Molecular and pathotype analysis of the rice blast fungus in North Vietnam

European Journal of Plant Pathology

Volumn 114, Issue 4, 2006, Pages 381-396

  Thuan, Nguyen Thi Ninh ^a,b   Bigirimana, Joseph ^a,b   Roumen, Ed ^c   Van Der Straeten, Dominique ^a   Höfte, Monica ^a,b  

^a GHENT UNIVERSITY   (Belgium)

^b Institute for Plant Biotechnology for Developing Countries (IPBO)   (Belgium)

^c Bayer Cropscience Belgium   (Belgium)

Author keywords

AFLP; Genetic diversity; Magnaporthe grisea; Pyricularia grisea

Indexed keywords

CLONAL GROWTH; CLUSTER ANALYSIS; FUNGAL DISEASE; GENE FLOW; GENETIC VARIATION; GENOTYPE; MOLECULAR ANALYSIS; PATHOGENICITY; PATHOTYPE; POLYMORPHISM; RICE;

ASIA; EURASIA; RED RIVER DELTA; SOUTHEAST ASIA; VIET NAM;

FUNGI; JAPONICA; MAGNAPORTHE GRISEA;

EID: 33744529356     PISSN: 09291873     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10658-006-0002-8     Document Type: Article

References (29)

1. JC Bhatt RA Singh 1992 Blast of rice US Singh AN Mukhopadhyay J Kumar HS Chaube Plant Diseases of International Importance Printice Hall New Jersey, USA 80 115 Vol. I
2. AHD Brown MW Fieldman E Nevo 1980 Multilocus structure of natural populations of Hordeum spontaneum Genetics 96 523 536
3. GT Bryan K-S Wu L Farrall Y Jia HP Hershey SA [tmp] McAdams KN Faulk GK Donaldson R Tarchini B Valent 2000 A single amino acid difference distinguishes resistant and susceptible alleles of the rice blast resistance gene Pi-ta The Plant Cell 12 2033 2045
4. HL Chen BT Chen DP Zhang YF Xie Q Zhang 2001 Pathotypes of Pyricularia grisea in rice fields of central and southern China Plant Disease 85 843 850
5. FJ Correa-Victoria RS Zeigler 1993 Pathogenic variability in Pyricularia grisea at a rice blast "hot spot" breeding site in eastern Colombia Plant Disease 77 1029 1035
6. FJ Correa-Victoria RS Zeigler 1995 Stability of partial and complete resistance in rice to Pyricularia grisea under rainfed upland conditions in eastern Colombia Phytopathology 85 977 982
7. BC Couch LM Kohn 2002 A multilocus gene genealogy concordant with host preference indicates segregation of a new species, Magnaporthe oryzae, from M. grisea Mycologia 94 683 693
8. LD Don Y Tosa H Nakayashiki S Mayama 1999a Population structure of the rice blast pathogen in Vietnam Annals of the Phytopathological Society of Japan 65 475 479
9. LD Don M Kusaba AS Urashima Y Tosa H Nakayashiki S Mayama 1999b Population structure of the rice blast fungus in Japan examined by DNA fingerprinting Annals of the Phytopathological Society of Japan 65 15 24
10. MLC George RJ Nelson RS Zeigler H Leung 1998 Rapid population analysis of Magnaporthe grisea by using rep-PCR and endogenous repetitive DNA sequences Phytopathology 88 223 229
11. J Kumar RJ Nelson RS Zeigler 1999 Population structure and dynamics of Magnaporthe grisea in the Indian Himalayas Genetics 152 971 984
12. M Javan-Nikkhah BA [tmp] McDonald S Banke G Hedjaroude 2004 Genetic structure of Iranian Pyricularia grisea populations based on rep-PCR fingerprinting European Journal of Plant Pathology 110 909 919
13. M Levy J Romano MA Marchetti JE Hamer 1991 DNA fingerprinting with a dispersed repeated sequence resolves pathotype diversity in the rice blast fungus The Plant Cell 3 95 102
14. P Mekwatanakarn W Kositratana M Levy RS Zeigler 2000 Pathotype and avirulence gene diversity of Pyricularia grisea in Thailand as determined by rice lines near-isogenic for major resistance genes Plant Disease 84 60 70
15. UG Mueller L Wolfenbarger 1999 AFLP genotyping and fingerprinting Trends in Ecology & Evolution 14 389 394
16. MG Murray WF Thompson 1980 Rapid isolation of high molecular weight plant DNA Nucleic Acids Research 19 4321 4325
17. M Nei 1987 Molecular Evolutionary Genetics. Columbia University Press New York
18. Ninh Thuan N, Trinh Toan N, Kim Dung TN, Quang VD, Breyne P, Van Montagu M (2000) Identification of markers linked to blast resistance genes in Vietnamese rice cultivars using bulked segregant - AFLP. In: The Plant and Animal Genome VIII (p. 97) San Diego, CA, USA
19. T Noda N Hayashi PV Du HD Dinh LV E 1999 Distribution of pathogenic races of rice blast fungus in Vietnam Annales of the Phytopathological Society of Japan 65 526 530
20. SH Ou 1985 Rice Diseases 2 Commonwealth Mycological Institute Kew, UK
21. Pham DQ, Le QT, Nguyen DT and Vu TL (2004) Vietnam Rice Directory 2000-2001. Agricultural Publication House, Hanoi, Vietnam. (in Vietnamese)
22. E Roumen M Levy JL Notteghem 1997 Characterisation of the European pathogen population of Magnaporthe grisea by DNA fingerprinting and pathotype analysis European Journal of Plant Pathology 103 363 371
23. C Sallaud M Lorieux E Roumen D Tharreau R Berruyer P Svestasrani O Garsmeur A Ghesquiere JL Notteghem 2003 Identification of five new blast resistance genes in highly blast resistant rice variety 'IR64' using QTL mapping strategy Theoretical and Applied Genetics 106 794 803
24. Thinlay RS Zeigler MR Finckh 2000 Pathogenic variability of Pyricularia grisea from the high- and mid-elevation zones of Bhutan Phytopathology 90 621 628
25. B Valent MS Crawfort CG Weaver FG Chumley 1986 Genetic studies of fertility and pathogenicity in Magnaporthe grisea (Pyricularia grisea) Iowa State Journal of Research 60 569 594
26. Y Van de Peer R De Wachter 1994 TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment Computer Applications in the Biosciences 10 569 570
27. P Vos R Hogers M Bleeker M Reijans T Vanderlee M Hornes A Frijters J Pot J Peleman M Kuiper M Zabeau 1995 AFLP: New Technique for DNA-fingerprinting Nucleic Acids Research 23 4407 4414
28. JQ Xia JC Correll FN Lee WJ Ross DD Rhoads 2000 Regional population diversity of Pyricularia grisea in Arkansas and the influence of host selection Plant Disease 84 877 884
29. RS Zeigler 1998 Recombination in Magnaporthe grisea Annual Review of Phytopathology 36 249 275