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Volumn 94, Issue 2, 2006, Pages 330-336

Rapid specific detection and quantification of bacteria and archaea involved in mineral sulfide bioleaching using real-time PCR

Author keywords

16S rDNA; Detection and quantification; Leaching bacteria and archaea; Real time PCR

Indexed keywords

BACTERIOLOGY; BIOASSAY; DNA; LEACHING; REAL TIME SYSTEMS; SULFUR COMPOUNDS;

EID: 33744494021     PISSN: 00063592     EISSN: 10970290     Source Type: Journal    
DOI: 10.1002/bit.20845     Document Type: Article
Times cited : (45)

References (28)
  • 1
    • 0028946084 scopus 로고
    • Phylogenetic identification and in situ detection of individual microbial cells without cultivation
    • Amann RI, Ludwig W, Schleifer KH. 1995. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev 59:143-169.
    • (1995) Microbiol Rev , vol.59 , pp. 143-169
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.H.3
  • 2
    • 0028022846 scopus 로고
    • An immunological assay for detection and enumeration of thermophilic biomining microorganisms
    • Amaro AM, Hallberg KB, Lindstrom EB, Jerez CA. 1994. An immunological assay for detection and enumeration of thermophilic biomining microorganisms. Appl Environ Microbiol 60:3470-3473.
    • (1994) Appl Environ Microbiol , vol.60 , pp. 3470-3473
    • Amaro, A.M.1    Hallberg, K.B.2    Lindstrom, E.B.3    Jerez, C.A.4
  • 3
    • 0036008787 scopus 로고    scopus 로고
    • Enumeration of total bacteria and bacteria with genes for proteolytic activity in pure cultures and in environmental samples by quantitative PCR mediated amplification
    • Bach HJ, Tomanova J, Schloter M, Munch JC. 2002. Enumeration of total bacteria and bacteria with genes for proteolytic activity in pure cultures and in environmental samples by quantitative PCR mediated amplification. J Microbiol Methods 49:235-245.
    • (2002) J Microbiol Methods , vol.49 , pp. 235-245
    • Bach, H.J.1    Tomanova, J.2    Schloter, M.3    Munch, J.C.4
  • 4
    • 0020074601 scopus 로고
    • Determination of the number of respiring Thiobacillus ferrooxidans cells in water samples by using combined fluorescent antibody 2-(p-iodophenyl)-3-(p- nitrophenyl)-5-phenyltetretrazolium chloride staining
    • Baker KH, Mills AL. 1982. Determination of the number of respiring Thiobacillus ferrooxidans cells in water samples by using combined fluorescent antibody 2-(p-iodophenyl)-3-(p-nitrophenyl)-5-phenyltetretrazolium chloride staining. Appl Environ Microbiol 43:338-344.
    • (1982) Appl Environ Microbiol , vol.43 , pp. 338-344
    • Baker, K.H.1    Mills, A.L.2
  • 5
    • 0028343555 scopus 로고
    • Remarkable archaeal diversity detected in a Yellowstone National Park hot spring environment
    • Barns SM, Fundyga RE, Jeffries MW, Pace NR. 1994. Remarkable archaeal diversity detected in a Yellowstone National Park hot spring environment. Proc Natl Acad Sci USA 91:1609-1613.
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 1609-1613
    • Barns, S.M.1    Fundyga, R.E.2    Jeffries, M.W.3    Pace, N.R.4
  • 6
    • 84984087399 scopus 로고
    • The role of bacteria in copper mining operations
    • Beck JV. 1967. The role of bacteria in copper mining operations. Biotechnol Bioeng 9:133-139.
    • (1967) Biotechnol Bioeng , vol.9 , pp. 133-139
    • Beck, J.V.1
  • 7
    • 0034992824 scopus 로고    scopus 로고
    • Design and performance of rRNA targeted oligonucleotide probes for in situ detection and phylogenetic identification of microorganisms inhabiting acid mine drainage environments
