M. Analysis of the complete mitochondrial DNA sequence of the brachiopod Terebratulina retusa places Brachiopoda within the protostomes. Proc. R Soc. B 266 (1999) 2043-2052
-
(1999)
Proc. R Soc. B
, vol.266
, pp. 2043-2052
-
-
Stechmann, A.1
Schlegel, M.2
-
91
-
-
21244500129
-
First sequenced mitochondrial genome from the phylum Acanthocephala (Leptorhynchoides thecatus) and its phylogenetic position with Metazoa
-
Steinauer M.L., Nickol B.B., Broughton R., and Orti{dotless}́ G. First sequenced mitochondrial genome from the phylum Acanthocephala (Leptorhynchoides thecatus) and its phylogenetic position with Metazoa. J. Mol. Evol. 60 (2005) 706-715
-
(2005)
J. Mol. Evol.
, vol.60
, pp. 706-715
-
-
Steinauer, M.L.1
Nickol, B.B.2
Broughton, R.3
Ortí, G.4
-
92
-
-
14644437032
-
Mitochondrial genetic codes evolve to match amino acid requirements of proteins
-
Swire J., Judson O.P., and Burt A. Mitochondrial genetic codes evolve to match amino acid requirements of proteins. J. Mol. Evol. 60 (2005) 128
-
(2005)
J. Mol. Evol.
, vol.60
, pp. 128
-
-
Swire, J.1
Judson, O.P.2
Burt, A.3
-
93
-
-
33745149256
-
-
Swofford, D.L. 2002. PAUP*. Phylogenetic analysis using parsimony (* and other methods). Version 4. Sinauer Associates, Sunderland, Massachusetts.
-
-
-
-
94
-
-
0029971712
-
Complete DNA Sequence of the mitochondrial genome of Cepaea nemoralis (Gastropoda: Pulmonata)
-
Terrett J.A., Miles S., and Thomas R.H. Complete DNA Sequence of the mitochondrial genome of Cepaea nemoralis (Gastropoda: Pulmonata). J. Mol. Evol. 42 (1996) 160-168
-
(1996)
J. Mol. Evol.
, vol.42
, pp. 160-168
-
-
Terrett, J.A.1
Miles, S.2
Thomas, R.H.3
-
95
-
-
0001974447
-
-
Herrera-Cubilla A., and Jackson J.B.C. (Eds), Smithsonian Tropical Research Institute, Balboa, Republic of Panama
-
Todd J.A. In: Herrera-Cubilla A., and Jackson J.B.C. (Eds). Proceedings of the 11th International Bryozoology Association Conference vol. 11 (2000), Smithsonian Tropical Research Institute, Balboa, Republic of Panama 104-135
-
(2000)
Proceedings of the 11th International Bryozoology Association Conference
, vol.11
, pp. 104-135
-
-
Todd, J.A.1
-
96
-
-
0033753855
-
Multiple lineages of the mitochondrial gene NADH dehydrogenase subunit 1 (ND1) in parasitic helminths: implications for molecular evolutionary studies of facultatively anaerobic eukaryotes
-
van Herwerden L., Blair D., and Agatsuma T. Multiple lineages of the mitochondrial gene NADH dehydrogenase subunit 1 (ND1) in parasitic helminths: implications for molecular evolutionary studies of facultatively anaerobic eukaryotes. J. Mol. Evol. 51 (2000) 339-352
-
(2000)
J. Mol. Evol.
, vol.51
, pp. 339-352
-
-
van Herwerden, L.1
Blair, D.2
Agatsuma, T.3
-
97
-
-
0001911744
-
A paedomorphic origin of the oligomerous animals?
-
von Salvini-Plawen L. A paedomorphic origin of the oligomerous animals?. Zool. Scr. 11 (1982) 77-81
-
(1982)
Zool. Scr.
, vol.11
, pp. 77-81
-
-
von Salvini-Plawen, L.1
-
98
-
-
0034907535
-
Mitochondrial pseudogenes are pervasive and often insiduous in the snapping shrimp genus Alpheus
-
Williams S.T., and Knowlton N. Mitochondrial pseudogenes are pervasive and often insiduous in the snapping shrimp genus Alpheus. Mol. Biol. Evol. 18 (2001) 1484-1493
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 1484-1493
-
-
Williams, S.T.1
Knowlton, N.2
-
100
-
-
0027083319
-
Animal mitochondrial DNA: structure and evolution
-
Wolstenholme D.R. Animal mitochondrial DNA: structure and evolution. Int. Rev. Cytol. 141 (1992) 173-216
-
(1992)
Int. Rev. Cytol.
, vol.141
, pp. 173-216
-
-
Wolstenholme, D.R.1
-
102
-
-
0001284561
-
Phylogeny of the Metazoa based on morphological and 18S ribosomal DNA evidence
-
Zrzavy J., Mihulka S., Kepka P., Bezdek A., and Tietz D. Phylogeny of the Metazoa based on morphological and 18S ribosomal DNA evidence. Cladistics 14 (1998) 249-285
-
(1998)
Cladistics
, vol.14
, pp. 249-285
-
-
Zrzavy, J.1
Mihulka, S.2
Kepka, P.3
Bezdek, A.4
Tietz, D.5
|