y4xP, an open reading frame located in a type III protein secretion systems locus of Sinorhizobium fredii USDA257 and USDA191, encodes cysteine synthase

Molecular Plant-Microbe Interactions

Volumn 19, Issue 6, 2006, Pages 635-643

  Lorio, Julio C ^a   Chronis, Demosthenis ^a   Krishnan, Hari B ^a  

^a UNIVERSITY OF MISSOURI   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; CYSTEINE SYNTHASE; GENISTEIN; HYBRID PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; ENZYMOLOGY; ESCHERICHIA COLI; GENE DOSAGE; GENE EXPRESSION REGULATION; GENETIC COMPLEMENTATION; GENETICS; METABOLISM; MICROBIOLOGY; MOLECULAR GENETICS; MUTATION; OPEN READING FRAME; PATHOGENICITY; SEQUENCE ALIGNMENT; SINORHIZOBIUM FREDII; SOYBEAN; SYMBIOSIS;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; CYSTEINE SYNTHASE; ESCHERICHIA COLI; GENE DOSAGE; GENE EXPRESSION REGULATION, BACTERIAL; GENETIC COMPLEMENTATION TEST; GENISTEIN; MOLECULAR SEQUENCE DATA; MUTATION; OPEN READING FRAMES; RECOMBINANT FUSION PROTEINS; SEQUENCE ALIGNMENT; SINORHIZOBIUM FREDII; SOYBEANS; SYMBIOSIS;

ESCHERICHIA COLI; EUKARYOTA; GLYCINE MAX; PROKARYOTA; SINORHIZOBIUM FREDII;

EID: 33646891953     PISSN: 08940282     EISSN: None     Source Type: Journal    
DOI: 10.1094/MPMI-19-0635     Document Type: Article

References (39)

