The ozone stress transcriptome of pepper (Capsicum annuum L.)

Molecules and Cells

Volumn 21, Issue 2, 2006, Pages 197-205

  Lee, Sanghyeob ^a   Yun, Sung Chul ^b  

^a SunMoon University   (South Korea)

^b Korea Research Institute of Bioscience and Biotechnology (KRIBB)   (South Korea)

Author keywords

Capsicum annuum; Ozone stress; Transcriptome

Indexed keywords

COMPLEMENTARY DNA; OZONE STRESS TRANSCRIPTOME; TRANSCRIPTOME; UNCLASSIFIED DRUG;

ARTICLE; COLD; CONTROLLED STUDY; CULTIVAR; DNA MICROARRAY; DOWN REGULATION; DROUGHT; GENE EXPRESSION; HOST PATHOGEN INTERACTION; HOST RESISTANCE; NONHUMAN; PEPPER; PLANT DISEASE; PLANT GENETICS; PLANT GROWTH; SALINITY; UPREGULATION;

CAPSICUM; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, PLANT; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; OXIDANTS, PHOTOCHEMICAL; OXIDATIVE STRESS; OZONE; TRANSCRIPTION, GENETIC;

CAPSICUM; CAPSICUM ANNUUM;

EID: 33646564655     PISSN: 10168478     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (44)

