An advanced strategy for Brassica genome sequencing using comparative genomics with Arabidopsis

Acta Horticulturae

Volumn 706, Issue , 2006, Pages 73-76

  Yang, Tae Jin ^a   Kim, JungSun ^a   Lim, Ki Byung ^a   Kwon, Soo Jin ^a   Kim, Jin A ^a   Jin, Mina ^a   Park, Jee Young ^a   Lim, Myung Ho ^a   Jin, Yong Moon ^a   Kim, Ho Il ^a   Hahn, Jang Ho ^a   Lim, Yong Pyo ^b   Park, Beom Seok ^a  

^a National Institute of Animal Science   (South Korea)

^b Chungnam National University   (South Korea)

Author keywords

BAC end sequence; CentBr; Homeologous chromosome; In silico; Pericentromeric heterochromatin; Retrotransposon

Indexed keywords

ARABIDOPSIS; BRASSICA;

EID: 33745100804     PISSN: 05677572     EISSN: None     Source Type: Book Series    
DOI: 10.17660/ActaHortic.2006.706.6     Document Type: Conference Paper

References (9)

1. Acarkan, A., Rossberg, M., Koch, M. and Schmidt, R. 2000. Comparative genome analysis reveals extensive conservation of genome organisation for Arabidopsis thaliana and Capsella rubella. Plant J. 23:55-62.
2. Arabidopsis Genome Initiative. 2000. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408:796-815.
3. Bowers, J.E., Chapman, A.B., Rong, J. and Paterson, A.H. 2003. Unraveling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events. Nature 422:433-438.
4. Eckardt, N.A. 2001. Everything in its place: Conservation of gene order among distantly related plant species. Plant Cell 13:723-725.
5. Harrison, G.E. and Heslop-Harrison, J.S. 1995. Centromeric repetitive DNA sequences in the genus Brassica. Theor. Appl. Genet. 90:157-165.
6. Lim, K.B., de Jong, H., Yang, T.J., Park, J.Y., Kwon, S.J., Kim, J.S., Lim, M.H., Kim, J.A., Jin, M., Jin, Y.M., Kim, S.H., Lim, Y.P., Bang, J.W., Kim, H.I. and Park, B.S. 2005. Characterization of rDNAs and tandem repeats in heterochromatin of Brassica rapa. Mol & Cell 19:436-444.
7. O'Neill, C.M. and Bancroft, I. 2000. Comparative physical mapping of the segments of the genome of Brassica oleracea var. alboglabra that are homologous to sequenced regions of chromosomes 4 and 5 of Arabidopsis thaliana. Plant J. 23:233-243.
8. Schmidt, R., Acarkan, A. and Boivin, K. 2001. Comparative structural genomics in the Brassicaceae family. Plant Phys. Biochem. 39:253-262.
9. U. N. 1935 Genome analysis in Brassica with special reference to the experimental formation of B. napus and peculiar mode of fertilization. Japanese J. Bot. 7:389-452.