Isolation and characterization of a lipid transfer protein expressed in ripening fruit of Capsicum chinense

Planta

Volumn 223, Issue 4, 2006, Pages 672-683

  Liu, Kede ^a   Jiang, Hui ^b   Moore, Shanna L ^b   Watkins, Christopher B ^b   Jahn, Molly M ^b  

^a HUAZHONG AGRICULTURAL UNIVERSITY   (China)

^b Department of Obstetrics Gynecology   (United States)

Author keywords

Alternative splicing; C. chinense; CcLTP; Lipid transfer protein; Ripening; Species specific

Indexed keywords

CARRIER PROTEIN; LIPID TRANSFER PROTEINS, PLANT; PLANT ANTIGEN; VEGETABLE PROTEIN;

ALTERNATIVE RNA SPLICING; AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; FRUIT; GENE EXPRESSION REGULATION; GENE LIBRARY; GENETICS; METABOLISM; MOLECULAR CLONING; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PEPPER; PROMOTER REGION; REGULATORY SEQUENCE; SEEDLING;

ALTERNATIVE SPLICING; AMINO ACID SEQUENCE; ANTIGENS, PLANT; BASE SEQUENCE; CAPSICUM; CARRIER PROTEINS; CLONING, MOLECULAR; FRUIT; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENE EXPRESSION REGULATION, PLANT; GENE LIBRARY; MOLECULAR SEQUENCE DATA; PLANT PROTEINS; PROMOTER REGIONS (GENETICS); REGULATORY ELEMENTS, TRANSCRIPTIONAL; SEEDLING;

CAPSICUM; CAPSICUM ANNUUM; CAPSICUM CHINENSE; CAPSICUM FRUTESCENS;

EID: 33744965906     PISSN: 00320935     EISSN: 14322048     Source Type: Journal    
DOI: 10.1007/s00425-005-0120-0     Document Type: Article

References (72)

