Isolation of plasmid pKM101 in the Stocker laboratory

Mutation Research - Reviews in Mutation Research

Volumn 612, Issue 3, 2006, Pages 151-164

  Mortelmans, Kristien ^a  

^a SRI INTERNATIONAL   (United States)

Author keywords

Ames test; Bacterial mutagenesis; Bruce A.D. Stocker; mucAB; pKM101; R plasmids; Salmonella microsome assay; umuDC

Indexed keywords

2 AMINOANTHRACENE; 2 NITROFLUORENE; 4 NITROQUINOLINE 1 OXIDE; AFLATOXIN B1; ANTIBIOTIC AGENT; BENZO[A]PYRENE; BENZYL CHLORIDE; DIETHYL SULFATE; FURYLFURAMIDE; LIPOPOLYSACCHARIDE; MESYLIC ACID ETHYL ESTER; MESYLIC ACID METHYL ESTER; METHYLNITRONITROSOGUANIDINE; MUTAGENIC AGENT; NIRIDAZOLE; STERIGMATOCYSTIN; VACCINE;

AMES TEST; ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIUM CULTURE; CARCINOGENICITY; DNA ISOLATION; DNA REPLICATION; DNA TRANSFER; DRUG MARKETING; GENE DELETION; GENE REPLICATION; GENETIC ANALYSIS; GENETIC INCOMPATIBILITY; GENETIC TOXICOLOGY; GENETIC TRANSDUCTION; GOVERNMENT; ISOLATION PROCEDURE; LABORATORY; MEDICAL RESEARCH; MOLECULAR GENETICS; MUTAGENESIS; PEPTIDE SYNTHESIS; PLASMID; PLASMID R 64; PRIORITY JOURNAL; R PLASMID; SALMONELLA; TRANSPOSON; ULTRAVIOLET RADIATION;

CARCINOGENICITY TESTS; HISTORY, 20TH CENTURY; MUTAGENESIS; MUTAGENICITY TESTS; PLASMIDS; PORTRAITS; R FACTORS; SALMONELLA;

ANIMALIA; BACTERIA (MICROORGANISMS); SALMONELLA TYPHIMURIUM;

EID: 33646783607     PISSN: 13835742     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mrrev.2006.03.002     Document Type: Article

References (80)

