-
1
-
-
0029191637
-
Phylogeny of whales: Dependence of the inference on species sampling
-
Adachi, J., and M. Hasegawa. 1995. Phylogeny of whales: dependence of the inference on species sampling. Mol. Biol. Evol. 12:177-179.
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 177-179
-
-
Adachi, J.1
Hasegawa, M.2
-
2
-
-
0027255205
-
Sequence organization and evolution, in all extant whalebone whales, of a DNA satellite with terminal chromosome localization
-
Adegoke, J. A., U. Arnason, and B. Widegren. 1993. Sequence organization and evolution, in all extant whalebone whales, of a DNA satellite with terminal chromosome localization. Chromosoma 102:382-388.
-
(1993)
Chromosoma
, vol.102
, pp. 382-388
-
-
Adegoke, J.A.1
Arnason, U.2
Widegren, B.3
-
3
-
-
0026471922
-
Mysticete (baleen whale) relationships based upon the sequence of the common cetacean DNA satellite
-
Arnason, U., S. Gretarsdottir, and B. Widegren. 1992. Mysticete (baleen whale) relationships based upon the sequence of the common cetacean DNA satellite. Mol. Biol. Evol. 9:1018-1028.
-
(1992)
Mol. Biol. Evol.
, vol.9
, pp. 1018-1028
-
-
Arnason, U.1
Gretarsdottir, S.2
Widegren, B.3
-
4
-
-
0028118741
-
Relationship of baleen whales established by cytochrome b gene sequence comparison
-
Arnason, U., and A. Gullberg. 1994. Relationship of baleen whales established by cytochrome b gene sequence comparison. Nature 367:726-728.
-
(1994)
Nature
, vol.367
, pp. 726-728
-
-
Arnason, U.1
Gullberg, A.2
-
5
-
-
0030026404
-
Cytochrome b nucleotide sequences and the identification of five primary lineages of extant cetaceans
-
_. 1996. Cytochrome b nucleotide sequences and the identification of five primary lineages of extant cetaceans. Mol. Biol. Evol. 13:407-417.
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 407-417
-
-
-
6
-
-
2942529014
-
Mitogenomic analyses provide new insights into cetacean origin and evolution
-
Arnason, U., A. Gullberg, and A. Janke. 2004. Mitogenomic analyses provide new insights into cetacean origin and evolution. Gene 333:27-34.
-
(2004)
Gene
, vol.333
, pp. 27-34
-
-
Arnason, U.1
Gullberg, A.2
Janke, A.3
-
7
-
-
0027268410
-
Cetacean mitochondrial DNA control region: Sequences of all extant baleen whales and two sperm whale species
-
Arnason, U., A. Gullberg, and B. Widegren. 1993. Cetacean mitochondrial DNA control region: sequences of all extant baleen whales and two sperm whale species. Mol. Biol. Evol. 10:960-970.
-
(1993)
Mol. Biol. Evol.
, vol.10
, pp. 960-970
-
-
Arnason, U.1
Gullberg, A.2
Widegren, B.3
-
8
-
-
0027296884
-
Abundant mitochondrial DNA variation and world-wide population structure in humpback whales
-
USA
-
Baker, C. S., A. Perry, J. L. Bannister et al. (14 co-authors). 1993. Abundant mitochondrial DNA variation and world-wide population structure in humpback whales. Proc. Natl. Acad. Sci. USA 90:8239-8243.
-
(1993)
Proc. Natl. Acad. Sci.
, vol.90
, pp. 8239-8243
-
-
Baker, C.S.1
Perry, A.2
Bannister, J.L.3
-
9
-
-
0002032912
-
The fossil record and phyletic relationships of gray whales
-
M. L. Jones, S. L. Swartz, and S. Leatherwood, eds. Academic Press, New York
-
Barnes, L. G., and S. A. McLeod. 1984. The fossil record and phyletic relationships of gray whales. Pp. 3-32 in M. L. Jones, S. L. Swartz, and S. Leatherwood, eds. The gray whale, Eschrichtius robustus. Academic Press, New York.
-
(1984)
The Gray Whale, Eschrichtius Robustus
, pp. 3-32
-
-
Barnes, L.G.1
McLeod, S.A.2
-
10
-
-
0017148259
-
A general method for isolation of high molecular weight DNA from eukaryotes
-
Blin, N., and D. W. Stafford. 1976. A general method for isolation of high molecular weight DNA from eukaryotes. Nucleic Acids Res. 3:2303-2308.