1. Abe H, Urao T, Ito T, Seki M, Shinozaki K, Yamaguchi-Shinozaki K (2003) Arabidopsis AtMYC2 (bHLH) and AtMYB2 (MYB) function as transcriptional activators in abscisic acid signaling. Plant Cell 15:63-78
2. Allenbach L, Poirier Y (2000) Analysis of the alternative pathways for the beta-oxidation of unsaturated fatty acids using transgenic plants synthesizing polyhydroxyalkanoates in peroxisomes. Plant Physiol 124:1159-1168
3. Arondel V, Vergnolle C, Cantrel C, Kader JC (2000) Lipid transfer proteins are encoded by a small multigene family in Arabidopsis thaliana. Plant Sci 157:1-12
4. Beisson F, Koo AJK, Ruuska S, Schwender J, Pollard M, Thelen JJ, Paddock T, Salas JJ, Savage L, Milcamps A, Mhaske VB, Cho YH, Ohlrogge JB (2003) Arabidopsis genes involved in acyl lipid metabolism A 2003 census of the candidates, a study of the distribution of expressed sequence tags in organs, and a Web-based database. Plant Physiol 132:681-697
5. Bernhard WR, Thoma S, Botella J, Somerville CR (1991) Isolation of a cDNA clone for spinach lipid transfer protein and evidence that the protein is synthesized by the secretory pathway. Plant Physiol 95:164-170
6. Brown JWS, Simpson CG, Thow G, Clark GP, Jennings SN, Medina-Escobar N, Haupt S, Chapman SC, Oparka KJ (2002) Splicing signals and factors in plant intron removal. Biochem Soc Trans 30:146-149
7. Curry J, Aluru M, Mendoza M, Nevarez J, O'Connell MA (1999) Transcripts for possible capsaicinoid biosynthetic genes are differentially accumulated in pungent and non-pungent Capsicum ssp. Plant Sci 148:47-57
8. Diatchenko L, Lau YF, Campbell AP, Chenchik A, Moqadam F, Huang B, Lukyanov S, Lukyanov K, Gurskaya N, Sverdlov ED, Siebert PD (1996) Suppression subtractive hybridization: a method for generating differentially regulated or tissue-specific cDNA probes and libraries. Proc Natl Acad Sci USA 93:6025-6030
9. Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure for small quantites of fresh leaf tissue. Phytochem Bull 19:11-15
10. Dubouzet JG, Sakuma Y, Ito Y, Kasuga M, Dubouzet EG, Miura S, Seki M, Shinozaki K, Yamaguchi-Shinozaki K (2003) OsDREB genes in rice, Oryza sativa L., encode transcription activators that function in drought-, high-salt- and cold-responsive gene expression. Plant J 33:751-763
11. Eklund DM, Edqvist J (2003) Localization of nonspecific lipid transfer proteins correlate with programmed cell death responses during endosperm degradation in Euphorbia lagascae seedlings. Plant Physiol 132:1249-1259
12. Feng JX, Ji SJ, Shi YH, Xu Y, Wei G, Zhu YX (2004) Analysis of five differentially expressed gene families in fast elongating cotton fiber. Acta Biochem Biophys Sin 36:51-56
13. Fils-Lycaon BR, Wiersma PA, Eastwell KC, Sautiere P (1996) A cherry protein and its gene, abundantly expressed in ripening fruit, have been identified as thaumatin-like. Plant Physiol 111:269-273
14. Garcia-Garrido JM, Menossi M, Puigdomenech P, Martinez-Izquierdo JA, Delseny M (1998) Characterization of a gene encoding an abscisic acid-inducible type-2 lipid transfer protein from rice . FEBS Lett 440:249-249
15. Gaudet DA, Laroche A, Frick M, Huel R, Puchalski B (2003) Cold induced expression of plant defensin and lipid transfer protein transcripts in winter wheat. Physiol Plant 117: 195-205
16. Giovannoni J (2001) Molecular biology of fruit maturation and ripening. Annu Rev Plant Physiol Plant Mol Biol 52:725-749
17. Gomar J, Petit MC, Sodano P, Sy D, Marion D, Kader JC, Vovelle F, Ptak M (1996) Solution structure and lipid binding of a nonspecific lipid transfer protein extracted from maize seeds. Protein Sci 5:565-577
18. Gomar J, Sodano P, Sy D, Shin D H, Lee J Y, Suh S W, Marion D, Vovelle F, Ptak M (1998) Comparison of solution and crystal structures of maize nonspecific lipid transfer protein: a model for a potential in vivo lipid carrier protein. Prot-Struct Func Bioinform 31:160-171
19. Green PJ, Kay SA, Chua NH (1987) Sequence-specific interactions of a pea nuclear factor with light-responsive elements upstream of the Rbcs-3a gene. EMBO J 6:2543-2549
20. Grosbois M, Guerbette F, Kader JC (1989) Changes in level and activity of phospholipid transfer protein during maturation and germination of maize seeds. Plant Physiol 90:1560-1564
21. Han GW, Lee JY, Song HK, Chang CS, Min K, Moon J, Shin DH, Kopka ML, Sawaya MR, Yuan HS, Kim TD, Choe J, Lim D, Moon HJ, Suh SW (2001) Structural basis of non-specific lipid binding in maize lipid-transfer protein complexes revealed by high-resolution X-ray crystallography. J Mol Biol 308:263-278
22. Higo K, Ugawa Y, Iwamoto M, Korenaga T (1999) Plant cis-acting regulatory DNA elements (PLACE) database: 1999. Nucleic Acids Res 27:297-300