1. Ames B.N., McCann J., and Yamasaki E. Methods for detecting carcinogens and mutagens with the Salmonella/mammalian-microsome mutagenicity test. Mutat. Res. 31 (1975) 347-364
2. Mortelmans K., and Zeiger E. The Salmonella/microsome mutagenicity assay. Mutat. Res. 455 (2000) 29-60
3. Zeiger E. Carcinogenicity of mutagens: predictive capability of the Salmonella mutagenesis assay for rodent carcinogenicity. Cancer Res. 47 (1987) 1287-1296
4. Zeiger E., Haseman J.K., Shelby M.D., Margolin B.H., and Tennant R.W. Evaluation of four in vitro genetic toxicity tests for predicting rodent carcinogenicity: confirmation of earlier results with 41 additional chemicals. Environ. Mol. Mutagen. 16 Suppl. 18 (1990) 1-14
5. Maron D., and Ames B.N. Revised methods for the Salmonella mutagenicity test. Mutat. Res. 113 (1983) 173-215
6. Levin D.E., Yamasaki E., and Ames B.N. A new Salmonella tester strain for the detection of frameshift mutagens: a run of cytosines as a mutational hot-spot. Mutat. Res. 94 (1982) 315-330
7. Levin D.E., Hollstein M.C., Christman M.F., Schwiers E.A., and Ames B.N. A new Salmonella tester strain (TA102) with A:T base pairs at the site of mutation detects oxidative mutagens. Proc. Natl. Acad. Sci. U.S.A. 79 (1982) 7445-7449
8. Stocker B.A.D., Zinder N.D., and Lederberg J. Transduction of flagella characteristics in Salmonella. J. Gen. Microbiol. 9 (1953) 410-433
9. Stocker B.A.D. Abortive transduction of motility in Salmonella; a non-replicated gene transmitted through many generations to a single descendant. J. Gen. Microbiol. 15 (1956) 575-598
10. Hayes W. The Genetics of Bacteria and their Viruses. second ed. (1968), John Wiley and Sons Inc., New York pp. 96-99, 641-646
11. Roantree R.J., Kuo T., MacPhee D.G., and Stocker B.A.D. The effect of various rough lesions in Salmonella typhimurium upon sensitivity to penicillins. Clin. Res. 17 (1969) 157
12. Roantree R.J., Kuo T., and MacPhee D.G. The effect of defined lipopolysaccharide core defects upon antibiotic resistances of Salmonella typhimurium. J. Gen. Microbiol. 103 (1977) 223-234
13. Roantree R.J., Kuo T., MacPhee D.G., and Stocker B.A.D. Effect of various rough lesions in Salmonella typhimurium upon sensitivity to antibiotics. Bacteriol. Proc. (1969) 79
14. Ames B.N., Lee F.D., and Durston W.E. An improved bacterial test system for the detection and classification of mutagens and carcinogens. Proc. Natl. Acad. Sci. U.S.A. 70 (1973) 782-786
15. Hoiseth S.K., and Stocker B.A.D. Aromatic-dependent Salmonella typhimurium are non-virulent and effective as live vaccine. Nature 291 (1981) 238-239
16. Smith B.P., Dilling G.W., Da Roden L., and Stocker B.A.D. Vaccination of calves with orally administered aromatic-dependent Salmonella dublin. Am. J. Vet. Res. 54 (1993) 1249-1255
17. Stocker B.A.D. Aromatic-dependent Salmonella as anti-bacterial vaccines and as presenters of heterologous antigens or of DNA encoding them. J. Biotechnol. 83 (2000) 45-50
18. Mortelmans K., and Cox M. Evidence that inhibitor(s) are formed which may interfere with the growth of revertant colonies in the Ames Salmonella and the E. coli tryptophan reverse mutation assays when strictly anaerobic conditions are used. Environ. Mol. Mutagen. 20 (1992) 44-52
19. Ryan F.J., and Schneider L.K. The consequences of mutation during the growth of biochemical mutants of Escherichia coli. II. The inhibition of histidine-independent bacteria by histidineless bacteria in unshaken cultures. J. Bacteriol. 58 (1949) 181-189
20. Ryan F.J., and Schneider L.K. The consequences of mutation during the growth of biochemical mutants of Escherichia coli. IV. The mechanism of inhibition of histidine-independent bacteria by histidineless bacteria. J. Bacteriol. 58 (1949) 201-213
21. McCann J., Spingarn N.E., Kobori J., and Ames B.N. Detection of carcinogens as mutagens: bacterial tester strains with R factor plasmids. Proc. Natl. Acad. Sci. U.S.A. 72 (1975) 979-983
22. Novick R.P. Plasmid incompatibility. Microbiol. Rev. 51 (1987) 381-395
23. Mitsuhashi S. Epidemiology and genetics of R factors. Ann. N. Y. Acad. Sci. 182 (1971) 141
24. M. Syvanen, C.I. Kado (Eds.), Horizontal Gene Transfer, second ed., Academic Press, London, UK, 2002.
25. Fredericq P. Colicins. Ann. Rev. Microbiol. 11 (1957) 7-22
26. Watanabe T., Nishida H., Ogata C., Arai T., and Sato S. Episome-mediated transfer of drug resistance to Enterobacteriacea. VII. Two types of naturally occurring R factors. J. Bacteriol. 88 (1964) 716-726
