-
1
-
-
0016345760
-
Chemical and biological evolution of nucleotide-binding protein
-
Rossmann MG, Moras D, Olsen KW (1974) Chemical and biological evolution of nucleotide-binding protein. Nature 250: 194-199.
-
(1974)
Nature
, vol.250
, pp. 194-199
-
-
Rossmann, M.G.1
Moras, D.2
Olsen, K.W.3
-
2
-
-
85021467943
-
Structure and function of haemoglobin: II. Some relations between polypeptide chain configuration and amino acid sequence
-
Perutz MF, Kendrew JC, Watson HC (1965) Structure and function of haemoglobin: II. Some relations between polypeptide chain configuration and amino acid sequence. J Mol Biol 13: 669-678.
-
(1965)
J Mol Biol
, vol.13
, pp. 669-678
-
-
Perutz, M.F.1
Kendrew, J.C.2
Watson, H.C.3
-
3
-
-
0022102222
-
Evolution of the proteases of blood coagulation and fibrinolysis by assembly from modules
-
Patthy L (1985) Evolution of the proteases of blood coagulation and fibrinolysis by assembly from modules. Cell 41: 657-663.
-
(1985)
Cell
, vol.41
, pp. 657-663
-
-
Patthy, L.1
-
4
-
-
0024149641
-
The immunoglobulin superfamily - Domains for cell-surface recognition
-
Williams AF, Barclay AN (1988) The immunoglobulin superfamily - Domains for cell-surface recognition. Annu Rev Immunol 6: 381-405.
-
(1988)
Annu Rev Immunol
, vol.6
, pp. 381-405
-
-
Williams, A.F.1
Barclay, A.N.2
-
5
-
-
0025900486
-
Shuffled domains in extracellular proteins
-
Bork P (1991) Shuffled domains in extracellular proteins. FEBS Lett 286: 47-54.
-
(1991)
FEBS Lett
, vol.286
, pp. 47-54
-
-
Bork, P.1
-
6
-
-
0027122748
-
Proteins - 1,000 Families for the molecular biologist
-
Chothia C (1992) Proteins - 1,000 families for the molecular biologist. Nature 357: 543-544.
-
(1992)
Nature
, vol.357
, pp. 543-544
-
-
Chothia, C.1
-
8
-
-
0041828241
-
Scaling laws in the functional content of genomes
-
van Nimwegen E (2003) Scaling laws in the functional content of genomes. Trends Genet 19: 479-484.
-
(2003)
Trends Genet
, vol.19
, pp. 479-484
-
-
Van Nimwegen, E.1
-
10
-
-
0032509179
-
Comparison of the complete protein sets of worm and yeast: Orthology and divergence
-
Chervitz SA, Aravind L, Sherlock G, Ball CA, Koonin EV, et al. (1998) Comparison of the complete protein sets of worm and yeast: Orthology and divergence. Science 282: 2022-2028.
-
(1998)
Science
, vol.282
, pp. 2022-2028
-
-
Chervitz, S.A.1
Aravind, L.2
Sherlock, G.3
Ball, C.A.4
Koonin, E.V.5
-
11
-
-
0032804892
-
Origin of multicellular eukaryotes - Insights from proteome comparisons
-
Aravind L, Subramanian G (1999) Origin of multicellular eukaryotes - Insights from proteome comparisons. Curr Opin Genet Dev 9: 688-694.
-
(1999)
Curr Opin Genet Dev
, vol.9
, pp. 688-694
-
-
Aravind, L.1
Subramanian, G.2
-
12
-
-
0034708444
-
Comparative genomics of the eukaryotes
-
Rubin GM, Yandell MD, Wortman JR, Gabor Miklos GL, Nelson CR, et al. (2000) Comparative genomics of the eukaryotes. Science 287: 2204-2215.
-
(2000)
Science
, vol.287
, pp. 2204-2215
-
-
Rubin, G.M.1
Yandell, M.D.2
Wortman, J.R.3
Gabor Miklos, G.L.4
Nelson, C.R.5
-
13
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, et al. (2001) Initial sequencing and analysis of the human genome. Nature 409: 860-921.