-
(1976)
Nucleic Acids Res.
, vol.3
, pp. 2303-2308
-
-
Blin, N.1
Stafford, D.W.2
-
11
-
-
12944281105
-
Independent adaptation to riverine habitats allowed survival of ancient cetacean lineages
-
USA
-
Cassens, I., S. Vicario, B. Waddell et al. (13 co-authors). 2000. Independent adaptation to riverine habitats allowed survival of ancient cetacean lineages. Proc. Natl. Acad. Sci. USA 97:11343-11347.
-
(2000)
Proc. Natl. Acad. Sci.
, vol.97
, pp. 11343-11347
-
-
Cassens, I.1
Vicario, S.2
Waddell, B.3
-
12
-
-
0033611546
-
Genetic tracking of a protected whale
-
Cipriano, F., and S. R. Palumbi. 1999. Genetic tracking of a protected whale. Nature 397:307-308.
-
(1999)
Nature
, vol.397
, pp. 307-308
-
-
Cipriano, F.1
Palumbi, S.R.2
-
13
-
-
0001804147
-
Molecular evidence for the phylogenetic affinities of Cetacea
-
J. G. M. Thewissen, ed. Plenum, New York
-
Gatesy, J. 1998. Molecular evidence for the phylogenetic affinities of Cetacea. Pp. 63-111 in J. G. M. Thewissen, ed. The emergence of whales. Plenum, New York.
-
(1998)
The Emergence of Whales
, pp. 63-111
-
-
Gatesy, J.1
-
14
-
-
0035819845
-
Evolution of river dolphins
-
Hamilton, H., S. Caballero, A. G. Collins, and R. L. Brownell Jr. 2001. Evolution of river dolphins. Proc. R. Soc. Lond. B Biol. Sci. 268:549-556.
-
(2001)
Proc. R. Soc. Lond. B Biol. Sci.
, vol.268
, pp. 549-556
-
-
Hamilton, H.1
Caballero, S.2
Collins, A.G.3
Brownell Jr., R.L.4
-
15
-
-
0033621180
-
SINEs of the perfect character
-
USA
-
Hillis, D. M. 1999. SINEs of the perfect character. Proc. Natl. Acad. Sci. USA 96:9979-9981.
-
(1999)
Proc. Natl. Acad. Sci.
, vol.96
, pp. 9979-9981
-
-
Hillis, D.M.1
-
16
-
-
0034682732
-
Genetics. L1 retrotransposons shape the mammalian genome
-
Kazazian, H. H. Jr. 2000. Genetics. L1 retrotransposons shape the mammalian genome. Science 289:1152-1153.
-
(2000)
Science
, vol.289
, pp. 1152-1153
-
-
Kazazian Jr., H.H.1
-
17
-
-
0345115718
-
Order Cetacea
-
D. E. Wilson and D. M. Reeder, eds. Smithsonian Inst. Press, Washington, D.C.
-
Mead, J. M., and R. L. Brownell. 1993. Order Cetacea. Pp. 349-364 in D. E. Wilson and D. M. Reeder, eds. Mammal species of the world. Smithsonian Inst. Press, Washington, D.C.
-
(1993)
Mammal Species of the World
, pp. 349-364
-
-
Mead, J.M.1
Brownell, R.L.2
-
18
-
-
0001620217
-
Molecular phylogeny of cetaceans prompts revision of morphological transformations
-
Milinkovitch, M. C. 1995. Molecular phylogeny of cetaceans prompts revision of morphological transformations. Trends Ecol. Evol. 10:328-334.
-
(1995)
Trends Ecol. Evol.
, vol.10
, pp. 328-334
-
-
Milinkovitch, M.C.1
-
19
-
-
0027466080
-
Revised phylogeny of whales suggested by mitochondrial ribosomal DNA sequences
-
Milinkovitch, M. C., G. Orti, and A. Meyer. 1993. Revised phylogeny of whales suggested by mitochondrial ribosomal DNA sequences. Nature 361:346-348.
-
(1993)
Nature
, vol.361
, pp. 346-348
-
-
Milinkovitch, M.C.1
Orti, G.2
Meyer, A.3
-
20
-
-
0033523981
-
Molecular systematics: Perfect SINEs of evolutionary history?
-
Miyamoto, M. M. 1999. Molecular systematics: perfect SINEs of evolutionary history? Curr. Biol. 9:R816-R819.
-
(1999)
Curr. Biol.
