Characterization of a new densovirus infecting the German cockroach, Blattella germanica

Journal of General Virology

Volumn 87, Issue 6, 2006, Pages 1567-1575

  Mukha, D V ^a   Chumachenko, A G ^a   Dykstra, M J ^b   Kurtti, T J ^c   Schal, C ^b  

^a VAVILOV INSTITUTE OF GENERAL GENETICS   (Russian Federation)

^b NORTH CAROLINA STATE UNIVERSITY   (United States)

^c UNIVERSITY OF MINNESOTA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CAPSID PROTEIN; VIRUS DNA;

AMINO ACID SEQUENCE; ANIMAL CELL; ANIMAL TISSUE; ARTICLE; CELL LINE; CELL NUCLEUS; COCKROACH; CONTROLLED STUDY; CYTOPLASM; DENSOVIRUS; DNA STRAND; ELECTRON MICROSCOPY; GENE SEQUENCE; GENOME ANALYSIS; INVERTED TERMINAL REPEAT; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; POLYADENYLATION; PREDICTION; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN ANALYSIS; SEQUENCE ANALYSIS; SIGNAL TRANSDUCTION; VIRUS CHARACTERIZATION; VIRUS GENOME; VIRUS ISOLATION; VIRUS PARTICLE; VIRUS PURIFICATION;

ANIMALS; BASE SEQUENCE; BLATTELLIDAE; CELL LINE; CLONING, MOLECULAR; DENSOVIRUS; DNA, VIRAL; GENOME, VIRAL; MICROSCOPY, ELECTRON; MOLECULAR SEQUENCE DATA; OPEN READING FRAMES; PHYLOGENY; SEQUENCE ANALYSIS, DNA; VIRAL PROTEINS;

BLATTARIA; BLATTELLA GERMANICA; DENSOVIRINAE; DENSOVIRUS; DNA VIRUSES; MIRIDAE; PARVOVIRIDAE;

EID: 33744812699     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/vir.0.81638-0     Document Type: Article

References (51)