1. Alfano, J. R., Bauer, D. W., Milos, T. M., and Collmer, A. 1996. Analysis of the role of the Pseudomonas syringae pv. syringae HrpZ harpin in elicitation of the hypersensitive response in tobacco using functionally non-polar hrpZ deletion mutations, truncated HrpZ fragments, and hrmA mutations. Mol. Microbiol. 19:715-728.
2. Annapurna, K., and Krishnan, H. B. 2003. Molecular aspects of soybean cultivar-specific nodulation by Sinorhizobium fredii USDA257. Indian J. Exp. Biol. 41:1114-1123.
3. Ausubel, F. M., Brent, R., Kingston, R. E., Moore, D. D., Seidman, J. G., and Smith, J. A. 1991. Current protocols in molecular biology. John Wiley & Sons, New York.
4. Bec-Ferte, M. P., Krishnan, H. B., Prome, D., Savagnac, A., Pueppke, S. G., and Prome, J. C. 1994. Structures of nodulation factors from the nitrogen-fixing soybean symbiont Rhizobium fredii USDA257. Biochemistry 33:11782-11788.
5. Bec-Ferte, M. P., Krishnan, H. B., Savagnac, A., Pueppke, S. G., and Prome, J. C. 1996. Rhizobium fredii synthesizes an array of lipooligosaccharides, including a novel compound with glucose inserted into the backbone of the molecule. FEBS (Fed. Eur. Biochem. Soc.) Letters 393:273-279.
6. Bellato, C., Krishnan, H. B., Cubo, T., Temprano, F., and Pueppke, S. G. 1997. The soybean cultivar specificity gene nolX is present, expressed in a nodD-dependent manner, and of symbiotic significance in cultivar-nonspecific strains of Rhizobium (Sinorhizobium) fredii. Microbiology 143:1381-1388.
7. Broughton, W. J., Jabbouri, S., and Perret, X. 2000. Keys to symbiotic harmony. J. Bacteriol. 182:5641-5652.
8. Burnett, W. N. 1981. Western blotting: Electrophoretic transfer of proteins from SDS-polyacrylamide gels to unmodified nitrocellulose and radiographic detection with antibody and radioiodinated protein-A. Anal. Biochem. 112:195-203.
9. Chronis, D., and Krishnan, H. B. 2003. Sulfur assimilation in soybean: Molecular cloning and characterization of O-acetylserine (thiol) lyase (cysteine synthase). Crop Sci. 43:1819-1827.
10. Deakin, W. J., Marie, C., Saad, M. M., Krishnan, H. B., and Broughton, W. J. 2005. NopA is associated with cell surface appendages produced by the type III secretion system of Rhizobium sp. strain NGR234. Mol. Plant-Microbe Interact. 18:499-507.
11. Dénarié, J., Debellé, F., Truchet, G., and Promé, J. C. 1993. Rhizobium and legume nodulation: A molecular dialogue. Pages 19-30 in: New Horizons in Nitrogen Fixation. R. Palacios, J. Moira and W. E. Newton, eds. Kluwer, Dordrecht, The Netherlands.
12. Dénarié, J., Debellé, F, and Promé, J. C. 1996. Rhizobium lipochitooligosaccharide nodulation factors: Signaling molecules mediating recognition and morphogenesis. Ann. Rev. Biochem. 65:503-535.
13. Figurski, D. H., and Helinski, D. R. 1979. Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in trans. Proc. Natl. Acad. Sci. U.S.A. 76:1648-1652.
14. Heron, D. S., and Pueppke, S. G. 1984. Mode of infection, nodulation specificity, and indigenous plasmids of 11 fast-growing Rhizobium japonicum strains. J. Bacteriol. 160:1061-1066.
15. Heron, D. S., Ersek, T., Krishnan, H. B., and Pueppke, S. 1989. Nodulation mutants of Rhizobium fredii USDA257. Mol. Plant-Microbe Interact. 2:4-10.
16. Jiang, G., and Krishnan, H. B. 2000. Sinorhizobium fredii USDA257, a cultivar-specific soybean symbiont, carries two copies of y4yA and y4yB, two open reading frames that are located in a region that encodes the type III protein secretion system. Mol. Plant-Microbe. Interact. 13:1010-1014.
17. Keen, N. T., Tamaki, S., Kobayasi, D., and Trollinger, D. 1988. Improved broad host-range plasmids for DNA cloning in gram-negative bacteria. Gene 70:191-197.
18. Keyser, H. H., Bohlool, B. B., Hu, T. S., and Weber, D. F. 1982. Fast growing rhizobia isolated from root nodules of soybean. Science 215:1631-1632.
19. Kovacs, L. G., Balatti, P. A., Krishnan, H. B., and Pueppke, S. G. 1995. Transcriptional organization and expression of nolXWBTUV, a locus that regulates cultivar-specific nodulation of soybean by Rhizobium fredii USDA257. Mol. Microbiol. 17:923-933.
20. Krause, A., Doerfel, A., and Göttfert, M. 2002. Mutational and transcriptional analysis of the type III secretion systems of Bradyrhizobium japonicum. Mol. Plant-Microbe Interact. 15:1228-1235.
21. Krishnan, H. B., and Pueppke, S. G. 1993. Flavonoid inducers of nodulation genes stimulate Rhizobium fredii USDA257 to export proteins into the environment. Mol. Plant-Microbe Interact. 6:107-113.
22. Krishnan, H. B., Kuo, C. I., and Pueppke, S. G. 1995. Elaboration of flavonoid-induced proteins by the nitrogen-fixing symbiont Rhizobium fredii is regulated by both nodD1 and nodD2, and is dependent on the cultivar specificity locus, nolXWBTUV. Microbiology 141:2245-2251.
23. Krishnan, H. B., Lorio, J., Kim, W. S., Jiang, G., Kim, K. Y., DeBoer, M., and Pueppke, S. G. 2003. Extracellular proteins involved in soybean cultivar-specific nodulation are associated with pilus-like surface appendages and exported by a type 111 protein secretion system in Sinorhizobium fredii USDA257. Mol. Plant-Microbe Interact. 16:617-625.
24. Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685.
25. Lodwig, E. M., Hosie, A. H. E, Bourdes, A., Findlay, K., Allaway, D., Karunakaran, R., Downie, J. A., and Poole, P. S. 2003. Amino-acid cycling drives nitrogen fixation in the legume-Rhizobium symbiosis. Nature 422:722-726.
26. Long, S.R. 1996. Rhizobium symbiosis: Nod factors in perspective. Plant Cell 8:1885-1898.
27. Marie, C., Broughton, W. J., and Deakin, W. J. 2001. Rhizobium type III secretion systems: Legume charmers or alarmers? Curr. Opin. Plant Biol. 4:336-342.
28. Meinhardt, L. W., Krishnan, H. B., Balatti, P. A., and Pueppke, S. G. 1993. Molecular cloning and characterization of a sym plasmid locus that regulates cultivar-specific nodulation of soybean by Rhizobium fredii USDA257. Mol. Microbiol. 9:17-29.
29. + metabolism in Rhizobium-plant symbiosis. Microbiol. Mol. Biol. Rev. 66:203-222.
30. Perret, X., Freiberg, C., Rosenthal, A., Broughton, W. J., and Fellay, R. 1999. High-resolution transcriptional analysis of the symbiotic plasmid of Rhizobium sp. NGR234. Mol. Microbiol. 32:415-425.
31. Pueppke, S. G., Bolanos-Vasquez, M. C., Werner, D., Bec-Ferte, M. P., Prome, J. C., and Krishnan, H. B. 1998. Release of flavonoids by the soybean cultivar McCall and Peking and their perception as signals by the nitrogen-fixing symbiont Sinorhizobium fredii. Plant. Physiol. 117:599-608.
32. Pueppke, S. G., and Broughton, W. J. 1999. Rhizobium sp. strain NGR234 and R. fredii USDA257 share exceptionally broad, nested host ranges. Mol. Plant-Microbe Interact. 12:293-318.
33. Quandt, J., and Hynes, M. F. 1993. Versatile suicide vectors which allow direct selection for gene replacement in gram-negative bacteria. Gene 127:15-21.
34. Sambrook, J., Fritsch, E. F., and Maniatis, T. 1989. Molecular Cloning: A Laboratory Manual, 2nd ed. Cold Spring Harbor Press, Cold Spring Harbor, NY, U.S.A.
35. Schlaman, H. R. M., Okker, R. J. H., and Lugtenberg, B. J. J. 1992. Regulation of nodulation gene expression by NodD in rhizobia. J. Bacteriol. 174:5177-5182.
36. Streit, W. R., Schmitz, Perret, R. A., X., Staehelin, C., Deakin, W. J., Raasch, C., Liesegang, H., and Broughton, W. J. 2004. An evolutionary hot spot: The pNGR234b replicon of Rhizobium sp. strain NGR234. J. Bacteriol. 186:535-542.
37. Vincent, J. M. 1970. A manual for the practical study of root-nodule bacteria. Blackwell Scientific Publications, Oxford.
38. Viprey, V., Del Greco, A., Golinowski, W., Broughton, W. J., and Perret, X. 1998. Symbiotic implications of type III protein secretion machinery in Rhizobium. Mol. Microbiol. 28:1381-1389.
39. Warrilow, A. G. S., and Hawkesford, M. J. 1998. Separation, subcellular location and influence of sulfur nutrition on isoforms of cysteine synthase in spinach. J. Exp. Bot. 49:1625-1636.