23. Horvath BM, Bachem CWB, Trindade LM, Oortwijn MEP, Visser RGF (2002) Expression analysis of a family of nsLTP genes tissue specifically expressed throughout the plant and during potato tuber life cycle. Plant Physiol 129:1494-1506
24. Iusem ND, Bartholomew DM, Hitz WD, Scolnik PA (1993) Tomato (Lycopersicon esculentum) transcript induced by water deficit and ripening. Plant Physiol 102:1353-1354
25. Jung HW, Kim W, Hwang BK (2003) Three pathogen-inducible genes encoding lipid transfer protein from pepper are differentially activated by pathogens, abiotic, and environmental stresses. Plant Cell Environ 26:915-928
26. Jung HW, Hwang BK. (2000) Isolation, partial sequencing, and expression of pathogenesis-related cDNA genes from pepper leaves infected by Xanthomonas campestris pv vesicatoria. Molecular Plant-Microbe Interactions 13: 136-142
27. Kader JC (1996) Lipid-transfer proteins in plants. Annu Rev Plant Physiol Plant Mol Biol 47:627-654
28. Kader JC, Julienne M, Vergnolle C (1984) Purification and characterization of a spinach-leaf protein capable of transferring phospholipids from liposomes to mitochondria or chloroplasts. Eur J Biochem 139:411-416
29. Kalifa Y, Gilad A, Konrad Z, Zaccai M, Scolnik PA, Bar-Zvi D (2004) The water- and salt-stress-regulated Asr1 (abscisic acid stress ripening) gene encodes a zinc-dependent DNA-binding protein. Biochem J 381:373-378
30. Kazan K (2003) Alternative splicing and proteome diversity in plants: the tip of the iceberg has just emerged. Trends Plant Sci 8:468-471
31. Kristensen AK, Brunstedt J, Nielsen KK, Roepstorff P, Mikkelsen JD (2000) Characterization of a new antifungal non-specific lipid transfer protein (nsLTP) from sugar beet leaves. Plant Sci 155:31-40
32. Lam E, Chua NH (1989) Asf-2 - a factor that binds to the cauliflower mosaic virus-35 s promoter and a conserved gata motif in Cab promoters. Plant Cell 1:1147-1156
33. Lerche MH, Poulsen FH (1998) Solution structure of barley lipid transfer protein complexed with palmitate Two different binding modes of palmitate in the homologous maize and barley nonspecific lipid transfer proteins. Protein Sci 7:2490-2498
34. Liu K, Kang BK, Jiang H, Moore SL, Li H, Watkins CB, Setter TL, Jahn MM (2005) AGH3-llike gene, CcGH3, isolated from Capsicum chinense L fruit is regulated by auxin and ethylene. Plant Mol Biol 58:447-464
35. Ma DP, Liu HC, Tan HP, Creech RG, Jenkins JN, Chang YF (1997) Cloning and characterization of a cotton lipid transfer protein gene specifically expressed in fiber cells. Biochim Biophys Acta-Lipids Lipid Metabol 1344:111-114
36. Maldonado AM, Doerner P, Dixon RA, Lamb CJ, Cameron RK (2002) A putative lipid transfer protein involved in systemic resistance signalling in Arabidopsis. Nature 419: 399-403
37. Masumura T, Hibino T, Kidzu K, Mitsukawa N, Tanaka K, Fujii S (1990) Cloning and characterization of a cDNA encoding a rice 13 kDa prolamin. Mol Gen Genet 221:1-7
38. Miyazaki T, Morimoto T, Fukuyama K, Matsubara H (1994) Crystallization and preliminary X-ray diffraction studies of the alpha-amylase inhibitor coded 0.19 from wheat kernel. J Biochem (Tokyo) 115:179-181
39. Molina A, Diaz I, Vasil I K, Carbonero P, Garcia-Olmedo F (1996) Two cold inducible genes encoding lipid transfer protein LTP4 from barley show differential responses to bacterial pathogens. Mol Gen Genet 252:162-168
40. Molina A, Garcia-Olmedo F (1997) Enhanced tolerance to bacterial pathogens caused by the transgenic expression of barley lipid transfer protein LTP2. Plant J 12:669-675
41. Molina A, Segura A, Garcia-Olmedo F (1993) Lipid transfer proteins (nsLTPs) from barley and maize leaves are potent inhibitors of bacterial and fungal plant-pathogens. FEBS Lett 316:119-122
42. Moore S, Vrebalov J, Payton P, Giovannoni J (2002) Use of genomics tools to isolate key ripening genes and analyse fruit maturation in tomato. J Exp Bot 53: 2023-2030
43. Neta-Sharir I, Isaacson T, Lurie S, Weiss D (2005) Dual role for tomato heat shock protein 21: protecting photosystem II from oxidative stress and promoting color changes during fruit maturation. Plant Cell 17:1829-1838
44. Nielsen H, Engelbrecht J, Brunak S, vonHeijne G (1997) Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Protein Eng 10:1-6
45. Oda Y, Matsunaga T, Fukuyama K, Miyazaki T, Morimoto T (1997) Tertiary and quaternary structures of 0.19 alpha-amylase inhibitor from wheat kernel determined by X-ray analysis at 2.06 A resolution. Biochemistry 36:13503-13511
46. Orford SJ, Timmis JN (2000) Expression of a lipid transfer protein gene family during cotton fibre development. Biochim Biophys Acta-Mol Cell Biol Lipids 1483:275-284
47. Ouvrard O, Cellier F, Ferrare K, Tousch D, Lamaze T, Dupuis JM, Casse-Delbart F (1996) Identification and expression of water stress- and abscisic acid-regulated genes in a drought-tolerant sunflower genotype. Plant Mol Biol 31:819-829