1. Afanasiev, B. & Carlson, J. (2000). Densovirinae as gene transfer vehicles. Contrib Microbiol 4, 33-58.
2. Afanasiev, B. N., Galyov, E. E., Buchatsky, L. P. & Kozlov, Y. V. (1991). Nucleotide sequence and genomic organization of Aedes densonucleosis virus. Virology 185, 323-336.
3. Altschul, S. F., Gish, W., Miller, W., Myers, E. W. & Lipman, D. J. (1990). Basic local alignment search tool. J Mol Biol 215, 403-410.
4. Altschul, S. F., Madden, T. L, Schäffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
5. Altukhov, Y. P. (2003). Genetic Processes in Populations, 3rd edn, p. 431. Moscow: Academkniga.
6. Bando, H., Choi, H., Ito, Y. & Kawase, S. (1990). Terminal structure of a densovirus implies a hairpin transfer replication which is similar to the model for AAV. Virology 179, 57-63.
7. Bergoin, M. & Tijssen, P. (2000). Molecular biology of Densovirinae. Contrib Microbiol 4, 12-32.
8. Bloom, M. E., Alexandersen, S., Perryman, S., Lechner, D. & Wolfinbarger, J. B. (1988). Nucleotide sequence and genomic organization of Aleutian mink disease parvovirus (ADV): sequence comparisons between a nonpathogenic and a pathogenic strain of ADV. J Virol 62, 2903-2915.
9. Bossin, H., Fournier, P., Royer, C., Barry, P., Cérutti, P., Gimenez, S., Couble, P. & Bergoin, M. (2003). Junonia coenia densovirus-based vectors for stable transgene expression in Sf9 cells: influence of the densovirus sequences on genomic integration. J Virol 77, 11060-11071.
10. Bucher, P. (1990). Weight matrix descriptions of four eukaryotic RNA polymerase II promoter elements derived from 502 unrelated promoter sequences. J Mol Biol 212, 563-578.
11. Bucher, P. & Trifonov, E. N. (1986). Compilation and analysis of eukaryotic POL II promoter sequences. Nucleic Acids Res 14, 10009-10026.
12. Carlson, J., Afanasiev, B. & Suchman, E. (2000). Densonucleosis virus as transducing vectors for insects. In Insect Transgenesis: Methods and Applications, pp. 139-159. Edited by A. M. Handler & A. A. James. New York: CRC Press.
13. Chao, Y. C., Young, S. Y., III & Kim, K. S. (1984). Cytopathology of the soybean looper, Pseudoplusia includens, infected with the Pseudoplusia includens icosahedral virus. J Invertebr Pathol 45, 16-23.
14. Chao, Y. C., Young, S. Y., III, Kim, K. S. & Scott, H. A. (1985). A newly isolated densonucleosis virus from Pseudoplusia includens (Lepidoptera: Noctuidae). J Invertebr Pathol 46, 70-82.
15. Corsini, J., Afanasiev, B., Maxwell, I. H. & Carlson, J. O. (1996). Autonomous parvovirus and densovirus gene vectors. Adv Virus Res 47, 303-351.
16. Deiss, V., Tratschin, J.-D., Weitz, M. & Siegl, G. (1990). Cloning of the human parvovirus B19 genome and structural analysis of its palindromic termini. Virology 175, 247-254.
17. Dumas, B., Jourdan, M., Pascaud, A.-M. & Bergoin, M. (1992). Complete nucleotide sequence of the cloned infectious genome of Junonia coenia densovirus reveals an organization unique among parvoviruses. Virology 191, 202-222.
18. Dykstra, M. J. & Reuss, L. E. (2003). Biological Electron Microscopy: Theory, Techniques, and Troubleshootin, 2nd edn. New York: Springer.
19. Fédière, G. (2000). Epidemiology and pathology of Densovirinae. Contrib Microbiol 4, 1-11.
20. Fédière, G., EI-Far, M., Li, Y., Bergoin, M. & Tijssen, P. (2004). Expression strategy of densonucleosis virus from Mythimna loreyi. Virology 320, 181-189.
21. Garzon, S. & Kurstak, E. (1976). Ultrastructural studies on the morphogenesis of the densonucleosis virus (parvovirus). Virology 70, 517-531.
22. Gross, O., Tijssen, P., Weinberg, D. & Tal, J. (1990). Expression of densonucleosis virus GmDNV in Galleria mellonella larvae: size analysis and in vitro translation of viral transcription products. J Invertebr Pathol 56, 175-180.
23. Hu, Y., Zheng, J., Iizuka, T. & Bando, H. (1994). A densovirus newly isolated from the smoky-brown cockroach Periplaneta fuliginosa. Arch Virol 138, 365-372.
24. Kopanic, R. J., Jr, Holbrook, G. L., Sevala, V. & Schal, C. (2001). An adaptive benefit of facultative coprophagy in the German cockroach Blattella germanica. Ecol Entomol 26, 154-162.
25. Kurtti, T. J. & Brooks, M. A. (1977). Isolation of cell lines from embryos of the cockroach, Blattella germanica. In Vitro 13, 11-17.
26. Kurtti, T. J., Simser, J. A., Baldridge, G. D., Palmer, A. T. & Munderloh, U. G. (2005). Factors influencing in vitro infectivity and growth of Rickettsia peacockii (Rickettsiales: Rickettsiaceae), an endosymbiont of the Rocky Mountain wood tick, Dermacentor andersoni (Acari, Ixodidae). J Invertebr Pathol 90, 177-186.