27. Meynell E., and Datta N. The relation of resistance transfer factors to the F-factor (sex-factor) of Escherichia coli K-12. Genet. Res. 7 (1966) 134-140
28. Kontomichalou P., Mitani M., and Clowes R.C. Circular R-factor molecules controlling penicillinase synthesis, replicating in Escherichia coli under either relaxed or stringent control. J. Bacteriol. 104 (1970) 34-44
29. Rownds R. Replication of a bacterial episome under relaxed control. J. Mol. Biol. 44 (1969) 387-402
30. Novick R.P., and Bouanchaud D. Extrachromosomal nature of drug resistance in Staphylococcus aureus. Ann. N. Y. Acad. Sci. 182 (1971) 279-294
31. Willet N.S. The genetics of transmissible plasmids. Ann. Rev. Genet. 6 (1972) 257-268
32. Kingsbury D.T., and Helinski D.R. DNA polymerase as a requirement for the maintenance of the bacterial plasmid colicinogenic factor E1. Biochem. Biophys. Res. Commun. 41 (1971) 1538-1544
33. Watanabe T. Infective heredity of multiple drug resistance in bacteria. Bacteriol. Rev. 27 (1963) 87-115
34. Mitsuhashi S. Transmissible drug-resistance factor R. Gunma J. Med. Sci. 13 (1965) 169
35. Akiba T., Kayama K., Ishiki Y., Kemura S., and Fukushima T. On the mechanism of the development of multiple drug-resistant clones of Shigella. Jpn. J. Microbiol. 4 (1960) 219-227
36. Hänni C., Meyer J., Iida S., and Arber W. Occurrence and properties of composite transposon Tn2672: evolution of multiple drug resistance transposons. J. Bacteriol. 150 (1982) 1266-1273
37. Hall R.M., and Collins C.M. Antibiotic resistance in Gram-negative bacteria: the role of gene cassettes and integrons. Drug Resist. Updat. 1 (1998) 109-119
38. Kidwell M.G., and Lisch D.R. Transposable elements as sources of genomic variation. In: Nancy L., Craig R.C., Gellert M., and Lambowitz A.M. (Eds). Mobile DNA II (2002), ASM Press, Washington, DC 59-92
39. Lebek G. Uber die Entstehung mehrfach resistenter Salmonellen. Ein experimenteller Beitrag. Zentbl. Bakt. Parasit Kde (Abt I Orig) 188 (1963) 494
40. Anderson E.S., and Datta N. Resistance to penicillins and its transfer in Enterobacteriaceae. Lancet 20 (1965) 407-409
41. Davis C.E., and Arrandan J. The evolution of R factors. A study of a "preantibiotic" community in Borneo. N. Engl. J. Med. 282 (1970) 117-122
42. Meynell E., Meynell G.G., and Datta N. Phylogenetic relationships of drug-resistance factors and other transmissible bacterial plasmids. Bacteriol. Rev. 32 (1968) 55-83
43. Howarth S. Resistance to the bactericidal effect of ultraviolet radiation conferred on enterobacteria by the colicin factor ColI. Mutat. Res. 40 (1965) 515-522
44. Howarth S. Increase in frequency of ultraviolet-induced mutation brought about by the colicin factor ColI in Salmonella typhimurium. Mutat. Res. 3 (1966) 129-134
45. MacPhee D.G. Salmonella tyhimurium hisG46 (R-Utrecht): possible use in screening mutagens and carcinogens. Appl. Microbiol. 26 (1973) 1004-1005
46. Drabble W.T., and Stocker B.A.D. R (transmissible drug-resistance) factors in Salmonella typhimurium: pattern of transduction by phage P22 and ultraviolet-protection effect. J. Gen. Microbiol. 53 (1968) 109-123
47. Datta N. Epidemiology and classification of plasmids. In: Schlessinger D. (Ed). Microbiology (1974), American Society for Microbiology, Washington, DC 9-15
48. Ames B.N. The detection of chemical mutagens with enteric bacteria. In: Hollaender A. (Ed). Chemical Mutagens, Principles and Methods for their Detection, vol. 1 (1971), Plenum, New York 267-282
49. K. Mortelmans, Effect of R plasmids on Salmonella typhimurium: UV-killing, UV-mutagenesis and spontaneous mutability, Ph.D. Thesis, Stanford University, 1975.
50. Mortelmans K., and Stocker B.A.D. Segregation of the mutator property of plasmid R46 from its ultraviolet protection property. Mol. Gen. Genet. 167 (1979) 317-327
51. McCalla D.R., and Voutsinos D. On the mutagenicity of nitrofurans. Mutat. Res. 26 (1974) 3-16
52. Cohen S.N., Chang A.C.Y., Boyer H.W., and Helling R.B. Construction of biologically functional bacterial plasmids in vitro. Proc. Natl. Acad. Sci. U.S.A. 70 (1973) 3240-3244
53. Langer P.J., Shanabruch W.G., and Walker G.C. Functional organization of plasmid pKM101. J. Bacteriol. 145 (1981) 1310-1316
54. Kato T., and Shinoura Y. Isolation and characterization of mutants of Escherichia coli deficient in induction of mutations by ultraviolet light. Mol. Gen. Genet. 156 (1977) 121-131
55. Perry K.L., and Walker G.C. Identification of plasmid (pKM101)-coded proteins involved in mutagenesis and UV resistance. Nature 300 (1982) 278-281