1. Agrawal, G. K., Rakwal, R., Yonekura, M., Kubo, A., Saji, H., et al. (2002) Proteome analysis of differentially displayed proteins as a tool for investigating ozone stress in rice (Oryza sativa L.) seedlings. Proteimics 2, 947-959.
2. Alscher, R. G., Erturk, N., and Heath, L. S. (2002) Role of superoxide dismutases (SODs) in controlling oxidative stress in plants. J. Exp. Bot. 53, 1331-1341.
3. Apel, K. and Hirt, H. (2004) Reactive oxygen species: metabolism, oxidative stress, and signal transduction. Annu. Rev. Plant Physiol. Plant. Mol. Biol. 55, 373-399.
4. Blokhina, O., Virolainen, E., and Fagerstedt, K. (2003) Antioxidant, oxidative damage and oxygen deprivation stress: a review. Ann. Bot. 91, 179-194.
5. Conklin, P. L. and Last R. L. (1995) Differential accumulation of antioxidant mRNAs in Arabisopsis thaliana exposed to ozone. Plant Physiol. 109, 203-212.
6. Creissen, G., Firmin, J., Fryer, M., Kular, B., and Leyland, N. (1999) Elevated glutathione biosynthetic capacity in the chloroplasts of transgenic tobacco plants paradoxically causes increased oxidative stress. Plant Cell 11, 1277-1292.
7. Eisen, M. B., Spellman, P. T., Brown, P. O., and Botstein, D. (1998) Cluster analysis and display of genome-wide expression patterns. Proc. Natl. Acad. Sci. USA 95, 14863-14868.
8. Ernst, D., Schraudner, M., Langebartels, C., and Sandermann, H. Jr. (1992) Ozone-induce changes of mRNA of beta-1, 30 glucanase, chitinase, and 'pathogenesis-related' protein 1b in tobacco plants. Plant Mol. Biol. 20, 673-682.
9. Ginzinger, D. G., Godfrey, T. E., Nigro, J., Moore, D. H., Suzuki, S., et al. (2000) Measurement of DNA copy number at microsatellite loci using quantative PCR analysis. Cancer Res. 60, 5405-5409.
10. Greenberg, J. T., Guo, A., Klessig, D. F., and Ausubel, F. M. (1994) Progarmmed cell death in plants: A pathogen-triggered response activated coordinately with multiple defense functions. Cell 77, 551-563.
11. Hung, C. J., Ginzinger, D. G., Zarnegar, R., Kanauchi, H., Wong, M. G., et al. (2003) Expression of vascular endothelial growth factor-C in benign and malignant thyroid tumors. J. Clin. Endocrinol. Metab. 88, 3694-3696.
12. Karpinski, S., Reynolds, H., Karpinska, B., Wingsle, G., Creissen, G., et al. (1999) Systemic signaling and acclimation in response to excess excitation energy in Arabidopsis. Science 284, 654-657.
13. 3 regimes. Environ. Pollut. 73, 137-152.
14. Livingstone, K. D., Lackney, V. K., Blauth, J. R., van Wijk, R., and Jahn, M. K. (1999) Genome mapping in capsicum and the evolution of genome structure in the solanaceae. Genetics 152, 1183-1202.
15. Lee, S., Kim, S. Y., Chung, E., Jung, Y. H., Pai, H. S., et al. (2004) EST and microarray analyses of pathogen-responsive genes in hot pepper (Capsicum annuum L.) non-host resistance against soybean pustule pathogen (Xanthomonas axonopodis pv. glycines). Funct. Integr. Genomics. 4, 196-205.
16. Ludwikow, A., Gallois, P., and Sadowski, J. (2004) Ozone-induced oxidative stress response in Arabidopsis: transcription profiling by microarray approach. Cell Mol. Biol. Lett. 9, 829-842.
17. McClung, C. R. (1997) Regulation of catalases in Arabidopsis. Free Radic. Biol. Med. 23, 489-496.
18. Mittler, R. (2002) Oxidative stress, antioxidants and stress tolerance. Trends. Plant Sci. 7, 405-710.
19. Moeder, W., Barry, C. S., Tauriainen, A. A., Betz, C., Tuomainen, J., et al. (2002) Ethylene synthesis regulated by biphasic induction of 1-aminocyclopropane-1-carboxylic acid synthase and 1-aminocyclopropane-1-carboxylic acid oxidase genes is required for hydrogen peroxide accumulation and cell death in ozone-exposed tomato. Plant Physiol. 130, 1918-1926.
20. Mudd, J. B. (1997) Biochemical basis for the toxicity of ozone; in Plant Response to Air Polution, Yunus, M. and lqba, M. (eds.), pp. 267-284, Wiley & Sons, New York.
21. Overmyer, K., Brosche, M., and Kangasjarvl, J. (2003) Reactive oxygen species and hormonal control of cell death. Trends Plant Sci. 8, 335-342.
22. Pasqualini, S., Piccioni, C., Reals, L., Ederli, L., Torre, G. D., et al. (2003) Ozone-induced cell death in tobacco cultivar Bel W3 plant. The role of programmed cell death in lesion formation. Plant Physiol. 133, 1122-1134.