, vol.9
-
-
Miyamoto, M.M.1
-
23
-
-
0035158692
-
Evolution of CHR-2 SINEs in cetartiodactyl genomes: Possible evidence for the monophyletic origin of toothed whales
-
Nikaido, M., F. Matsuno, H. Abe, M. Shimamura, H. Hamilton, H. Matsubayashi, and N. Okada. 2001a. Evolution of CHR-2 SINEs in cetartiodactyl genomes: possible evidence for the monophyletic origin of toothed whales. Mamm. Genome 12:909-915.
-
(2001)
Mamm. Genome
, vol.12
, pp. 909-915
-
-
Nikaido, M.1
Matsuno, F.2
Abe, H.3
Shimamura, M.4
Hamilton, H.5
Matsubayashi, H.6
Okada, N.7
-
24
-
-
0035912816
-
Retroposon analysis of major cetacean lineages: The monophyly of toothed whales and the paraphyly of river dolphins
-
USA
-
Nikaido, M., F. Matsuno, H. Hamilton et al. (11 co-authors). 2001b. Retroposon analysis of major cetacean lineages: the monophyly of toothed whales and the paraphyly of river dolphins. Proc. Natl. Acad. Sci. USA 98:7384-7389.
-
(2001)
Proc. Natl. Acad. Sci.
, vol.98
, pp. 7384-7389
-
-
Nikaido, M.1
Matsuno, F.2
Hamilton, H.3
-
25
-
-
0033621101
-
Phylogenetic relationships among cetartiodactyls based on insertions of short and long interspersed elements: Hippopotamuses are the closest extant relatives of whales
-
USA
-
Nikaido, M., A. P. Rooney, and N. Okada. 1999. Phylogenetic relationships among cetartiodactyls based on insertions of short and long interspersed elements: hippopotamuses are the closest extant relatives of whales. Proc. Natl. Acad. Sci. USA 96:10261-10266.
-
(1999)
Proc. Natl. Acad. Sci.
, vol.96
, pp. 10261-10266
-
-
Nikaido, M.1
Rooney, A.P.2
Okada, N.3
-
27
-
-
0001414578
-
SINEs: Short interspersed repeated elements of the eukaryotic genome
-
_. 1991b. SINEs: short interspersed repeated elements of the eukaryotic genome. Trends Ecol. Evol. 6:358-361.
-
(1991)
Trends Ecol. Evol.
, vol.6
, pp. 358-361
-
-
-
28
-
-
2542452120
-
Retroposon mapping in molecular systematics
-
W. J. Miller and P. Capy, eds. Humana Press, N.J.
-
Okada, N., A. M. Shedlock, and M. Nikaido. 2004. Retroposon mapping in molecular systematics. Pp. 189-226 in W. J. Miller and P. Capy, eds. Mobile genetic elements. Humana Press, N.J.
-
(2004)
Mobile Genetic Elements
, pp. 189-226
-
-
Okada, N.1
Shedlock, A.M.2
Nikaido, M.3
-
29
-
-
0023822631
-
Relationships between gene trees and species trees
-
Pamilo, P., and M. Nei. 1988. Relationships between gene trees and species trees. Mol. Biol. Evol. 5:568-583.
-
(1988)
Mol. Biol. Evol.
, vol.5
, pp. 568-583
-
-
Pamilo, P.1
Nei, M.2
-
31
-
-
0022435396
-
Origins of repeated DNA
-
Rogers, J. H. 1985. Origins of repeated DNA. Nature 317:765-766.
-
(1985)
Nature
, vol.317
, pp. 765-766
-
-
Rogers, J.H.1
-
32
-
-
3843115694
-
Phylogeny of mysticete whales based on mitochondrial and nuclear data
-
Rychel, A. L., T. W. Reeder, and A. Berta. 2004. Phylogeny of mysticete whales based on mitochondrial and nuclear data. Mol. Phylogenet. Evol. 32:892-901.
-
(2004)
Mol. Phylogenet. Evol.
, vol.32
, pp. 892-901
-
-
Rychel, A.L.1
Reeder, T.W.2
Berta, A.3
-
33
-
-
20144387748
-
Mitochondrial phylogenetics and evolution of mysticete whales
-
Sasaki, T., M. Nikaido, H. Healy et al. (11 co-authors). 2005. Mitochondrial phylogenetics and evolution of mysticete whales. Syst. Biol. 54:77-90.
-
(2005)
Syst. Biol.