27. Landureau, J.-C. & Jollés, P. (1969). Etude des exigences d'une lignè de cellules d'insectes (souches) EPa. I. Acides amines. Exp Cell Res 54, 391-398 (in French).
28. Meynadier, G., Matz, G., Veyrunes, J.-C. & Bras, N. (1977). Virose de type densonucleose chez les orthopteres. Ann Soc Entomol Fr (N S) 13, 487-493 (in French).
29. Mukha, D. V., Sidorenko, A. P., Lazebnaya, I. V. & Zakharov, I. A. (1995). Structural variation of the ribosomal gene cluster in the class Insecta. Genetika 31, 1249-1253 (in Russian).
30. Munderloh, U. G. & Kurtti, T. J. (1989). Formulation of medium for tick cell culture. Exp Appl Acarol 7, 219-229.
31. Poland, D. (1974). Recursion relation generation of probability profiles for specific-sequence macromolecules with long-range correlations. Biopolymers 13, 1859-1871.
32. Reese, M. G. (2001). Application of a time-delay neural network to promoter annotation in the Drosophila melanogaster genome. Comput Chem 26, 51-56.
33. Rosenstreich, D. L., Eggleston, P., Kattan, M. & 8 other authors (1997). The role of cockroach allergy and exposure to cockroach allergen in causing morbidity among inner-city children with asthma. N Engl J Med 336, 1356-1363.
34. Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
35. Sanger, F., Nicklen, S. & Coulson, A. R. (1977). DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci U S A 74, 5463-5467.
36. Shade, R. O., Blundell, M. C., Cotmore, S. F., Tattersall, P. & Astell, C. R. (1986). Nucleotide sequence and genome organization of human parvovirus B19 isolated from the serum of a child during aplastic crisis. J Virol 58, 921-936.
37. Shike, H., Dhar, A. K., Burns, J. C., Shimizu, C., Jousset, F. X., Klimpel, K. R. & Bergoin, M. (2000). Infectious hypodermal and hematopoietic necrosis virus of shrimp is related to mosquito brevidensoviruses. Virology 277, 167-177.
38. Siegl, G. & Tratschin, J. D. (1987). Parvoviruses: agents of distinct pathogenic and molecular potential. FEMS Microbiol Lett 46, 433-450.
39. Smith, R. F., Wiese, B. A., Wojzynski, M. K., Davison, D. B. & Worley, K. C. (1996). BCM Search Launcher - an integrated interface to molecular biology data base search and analysis services available on the World Wide Web. Genome Res 6, 454-462.
40. Srivastava, A., Lusby, E. W. & Berns, K. I. (1983). Nucleotide sequence and organization of the adeno-associated virus 2 genome. J Virol 45, 555-564.
41. Steger, G. (1994). Thermal denaturation of double-stranded nucleic acids: prediction of temperatures critical for gradient gel electrophoresis and polymerase chain reaction. Nucleic Acids Res 22, 2760-2768.
42. Suto, C., Kawamoto, F. & Kumada, N. (1979). A new virus isolated from the cockroach, Periplaneta fuliginosa (Serville). Microbiol Immunol 23, 207-211.
43. Tanada, Y. & Kaya, H. K. (1993). Insect Pathology. New York: Academic Press.
44. Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). clustal w: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
45. Tijssen, P. & Bergoin, M. (1995). Densonucleosis viruses constitute an increasingly diversified subfamily among the parvoviruses. Semin Virol 6, 347-355.
46. Tijssen, P., Li, Y., El-Far, M., Szelei, J., Letarte, M. & Zádori, Z. (2003). Organization and expression strategy of the ambisense genome of densonucleosis virus of Galleria mellonella. J Virol 77, 10357-10365.
47. Vago, C., Duthoit, J. L. & Delahaye, F. (1966). Les lésions nucléaires de la "Virose à noyaux denses" du lépidoptère Galleria mellonella. Arch Virol 18, 344-349 (in French).
48. van Munster, M., Dullemans, A. M., Verbeek, M., van den Heuvel, J. F. J. M., Reinbold, C., Brault, V., Clérivet, A. & van der Wilk, F. (2003). A new virus infecting Myzus persicae has a genome organization similar to the species of the genus Densovirus. J Gen Virol 84, 165-172.
49. Wang, J., Zhang, J., Jiang, H., Liu, C., Yi, F. & Hu, Y. (2005). Nucleotide sequence and genomic organization of a newly isolated densovirus infecting Dendrolimus punctatus. J Gen Virol 86, 2169-2173.
50. Yamagishi, J., Hu, Y., Zheng, J. & Bando, H. (1999). Genome organization and mRNA structure of Periplaneta fuliginosa densovirus imply alternative splicing involvement in viral gene expression. Arch Virol 144, 2111-2124.
51. Zuker, M. & Stiegler, P. (1981). Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information. Nucleic Acids Res 9, 133-148.