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
Lander, E.S.1
Linton, L.M.2
Birren, B.3
Nusbaum, C.4
Zody, M.C.5
-
14
-
-
33644876924
-
Ensembl 2006
-
Birney E, Andrews D, Caccamo M, Chen Y, Clarke L, et al. (2006) Ensembl 2006. Nucleic Acids Res 34: D556-D561.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Birney, E.1
Andrews, D.2
Caccamo, M.3
Chen, Y.4
Clarke, L.5
-
15
-
-
0347519175
-
The immunoglobulin superfamily in Drosophila melanogaster and Caenorhabditis elegans and the evolution of complexity
-
Vogel C, Teichmann SA, Chothia C (2003) The immunoglobulin superfamily in Drosophila melanogaster and Caenorhabditis elegans and the evolution of complexity. Development 130: 6317-6328.
-
(2003)
Development
, vol.130
, pp. 6317-6328
-
-
Vogel, C.1
Teichmann, S.A.2
Chothia, C.3
-
16
-
-
0028961335
-
SCOP: A structural classification of proteins database for the investigation of sequences and structures
-
Murzin AG, Brenner SE, Hubbard T, Chothia C (1995) SCOP: A structural classification of proteins database for the investigation of sequences and structures. J Mol Biol 247: 536-540.
-
(1995)
J Mol Biol
, vol.247
, pp. 536-540
-
-
Murzin, A.G.1
Brenner, S.E.2
Hubbard, T.3
Chothia, C.4
-
17
-
-
0035798406
-
Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure
-
Gough J, Karplus K, Hughey R, Chothia C (2001) Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure. J Mol Biol 313: 903-919.
-
(2001)
J Mol Biol
, vol.313
, pp. 903-919
-
-
Gough, J.1
Karplus, K.2
Hughey, R.3
Chothia, C.4
-
18
-
-
0347125294
-
The SUPERFAMILY database in 2004: Additions and improvements
-
Madera M, Vogel C, Kummerfeld SK, Chothia C, Gough J (2004) The SUPERFAMILY database in 2004: Additions and improvements. Nucleic Acids Res 32: D235-D239.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Madera, M.1
Vogel, C.2
Kummerfeld, S.K.3
Chothia, C.4
Gough, J.5
-
19
-
-
0842268045
-
Supradomains - Evolutionary units larger than single protein domains
-
Vogel C, Berzuini C, Bashton M, Gough J, Teichmann SA (2004) Supradomains - Evolutionary units larger than single protein domains. J Mol Biol 336: 809-823.
-
(2004)
J Mol Biol
, vol.336
, pp. 809-823
-
-
Vogel, C.1
Berzuini, C.2
Bashton, M.3
Gough, J.4
Teichmann, S.A.5
-
20
-
-
0042902833
-
The COG database: An updated version includes eukaryotes
-
Tatusov RL, Fedorova ND, Jackson JD, Jacobs AR, Kiryutin B, et al. (2003) The COG database: An updated version includes eukaryotes. BMC Bioinformatics 4: 41.
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 41
-
-
Tatusov, R.L.1
Fedorova, N.D.2
Jackson, J.D.3
Jacobs, A.R.4
Kiryutin, B.5
-
21
-
-
0346494941
-
SCOP database in 2004: Refinements integrate structure and sequence family data
-
Andreeva A, Howorth D, Brenner SE, Hubbard TJ, Chothia C, et al. (2004) SCOP database in 2004: Refinements integrate structure and sequence family data. Nucleic Acids Res 32: D226-D229.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Andreeva, A.1
Howorth, D.2
Brenner, S.E.3
Hubbard, T.J.4
Chothia, C.5
-
22
-
-
33644876020
-
Pfam: Clans, web tools and services
-
Finn RD, Mistry J, Schuster-Bockler B, Griffiths-Jones S, Hollich V, et al. (2006) Pfam: Clans, web tools and services. Nucleic Acids Res 34: D247-D251.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Finn, R.D.1
Mistry, J.2
Schuster-Bockler, B.3
Griffiths-Jones, S.4
Hollich, V.5
-
23
-
-
28044431588
-
Protein variety and functional diversity: Swiss-Prot annotation in its biological context
-
Boeckmann B, Blatter MC, Famiglietti L, Hinz U, Lane L, et al. (2005) Protein variety and functional diversity: Swiss-Prot annotation in its biological context. C R Biol 328: 882-899.