23. Prasad, T. K., Anderson, M. D., Martin, B. A., and Steward, C. R. (1994) Evidence for chilling-induced oxidative stress in maize seedlings and a regulatory role for hydrogen peroxide. Plant Cell 6, 65-74.
24. Rao, M. V., Koch, J. R., and Davis, K. R. (2000) Ozone: a tool for probing programmed cell death in plants. Plant Mol. Biol. 44, 345-358.
25. Rao, M., Lee, H. I., and Davis, K. R. (2002) Ozone-induced ethylene production is dependent on salicylic acid, and both salicylic acid and ethylene act in concert to regulate ozone-induced cell death. Plant J. 32, 447-456.
26. Richards, K. D., Schott, E. J., Sharma, Y. K., Davis, K. R., and Gardner, R. C. (1998) Aluminum induces oxidative stress genes in Arabidopsis thaliana. Plant Physiol. 116, 409-418.
27. Ruzsa, S. M., Mylona, P., and Scandalios, J. G. (1999) Differential response of antioxidant genes in maize leaves exposed to ozone. Redox Rep. 4, 95-103.
28. Saeed, A. I., Sharov, V., White, J., Li, J., Liang, W., et al. (2003) TM4: a free, open-source system for microarray data management and analysis. Biotechniques 34, 374-378.
29. Sandermann, H. Jr. (1996) Ozone and plant health. Annu. Rev. Phytopathol. 34, 347-366.
30. Sandermann, H. Jr., Ernst, E., Heller, W., and Langebartels, C. (1998) Ozone: An abiotic elicitor of plant defence reactions. Trends. Plant Sci. 3, 47-49.
31. Sharma, Y., Leon, J., Raskin, I., and Davis, K. R. (1996) Ozone-induce responses in Arabidopsis thaliana: The role of salicylic acid in the accumulation of defense-related transcripts and induced resistance. Proc. Natl. Acad. Sci. USA 93, 5099-5104.
32. Sharma, Y. K. and Davis, K. R. (1994) Ozone-induced expression of stress-related genes in Arabidopsis thaliana. Plant Physiol. 105, 1089-1096.
33. Sharma, Y. K. and Davis, K. R. (1997) The effects of ozone on antioxidant responses in plants. Free Radic. Biol. Med. 23, 480-488.
34. Sharma, Y. K., Leon, J., Raskin, I., and Davis, K. R. (1996) Ozone-induced responses in Arabidopsis thaliana: the role of salicylic acid in the accumulation of defense-related transcripts and induced resistance. Proc. Natl. Acad. Sci. USA. 93, 5099-5104.
35. Surplus, S. L., Jordan, B. R., Murphy, A. M., Carr, J. P., Thomas, B., et al. (1998) Ultraviolet-B-induced responses in Arabidopsis thaliana: role of salicylic acid and reactive oxygen species in the regulation of transcripts encoding photosynthetic and acidic pathogenesis-related proteins. Plant cell environ. 21, 685-694.
36. Tamaoki, M., Matsuyama, T., Kanna, M., Nakajima, N., Kubo, A., et al. (2003a) Differential ozone sensitivity among Arabidopsis accessions and its relevance to ethylene synthesis. Planta. 216, 552-560.
37. 3-exposed Arabidopsis reveals that multiple signal pathways act mutually antagonistically to induce gene expression. Plant Mol. Biol. 53, 443-456.
38. Tenhaken, R., Levine, A., Brisson, L. F., Dixon R. A., and Lamb, C. (1995) Function of the oxidative burst in hypersensitive disease resistance. Proc. Natl. Acad. Sci. USA 92, 4158-4163.
39. Tognolli, M., Penel, C., Greppin, H., and Simon, P. (2002) Analysis and expression of the class III peroxidase large gene family in Arabidopsis thaliana. Gene. 288, 129-138.
40. Tuomainen, J., Kangasjarvi, J., Betz, C., Ernest, D., Langebartels, C., et al. (1995) Ozone activation of ethylene biosynthesis proceeds via differential accumulation of transcripts for 1-aminocyclopropane-1-carboxylate synthase genes; In plant Growth Regulator Conference, Pittsburgh. Abstr No. 362.
41. Van der Hoeven, R., Ronning, C., Giovannoni, J., Martin, G., and Tanksley, S. (2002) Deductions about the number, organization, and evolution of genes in the tomato genome based on analysis of a large expressed sequence tag collection and selective genomic sequencing. Plant Cell 14, 1441-1456.
42. Willekens, H., van Camp, W., Van Montague, M., Inze, D., Langebartels, C., et al. (1994) Ozone, sulfur dioxide, and ultraviolet B have similar effects on mRNA accumulation of antioxidant genes in Nicotiana plumbaginfolia (L.). Plant Physiol. 106, 1007-1014.
43. Yun, S. C. (2004) The Ecophysiological changes of Capsicum annum on Ozone-sensitive and -resistant varieties exposed to short-term ozone stress. Kor. J. Environ. Agri. 23, 128-132.
44. Yun, S. C. and Kim, B. S. (2004) Tropospheric ozone pollutions in Korea during 1998-2002 using two ozone indices for vegetation protection. Kor. J. Agri. For. Meteol. 6, 38-44.