48. Park CJ, Shin R, Park JM, Lee GJ, Youl JS, Paek KH (2002) Induction of pepper cDNA encoding a lipid transfer protein during the resistance response to tobacco mosaic virus. Plant Mol Biol 48:243-254
49. Pons JL, de Lamotte F, Gautier MF, Delsuc MA (2003) Refined solution structure of a liganded type 2 wheat nonspecific lipid transfer protein. J Biol Chem 278:14249-14256
50. Pyee J, Yu HS, Kolattukudy PE (1994) Identification of a lipid transfer protein as the major protein in the surface wax of broccoli (Brassica oleracea) leaves. Arch Biochem Biophys 311:460-468
51. Salcedo G, Diaz-Perales A, Sanchez-Monge R (1999) Fruit allergy: plant defence proteins as novel potential pan-allergens. Clin Exp Allergy 29:1158-1160
52. Segura A, Moreno M, Garcia-Olmedo F (1993) Purification and antipathogenic activity of lipid transfer proteins (LTPs) from the leaves of Arabidopsis and spinach. FEBS Lett 332:243-246
53. Shin DH, Lee JY, Hwang KY, Kim KK, Suh SW (1995) High-resolution crystal-structure of the nonspecific lipid-transfer protein from maize seedlings. Structure 3:189-199
54. Shyur LF, Wen TN, Chen CS (1992) cDNA cloning and gene expression of the major prolamins of rice. Plant Mol Biol 20:323-326
55. Stolowich NJ, Frolov A, Atshaves B, Murphy EJ, Jolly CA, Billheimer JT, Scott AI, Schroeder F (1997) The sterol carrier protein-2 fatty acid binding site: an NMR, circular dichroic, and fluorescence spectroscopic determination. Biochemistry 36:1719-1729
56. Takishima K, Watanabe S, Yamada M, Mamiya G (1986) The amino acid sequence of the nonspecific lipid transfer protein from germinated castor bean endosperms. Biochim Biophys Acta 870:248-255
57. Terras FRG, Goderis IJ, Vanleuven F, Vanderleyden J, Cammue BPA, Broekaert WF (1992) In vitro antifungal activity of a radish (Raphanus sativus L) seed protein homologous to non-specific lipid transfer proteins. Plant Physiol 100:1055-1058
58. Thoma S, Hecht U, Kippers A, Botella J, Devries S, Somerville C (1994) Tissue-specific expression of a gene encoding a cell wall-localized lipid transfer protein from Arabidopsis. Plant Physiol 105:35-45
59. Thoma S, Kaneko Y, Somerville C (1993) A nonspecific lipid transfer protein from Arabidopsis is a cell-wall protein. Plant J 3:427-436
60. Trevino MB, O'Connell MA (1998) Three drought-responsive members of the nonspecific lipid-transfer protein gene family in Lycopersicon pennellii show different developmental patterns of expression. Plant Physiol 116:1461-1468
61. Vignols F, Wigger M, Garcia-Garrido J M, Grellet F, Kader J C, Delseny M (1997) Rice lipid transfer protein (LTP) genes belong to a complex multigene family and are differentially regulated. Gene 195:177-186
62. Villain P, Clabault G, Mache R, Zhou DX (1994) S1f binding site is related to but different from the light-responsive GT-1 binding-site and differentially represses the spinach rps1 promoter in transgenic tobacco. J Biol Chem 269:16626-16630
63. Villain P, Mache R, Zhou DX (1996) The mechanism of GT element-mediated cell type-specific transcriptional control. J Biol Chem 271:32593-32598
64. Wang X, Bunkers G J, Walters MR, Thoma RS (2001) Purification and characterization of three antifungal proteins from cheese-weed (Malva parviflora). Biochem Biophys Res Commun 282:1224-1228
65. Wen TN, Shyur LF, Su JC, Chen CS (1993) Nucleotide sequence of a rice (Oryza sativa) prolamin storage protein gene, RP6. Plant Physiol 101:1115-1116
66. Wijaya R, Neumann GM, Condron R, Hughes AB, Polya GM (2000) Defense proteins from seed of Cassia fistula include a lipid transfer protein homologue and a protease inhibitory plant defensin. Plant Sci 159:243-255
67. Wu GH, Robertson AJ, Liu XJ, Zheng P, Wilen RW, Nesbitt NT, Gusta LV (2004) A lipid transfer protein gene BG-14 is differentially regulated by abiotic stress, ABA, anisomycin, and sphingosine in bromegrass (Bromus inermis). J Plant Physiol 161:449-458
68. Wu Z, Burns JK (2003) Isolation and characterization of a cDNA encoding a lipid transfer protein expressed in 'Valencia' orange during abscission. J Exp Bot 54:1183-1191
69. Yanagisawa S, Schmidt RJ (1999) Diversity and similarity among recognition sequences of Dof transcription factors. Plant J 17:209-214
70. Yubero-Serrano EM, Moyano E, Medina-Escobar N, Munoz-Blanco J, Caballero JL (2003) Identification of a strawberry gene encoding a non-specific lipid transfer protein that responds to ABA, wounding and cold stress. J Exp Bot 54:1865-1877
71. Zhou DX (1999) Regulatory mechanism of plant gene transcription by GT-elements and GT-factors. Trends Plant Sci 4:210-214
72. Zhu YY, Machleder EM, Chenchik A, Li R, Siebert PD (2001) Reverse transcriptase template switching: a SMART approach for full-length cDNA library construction. Biotechniques 30:892-897