-
(2005)
C R Biol
, vol.328
, pp. 882-899
-
-
Boeckmann, B.1
Blatter, M.C.2
Famiglietti, L.3
Hinz, U.4
Lane, L.5
-
24
-
-
0034284603
-
Relation between population density and body size in stream communities
-
Schmid PE, Tokeshi M, Schmid-Araya JM (2000) Relation between population density and body size in stream communities. Science 289: 1557-1560.
-
(2000)
Science
, vol.289
, pp. 1557-1560
-
-
Schmid, P.E.1
Tokeshi, M.2
Schmid-Araya, J.M.3
-
25
-
-
0035810199
-
Invariant scaling relations across tree-dominated communities
-
Enquist BJ, Niklas KJ (2001) Invariant scaling relations across tree-dominated communities. Nature 410: 655-660.
-
(2001)
Nature
, vol.410
, pp. 655-660
-
-
Enquist, B.J.1
Niklas, K.J.2
-
26
-
-
0037155606
-
A common rule for the scaling of carnivore density
-
Carbone C, Gittleman JL (2002) A common rule for the scaling of carnivore density. Science 295: 2273-2276.
-
(2002)
Science
, vol.295
, pp. 2273-2276
-
-
Carbone, C.1
Gittleman, J.L.2
-
27
-
-
0037052531
-
Global dispersal of free-living microbial eukaryote species
-
Finlay BJ (2002) Global dispersal of free-living microbial eukaryote species. Science 296: 1061-1063.
-
(2002)
Science
, vol.296
, pp. 1061-1063
-
-
Finlay, B.J.1
-
29
-
-
2942568227
-
A molecular timescale of eukaryote evolution and the rise of complex multicellular life
-
Hedges SB, Blair JE, Venturi ML, Shoe JL (2004) A molecular timescale of eukaryote evolution and the rise of complex multicellular life. BMC Evol Biol 4: 2.
-
(2004)
BMC Evol Biol
, vol.4
, pp. 2
-
-
Hedges, S.B.1
Blair, J.E.2
Venturi, M.L.3
Shoe, J.L.4
-
30
-
-
13444282474
-
InterPro, progress and status in 2005
-
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, et al. (2005) InterPro, progress and status in 2005. Nucleic Acids Res 33: D201-D205.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Mulder, N.J.1
Apweiler, R.2
Attwood, T.K.3
Bairoch, A.4
Bateman, A.5
-
31
-
-
19344365307
-
Planting the seeds of a new paradigm
-
Matzke MA, Matzke AJ (2004) Planting the seeds of a new paradigm. PLoS Biol 2: E133.
-
(2004)
PLoS Biol
, vol.2
-
-
Matzke, M.A.1
Matzke, A.J.2
-
32
-
-
0036066765
-
The role of lineage-specific gene family expansion in the evolution of eukaryotes
-
Lespinet O, Wolf YI, Koonin EV, Aravind L (2002) The role of lineage-specific gene family expansion in the evolution of eukaryotes. Genome Res 12: 1048-1059.
-
(2002)
Genome Res
, vol.12
, pp. 1048-1059
-
-
Lespinet, O.1
Wolf, Y.I.2
Koonin, E.V.3
Aravind, L.4
-
33
-
-
0034625235
-
The impact of comparative genomics on our understanding of evolution
-
Koonin EV, Aravind L, Kondrashov AS (2000) The impact of comparative genomics on our understanding of evolution. Cell 101: 573-576.
-
(2000)
Cell
, vol.101
, pp. 573-576
-
-
Koonin, E.V.1
Aravind, L.2
Kondrashov, A.S.3
-
36
-
-
0000187138
-
The response of protein structures to amino-acid-sequence changes
-
Lesk AM, Chothia CH (1986) The response of protein structures to amino-acid-sequence changes. Philos Transact A Math Phys Eng Sci 317: 345-356.
