메뉴 건너뛰기




Volumn 96, Issue 21, 2006, Pages

Force-dependent fragility in RNA hairpins

Author keywords

[No Author keywords available]

Indexed keywords

CHEMICAL BONDS; DATA REDUCTION; DISSOCIATION; ELECTRON TRANSITIONS; FORCE CONTROL; FREE ENERGY;

EID: 33744768052     PISSN: 00319007     EISSN: 10797114     Source Type: Journal    
DOI: 10.1103/PhysRevLett.96.218301     Document Type: Article
Times cited : (59)

References (24)
  • 7
    • 1542381278 scopus 로고    scopus 로고
    • Proceedings of the Les Houches Summer School, Session LXXV, edited by H. Flyvberg and F. Julicher (Springer-Verlag, Berlin
    • E. Evans and P. Williams, in Physics of Biomolecules and Cells, Proceedings of the Les Houches Summer School, Session LXXV, edited by, H. Flyvberg, and, F. Julicher, (Springer-Verlag, Berlin, 2002).
    • (2002) Physics of Biomolecules and Cells
    • Evans, E.1    Williams, P.2
  • 8
    • 0037286741 scopus 로고    scopus 로고
    • MENZAU 0076-6879 10.1016/S0076-6879(03)61009-8Pulling experiments were performed at 25°C in 100 mM Tris HCl, 8.1pH, 1 mM ethylenediamine tetraacetic acid with a small interference RNA hairpin that targets the mRNA of the CD4 receptor of the human immunodeficiency virus. For details, see
    • S.B. Smith, Y. Cui, and C. Bustamante, Methods Enzymol. MENZAU 0076-6879 361, 134 (2003). 10.1016/S0076-6879(03)61009-8
    • (2003) Methods Enzymol. , vol.361 , pp. 134
    • Smith, S.B.1    Cui, Y.2    Bustamante, C.3
  • 9
    • 24644450199 scopus 로고    scopus 로고
    • NATUAS 0028-0836 10.1038/nature04061
    • D. Collin, Nature (London) NATUAS 0028-0836 437, 231 (2005). 10.1038/nature04061
    • (2005) Nature (London) , vol.437 , pp. 231
    • Collin, D.1
  • 10
    • 17844397196 scopus 로고    scopus 로고
    • BIOJAU 0006-3495 10.1529/biophysj.104.045344
    • Experimentally the micropipette is moved at a constant pulling speed. However, above pN (where the molecule typically unfolds and refolds) the loading rate is approximately constant and equal to the stiffness of the trap times the pulling speed. For details, see M. Manosas and F. Ritort, Biophys. J. 88, 3224 (2005). BIOJAU 0006-3495 10.1529/biophysj.104.045344
    • (2005) Biophys. J. , vol.88 , pp. 3224
    • Manosas, M.1    Ritort, F.2
  • 11
    • 2342470819 scopus 로고    scopus 로고
    • EPJSFH 1292-8941 10.1140/epje/e2003-00019-8
    • S. Cocco, R. Monasson, and J.F. Marko, Eur. Phys. J. E 10, 153 (2003). EPJSFH 1292-8941 10.1140/epje/e2003-00019-8
    • (2003) Eur. Phys. J. E , vol.10 , pp. 153
    • Cocco, S.1    Monasson, R.2    Marko, J.F.3
  • 13
    • 37649027722 scopus 로고    scopus 로고
    • PLEEE8 1063-651X 10.1103/PhysRevE.65.031917
    • D.K. Lubensky and D.R. Nelson, Phys. Rev. E 65, 031917 (2002). PLEEE8 1063-651X 10.1103/PhysRevE.65.031917
    • (2002) Phys. Rev. E , vol.65 , pp. 031917
    • Lubensky, D.K.1    Nelson, D.R.2
  • 15
    • 0000288714 scopus 로고
    • SCIEAS 0036-8075
    • The fragility μ is directly related to the parameter α (μ=2α-1) introduced in J.E. Leffler, Science SCIEAS 0036-8075 117, 340 (1953) to characterize the resemblance of the transition state to the reactant and product of a chemical reaction.
    • (1953) Science , vol.117 , pp. 340
    • Leffler, J.E.1
  • 16
  • 17
    • 16344371778 scopus 로고    scopus 로고
    • BICHAW 0144-0578 10.1021/bi047314+k0 is not the real attempt frequency of the RNA molecule but has contributions from the setup (handles and bead). Yet these can be shown that do not to change the order of magnitude of its value
    • D. Thirumalai and C. Hyeon, Biochemistry BICHAW 0144-0578 44, 4957 (2005). 10.1021/bi047314+
    • (2005) Biochemistry , vol.44 , pp. 4957
    • Thirumalai, D.1    Hyeon, C.2
  • 19
    • 33646131832 scopus 로고    scopus 로고
    • BIOJAU 0006-3495
    • P.T.X. Li, Biophys. J. 90, 250 (2006). BIOJAU 0006-3495
    • (2006) Biophys. J. , vol.90 , pp. 250
    • Li, P.T.X.1
  • 21
    • 33646203784 scopus 로고    scopus 로고
    • BIOJAU 0006-3495 10.159/biophysj.105.078030
    • C. Hyeon D. Thirumalai Biophys. J. 90, 3410 (2006). BIOJAU 0006-3495 10.159/biophysj.105.078030
    • (2006) Biophys. J. , vol.90 , pp. 3410
    • Hyeon, C.1    Thirumalai, D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.