, vol.54
, pp. 77-90
-
-
Sasaki, T.1
Nikaido, M.2
Healy, H.3
-
34
-
-
0034351398
-
SINE evolution, missing data, and the origin of whales
-
Shedlock, A. M., M. C. Milinkovitch, and N. Okada. 2000. SINE evolution, missing data, and the origin of whales. Syst. Biol. 49:808-817.
-
(2000)
Syst. Biol.
, vol.49
, pp. 808-817
-
-
Shedlock, A.M.1
Milinkovitch, M.C.2
Okada, N.3
-
35
-
-
0033964296
-
SINE insertions: Powerful tools for molecular systematics
-
Shedlock, A. M., and N. Okada. 2000. SINE insertions: powerful tools for molecular systematics. Bioessays 22:148-160.
-
(2000)
Bioessays
, vol.22
, pp. 148-160
-
-
Shedlock, A.M.1
Okada, N.2
-
36
-
-
4544222472
-
SINEs of speciation: Tracking lineages with retroposons
-
Shedlock, A. M., K. Takahashi, and N. Okada. 2004. SINEs of speciation: tracking lineages with retroposons. Trends Ecol. Evol. 19:545-553.
-
(2004)
Trends Ecol. Evol.
, vol.19
, pp. 545-553
-
-
Shedlock, A.M.1
Takahashi, K.2
Okada, N.3
-
37
-
-
0030794201
-
Molecular evidence from retroposons that whales form a clade within even-toed ungulates
-
Shimamura, M., H. Yasue, K. Ohshima, H. Abe, H. Kato, T. Kishiro, M. Goto, I. Munechika, and N. Okada. 1997. Molecular evidence from retroposons that whales form a clade within even-toed ungulates. Nature 388:666-670.
-
(1997)
Nature
, vol.388
, pp. 666-670
-
-
Shimamura, M.1
Yasue, H.2
Ohshima, K.3
Abe, H.4
Kato, H.5
Kishiro, T.6
Goto, M.7
Munechika, I.8
Okada, N.9
-
38
-
-
0029794321
-
Phylogenetic evidence from the IRBP gene for the paraphyly of toothed whales, with mixed support for Cetacea as a suborder of Artiodactyla
-
Smith, M. R., M. S. Shivji, V. G. Waddell, and M. J. Stanhope. 1996. Phylogenetic evidence from the IRBP gene for the paraphyly of toothed whales, with mixed support for Cetacea as a suborder of Artiodactyla. Mol. Biol. Evol. 13:918-922.
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 918-922
-
-
Smith, M.R.1
Shivji, M.S.2
Waddell, V.G.3
Stanhope, M.J.4
-
40
-
-
0034750288
-
Phylogenetic relationships and ancient incomplete lineage sorting among cichlid fishes in Lake Tanganyika as revealed by analysis of the insertion of retroposons
-
Takahashi, K., Y. Terai, M. Nishida, and N. Okada. 2001. Phylogenetic relationships and ancient incomplete lineage sorting among cichlid fishes in Lake Tanganyika as revealed by analysis of the insertion of retroposons. Mol. Biol. Evol. 18:2057-2066.
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 2057-2066
-
-
Takahashi, K.1
Terai, Y.2
Nishida, M.3
Okada, N.4
-
41
-
-
0024713112
-
Gene genealogy in three related populations: Consistency probability between gene and population trees
-
Takahata, N. 1989. Gene genealogy in three related populations: consistency probability between gene and population trees. Genetics 122:957-966.
-
(1989)
Genetics
, vol.122
, pp. 957-966
-
-
Takahata, N.1
-
42
-
-
0037910330
-
Using SINEs to probe ancient explosive speciation: "hidden" radiation of African cichlids?
-
Terai, Y., K. Takahashi, M. Nishida, T. Sato, and N. Okada. 2003. Using SINEs to probe ancient explosive speciation: "hidden" radiation of African cichlids? Mol. Biol. Evol. 20:924-930.
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 924-930
-
-
Terai, Y.1
Takahashi, K.2
Nishida, M.3
Sato, T.4
Okada, N.5
-
43
-
-
0022555861
-
Nonviral retroposons: Genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information
-
Weiner, A. M., P. L. Deininger, and A. Efstratiadis. 1986. Nonviral retroposons: genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information. Annu. Rev. Biochem. 55:631-661.
-
(1986)
Annu. Rev. Biochem.
, vol.55
, pp. 631-661
-
-
Weiner, A.M.1
Deininger, P.L.2
Efstratiadis, A.3
|