-
(1986)
Philos Transact A Math Phys Eng Sci
, vol.317
, pp. 345-356
-
-
Lesk, A.M.1
Chothia, C.H.2
-
37
-
-
0035816218
-
Domain combinations in archaeal, eubacterial and eukaryotic proteomes
-
Apic G, Gough J, Teichmann SA (2001) Domain combinations in archaeal, eubacterial and eukaryotic proteomes. J Mol Biol 310: 311-325.
-
(2001)
J Mol Biol
, vol.310
, pp. 311-325
-
-
Apic, G.1
Gough, J.2
Teichmann, S.A.3
-
38
-
-
12344261833
-
The relationship between domain duplication and recombination
-
Vogel C, Teichmann SA, Pereira-Leal JB (2005) The relationship between domain duplication and recombination. J Mol Biol 346: 355-365.
-
(2005)
J Mol Biol
, vol.346
, pp. 355-365
-
-
Vogel, C.1
Teichmann, S.A.2
Pereira-Leal, J.B.3
-
39
-
-
0035865239
-
Evolutionary analyses of the human genome
-
Li WH, Gu Z, Wang H, Nekrutenko A (2001) Evolutionary analyses of the human genome. Nature 409: 847-849.
-
(2001)
Nature
, vol.409
, pp. 847-849
-
-
Li, W.H.1
Gu, Z.2
Wang, H.3
Nekrutenko, A.4
-
40
-
-
0035313496
-
Nuclear receptors in nematodes: Themes and variations
-
Sluder AE, Maina CV (2001) Nuclear receptors in nematodes: themes and variations. Trends Genet 17: 206-213.
-
(2001)
Trends Genet
, vol.17
, pp. 206-213
-
-
Sluder, A.E.1
Maina, C.V.2
-
41
-
-
0035907342
-
Molecular biology and evolution. Can genes explain biological complexity?
-
Szathmary E, Jordan F, Pal C (2001) Molecular biology and evolution. Can genes explain biological complexity? Science 292: 1315-1316.
-
(2001)
Science
, vol.292
, pp. 1315-1316
-
-
Szathmary, E.1
Jordan, F.2
Pal, C.3
-
42
-
-
0036338127
-
Alternative splicing and genome complexity
-
Brett D, Pospisil H, Valcarcel J, Reich J, Bork P (2002) Alternative splicing and genome complexity. Nat Genet 30: 29-30.
-
(2002)
Nat Genet
, vol.30
, pp. 29-30
-
-
Brett, D.1
Pospisil, H.2
Valcarcel, J.3
Reich, J.4
Bork, P.5
-
43
-
-
0345306751
-
The origins of genome complexity
-
Lynch M, Conery J (2003) The origins of genome complexity. Science 302: 1401-1404.
-
(2003)
Science
, vol.302
, pp. 1401-1404
-
-
Lynch, M.1
Conery, J.2
-
44
-
-
0034635465
-
Cell biology: Conservation and novelty in the evolution of cell adhesion and extracellular matrix genes
-
Hutter H, Vogel BE, Plenefisch JD, Norris CR, Proenca RB, et al. (2000) Cell biology: Conservation and novelty in the evolution of cell adhesion and extracellular matrix genes. Science 287: 989-994.
-
(2000)
Science
, vol.287
, pp. 989-994
-
-
Hutter, H.1
Vogel, B.E.2
Plenefisch, J.D.3
Norris, C.R.4
Proenca, R.B.5
-
45
-
-
0034710157
-
The evolution of cell adhesion
-
Hynes RO, Zhao Q (2000) The evolution of cell adhesion. J Cell Biol 150: F89-F96.
-
(2000)
J Cell Biol
, vol.150
-
-
Hynes, R.O.1
Zhao, Q.2
-
46
-
-
0037314097
-
Matrix2png: A utility for visualizing matrix data
-
Pavlidis P, Noble WS (2003) Matrix2png: A utility for visualizing matrix data. Bioinformatics 19: 295-296.
-
(2003)
Bioinformatics
, vol.19
, pp. 295-296
-
-
Pavlidis, P.1
Noble, W.S.2
|