56. Walker G.C., and Dobson P.P. Mutagenesis and repair deficiencies of Escherichia coli umuC mutants are suppressed by the plasmid pKM101. Mol. Gen. Genet. 172 (1979) 17-24
57. Walker G.C. Mutagenesis and inducible responses to deoxyribonmucleic acid damage in Escherichia coli. Microbiol. Rev. 48 (1984) 60-93
58. Gabb A., Kenyon C.J., and Walker G.C. Inducibility of a gene product required for UV and chemical mutagenesis. Proc. Natl. Acad. Sci. U.S.A. 78 (1981) 5749-5753
59. +-dependent mutagenesis. Mol. Gen. Genet. 179 (1980) 289-297
60. Elledge S.J., and Walker G.C. The muc genes of pKM101 are induced byDNA damage. J. Bacteriol. 155 (1983) 1306-1315
61. Kronish J., and Walker G.C. The effects of the ultraviolet protecting plasmids pKM101 and R205 on DNA polymerase I activity in Escherichia coli K-12. Mutat. Res. 60 (1979) 135-142
62. Lackey D., Walker G.C., Keng T., and Linn S. Characterization of an endonuclease associated with the drug resistant plasmid pKM101. J. Bacteriol. 131 (1977) 583-588
63. - strains of Escherichia coli. Mol. Gen. Genet. 145 (1976) 303-306
64. Walker G.C. Plasmid (pKM101) mediated enhancement of repair and mutagenesis: dependence on chromosomal genes in Escherichia coli. Mol. Gen. Genet. 152 (1977) 93-103
65. Walker G.C. Isolation and characterization of mutants of the plasmid pKM101 deficient in their ability to enhance mutagenesis and repair. J. Bacteriol. 133 (1978) 1203-1211
66. Todd P.A., and Glickman B.W. UV protection and mutagenesis in uvrD, uvrE, and recL strains of Escherichia coli carrying the pKM101 plasmid. Mutat. Res. 62 (1979) 451-457
67. Mortelmans K., and Dousman L. Mutagenesis and plasmids. In: deSerres F. (Ed). Chemical Mutagens, Principles and Methods for their detection (1986), Plenum Publishing Company, vol. 10, NY 469-507
68. Fowler R.G., McGinty L.D., and Mortelmans K.E. Spontaneous mutational specificity of drug resistance plasmid pKM101 in Escherichia coli. J. Bacteriol. 140 (1979) 929-937
69. Fowler R.G., McGinty L.D., and Mortelmans K.E. Mutational specificity of ultraviolet light in Escherichia coli with and without the R-plasmid pKM101. Genetics 99 (1981) 25-40
70. D.L. Spanggord, The effects of R plasmids R269, R390 and Rsa on UV-sensitivity, spontaneous and UV-induced mutagenesis in Escherichia coli, M.A. Thesis, San Jose State University, San Jose, CA, 1982.
71. Eisenstadt E., Miller J.K., Kahng L.-S., and Barnes W.M. Influence of uvrB and pKM101 on the spectrum of spontaneous, UV- and γ-ray-induced base substitutions that revert hisG46 in Salmonella typhimurium. Mutat. Res. 210 (1989) 113-125
72. Gordon A.J., Bernelot-Moens C., and Glickman B.W. Spontaneous mutagenesis in Escherichia coli harbouring plasmid pKM101: DNA sequence analysis of forward lacI mutations. Mutagenesis 8 (1993) 133-139
73. Fix D.F., Burns P.A., and Glickman B.W. DNA sequence analysis of spontaneous mutations in a polA1 strain of Echerichia coli indicates sequence specific effects. Mol. Gen. Genet. 207 (1987) 267-272
74. DeMarini D.M., Shelton M.L., Abu-Shakra A., Szakmary A., and Levine J.G. Spectra of spontaneous frameshift mutations at the hisD3052 allele of Salmonella typhimurium in four DNA repair backgrounds. Genetics 149 (1998) 17-36
75. R.G. Fowler, http://www2.sjsu.edu/depts/Biology/RUMBA/FowlerRUMBA.htm.
76. Byrd D.R., Sampson J.K., Ragonese H.M., and Matson S.W. Structure-function analysis of Escherichia coli DNA helicase I reveals non-overlapping transesterase and helicase domains. J. Biol. Chem. 277 (2002) 42645-42653
77. Pohlman R.F., Gentii H.D., and Winans S.C. Common ancestry between IncN conjugal transfer genes and macromolecular export systems of plant ananimal pathogens. Mol. Microbiol. 14 (1994) 655-668
78. Baron C., Llosa M., Zhou S., and Zambryski P.C. VirB1 a component of the t-complex transfer machinery of Agrobacterium tumefaciens, is processed to a C-terminal secreted protein, Virb1*. J. Bacteriol. 179 (1997) 1203-1210
79. Höppner C., Liu Z., Domke N., Binns A.N., and Baron C. VirB1 orthologs from Brucella suis and pKM101 complement defects of the lytic transglycosylase required for efficient type IV secretion from Agrobacterium tumefaciens. J. Bacteriol. 186 (2004) 1415-1422
80. Mortelmans K., and Stocker B.A.D. Ultraviolet light protection, enhancement of ultraviolet light mutagenesis and mutator effect of plasmid R46 in Salmonella typhimurium. J. Bacteriol. 128 (1976) 271-282