    • Bond PL, Banfield JF. 2001. Design and performance of rRNA targeted oligonucleotide probes for in situ detection and phylogenetic identification of microorganisms inhabiting acid mine drainage environments. Microb Ecol 41:149-161.
    • (2001) Microb Ecol , vol.41 , pp. 149-161
    • Bond, P.L.1    Banfield, J.F.2
  • 8
    • 0030290368 scopus 로고    scopus 로고
    • Oxidation of mineral sulphides by thermophilic microorganisms
    • Clark DA, Norris PR. 1996. Oxidation of mineral sulphides by thermophilic microorganisms. Miner Eng 9:1119-1125.
    • (1996) Miner Eng , vol.9 , pp. 1119-1125
    • Clark, D.A.1    Norris, P.R.2
  • 10
    • 0030825250 scopus 로고    scopus 로고
    • PCR-mediated detection of acidophilic, bioleaching-associated bacteria
    • De Wulf-Durand P, Bryant LJ, Sly LI. 1997. PCR-mediated detection of acidophilic, bioleaching-associated bacteria. Appl Environ Microbiol 63:2944-2948.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 2944-2948
    • De Wulf-Durand, P.1    Bryant, L.J.2    Sly, L.I.3
  • 12
    • 0028205668 scopus 로고
    • Cultural and phylogentic analysis of mixed microbial populations found in natural and commercial bioleaching environments
    • Goebel BM, Stackebrandt E. 1994. Cultural and phylogentic analysis of mixed microbial populations found in natural and commercial bioleaching environments. Appl Environ Microbiol 60:1614-1621.
    • (1994) Appl Environ Microbiol , vol.60 , pp. 1614-1621
    • Goebel, B.M.1    Stackebrandt, E.2
  • 13
    • 0023268669 scopus 로고
    • Association of acid-producing Thiobacilli with degradation of concrete: Analysis by 'signature' fatty acids from polar lipids and lipopolysaccharide
    • Kerger BD, Nichols PD, Sand W, Bock E, White DC. 1987. Association of acid-producing Thiobacilli with degradation of concrete: Analysis by 'signature' fatty acids from polar lipids and lipopolysaccharide. J Ind Microbiol 2:63-69.
    • (1987) J Ind Microbiol , vol.2 , pp. 63-69
    • Kerger, B.D.1    Nichols, P.D.2    Sand, W.3    Bock, E.4    White, D.C.5
  • 14
    • 0347927365 scopus 로고    scopus 로고
    • The isolation and use of iron-oxidizing, moderately thermophilic acidophiles from the Collie coal mine for the generation of ferric iron leaching solution
    • Kinnunen PH, Robertson WJ, Plumb JJ, Gibson JA, Nichols PD, Franzmann PD, Puhakka JA. 2003. The isolation and use of iron-oxidizing, moderately thermophilic acidophiles from the Collie coal mine for the generation of ferric iron leaching solution. Appl Microbiol Biotechnol 60:748-753.
    • (2003) Appl Microbiol Biotechnol , vol.60 , pp. 748-753
    • Kinnunen, P.H.1    Robertson, W.J.2    Plumb, J.J.3    Gibson, J.A.4    Nichols, P.D.5    Franzmann, P.D.6    Puhakka, J.A.7
  • 15
    • 0023155010 scopus 로고
    • A combined immunofluorescence-DNA fluorescence staining technique for enumeration of Thiobacillus ferrooxidans in a population of acidophilic bacteria
    • Muyzer G, deBruin A, Schnedding D, Bos P, Westbroek P, Kuenen G. 1987. A combined immunofluorescence-DNA fluorescence staining technique for enumeration of Thiobacillus ferrooxidans in a population of acidophilic bacteria. Appl Environ Microbiol 53:660-664.
    • (1987) Appl Environ Microbiol , vol.53 , pp. 660-664
    • Muyzer, G.1    Debruin, A.2    Schnedding, D.3    Bos, P.4    Westbroek, P.5    Kuenen, G.6
  • 16
    • 0027201625 scopus 로고
    • Mineral sulfide oxidation by enrichment cultures of novel thermophilic bacteria
    • Norris PR, Owen JP. 1993. Mineral sulfide oxidation by enrichment cultures of novel thermophilic bacteria. FEMS Microbiol Revs 11:51-56.
    • (1993) FEMS Microbiol Revs , vol.11 , pp. 51-56
    • Norris, P.R.1    Owen, J.P.2
  • 18
    • 0033930093 scopus 로고    scopus 로고
    • Development and application of small-subunit rRNA probes for assessment of selected Thiobacillus species and members of the genus Acidiphilium
    • Peccia J, Marchand EA, Silverstein J, Hernandez M. 2000. Development and application of small-subunit rRNA probes for assessment of selected Thiobacillus species and members of the genus Acidiphilium. Appl Environ Microbiol 66:3065-3072.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 3065-3072
    • Peccia, J.1    Marchand, E.A.2    Silverstein, J.3    Hernandez, M.4
  • 19
    • 0030009730 scopus 로고    scopus 로고
    • Bacterial populations in samples of bioleached copper ore as revealed by analysis of DNA obtained before and after cultivation
    • Pizarro J, Jedlicki E, Orellana O, Romero J, Espejo RT. 1996. Bacterial populations in samples of bioleached copper ore as revealed by analysis of DNA obtained before and after cultivation. Appl Environ Microbiol 62:1323-1328.
    • (1996) Appl Environ Microbiol , vol.62 , pp. 1323-1328
    • Pizarro, J.1    Jedlicki, E.2    Orellana, O.3    Romero, J.4    Espejo, R.T.5
  • 21
    • 0032931552 scopus 로고    scopus 로고
    • Reasons why 'Leptospirillum'-like species rather than Thiobacillus ferrooxidans are the dominant iron-oxidizing bacteria in many commercial processes for the biooxidation of pyrite and related ores
    • Rawlings DE, Tributsch H, Hansford GS. 1999. Reasons why 'Leptospirillum'-like species rather than Thiobacillus ferrooxidans are the dominant iron-oxidizing bacteria in many commercial processes for the biooxidation of pyrite and related ores. Microbiology 145:5-13.
    • (1999) Microbiology , vol.145 , pp. 5-13
    • Rawlings, D.E.1    Tributsch, H.2    Hansford, G.S.3
  • 22
    • 25844446868 scopus 로고    scopus 로고
    • Kennecott's Bingham Canyon heap leach program, part 1: The test heap and SX-EW pilot plant
    • Copper hydrometallurgy forum, Brisbane, Australia
    • Ream BP, Schutt WJ. 1997. Kennecott's Bingham Canyon heap leach program, part 1: The test heap and SX-EW pilot plant. In: ALTA 1997, Copper hydrometallurgy forum, Brisbane, Australia.
    • (1997) ALTA 1997
    • Ream, B.P.1    Schutt, W.J.2
  • 25
    • 0043076342 scopus 로고    scopus 로고
    • Comparative leaching of chalcopyrite by selected acidophilic bacteria and archaea
    • Stott MB. Sutton DC, Watling HR, Franzmann PD. 2003. Comparative leaching of chalcopyrite by selected acidophilic bacteria and archaea. Geomicrobiol J 20:215-230.
    • (2003) Geomicrobiol J , vol.20 , pp. 215-230
    • Stott, M.B.1    Sutton, D.C.2    Watling, H.R.3    Franzmann, P.D.4
  • 26
    • 0035379677 scopus 로고    scopus 로고
    • Application of the 5′ fluorogenic exonuclease assay (TaqMan) for quantitative ribosomal DNA and rRNA analysis in sediments
    • Stults JR, Snoeyenbos-West O, Methe B, Lovley DR, Chandler DP. 2001. Application of the 5′ fluorogenic exonuclease assay (TaqMan) for quantitative ribosomal DNA and rRNA analysis in sediments. Appl Environ Microbiol 67:2781-2789.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 2781-2789
    • Stults, J.R.1    Snoeyenbos-West, O.2    Methe, B.3    Lovley, D.R.4    Chandler, D.P.5
  • 27
    • 0033766069 scopus 로고    scopus 로고
    • Rapid detection and quantification of members of the archaeal community by quantitative PCR using fluorogenic probes
    • Takai K, Horikoshi K. 2000. Rapid detection and quantification of members of the archaeal community by quantitative PCR using fluorogenic probes. Appl Environ Microbiol 66:5066-5072.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 5066-5072
    • Takai, K.1    Horikoshi, K.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.