Supertree analyses of the roles of viviparity and habitat in the evolution of atherinomorph fishes

Journal of Evolutionary Biology

Volumn 19, Issue 3, 2006, Pages 734-740

  Mank, J E ^a   Avise, J C ^b  

^a University of Georgia ^*  (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Extinction; Freshwater; Marine; Oviparity; Phylogenetics; Species richness

Indexed keywords

FRESH WATER;

EVOLUTIONARY BIOLOGY; FISH; PARSIMONY ANALYSIS; PHYLOGENETICS; SPECIES CONSERVATION; SPECIES RICHNESS; VIVIPARITY;

ANIMAL; ARTICLE; ENVIRONMENT; EVOLUTION; FEMALE; FISH; GENETIC VARIABILITY; GENETICS; PHYSIOLOGY; REPRODUCTION;

ANIMALS; ENVIRONMENT; EVOLUTION; FEMALE; FISHES; FRESH WATER; REPRODUCTION; VARIATION (GENETICS);

ACTINOPTERYGII; ATHERINOMORPHA; PISCES;

EID: 33646475298     PISSN: 1010061X     EISSN: 14209101     Source Type: Journal    
DOI: 10.1111/j.1420-9101.2005.01060.x     Document Type: Article

References (51)

1. Amoroso E.C. 1968. The evolution of viviparity. Proc. R. Soc. Med. 61 1188 1200.
2. Baillie J.E.M. Hilton-Taylor C. Stuart S.N. 2004. 2004 IUCN Red List of Threatened Species: A Global Species Assessment. IUCN Gland, Switzerland.
3. Baum B.R. 1992. Combining trees as a way of combining data sets for phylogenetic inference, and the desirability of combining gene trees. Taxon 41 3 10.
4. Bennett P.M. Owens I.P.F. 1997. Variation in extinction risk among birds: chance or evolutionary predisposition? Proc. R. Soc. Lond. B 264 401 408.
5. Bininda-Emonds O.R.P. 2004. The evolution of supertrees. Trends Ecol. Evol. 19 315 322.
6. Breder C.M. 1922. Description of the spawning habits of Pseudopleuronectes americanus in captivity. Copeia 102 3 4.
7. Breder C.M. Rosen D.E. 1966. Modes of Reproduction in Fishes. Natural History Press Garden City, NY.
8. Constanz G.D. 1989. Reproductive biology of poeciliid fishes. In: Ecology and Evolution of Livebearing Fishes Meffe G. K. Snelson F. F. eds pp. 33 68. Prentice Hall Englewood Cliffs.
9. Cracraft J. 1981. Pattern and process in paleobiology - the role of cladistic-analysis in systematic paleontology. Paleobiology 4 456 468.
10. Crooks K.R. Soule M.E. 1999. Mesopredator release and avifaunal extinctions in a fragmented system. Nature 400 563 566.
11. Davies T.J. Barraclough T.G. Chase M.W. Soltis P.S. Soltis D.E. Savolainen V. 2004. Darwin's abominable mystery: insights from a supertree of the angiosperms. Proc. Natl. Acad. Sci. USA 101 1904 1909.
12. DeWoody J.A. Avise J.C. 2000. Microsatellite variation in marine, freshwater and anadromous fishes compared with other animals. J. Fish Biol. 56 461 473.
13. Diamond J.M. 1984. 'Normal' extinctions of isolated populations. In: Extinctions Nitecki M. H. ed. pp. 191 246. Chicago University Press Chicago.
14. Eshmeyer W.N. 1990. Catalog of the Genera of Recent Fishes. California Academy of Sciences San Fransisco.
15. Froese R. Pauly D. 2004. Fishbase. http://www.fishbase.org.
16. Ghedotti M.J. 2000. Phylogenetic analysis and taxonomy of the poecilioid fishes (Teleostei: Cyprinodontiformes). Zool. J. Linn. Soc. 130 1 53.
17. Gross M.R. Sargent R.C. 1985. The evolution of male and female parental care in fishes. Am. Zool. 25 807 822.
18. Gross M.R. Shine R. 1981. Parental care and mode of fertilization in ectothermic vertebrates. Evolution 35 775 793.
19. Guillette L.J. 1989. The evolution of vertebrate viviparity: morphological modifications and endocrine control. In: Complex Organismal Functions: Integration and Evolution in Vertebrates Wake D. B. Roth G. eds pp. 219 233. Wiley New York.
20. Helfman G.S. Collette B.B. Facey D.E. 1997. The Diversity of Fishes. Blackwell Science Malden.
21. Jones K.E. Purvis A. MacLarnon A Bininda-Emonds O.R.P. Simmons N.B. 2002. A phylogenetic supertree of the bats (Mammalia: Chiroptera). Biol. Rev. 77 223 259.
22. Jones K.E. Purvis A. Gittleman J.L. 2003. Biological correlated of extinction risk in bats. Am. Nat. 161 601 614.
23. Lande R. 1999. Extinction risks from anthropogenic, ecological, and genetic factors. In: Genetics and Extinction of Species Landweber L. F. Dobson A. P. eds pp. 1 22. Princeton University Press Princeton.
24. Lydeard C. 1993. Phylogenetic analysis of species richness - has viviparity increased the diversification of actinopterygiian fishes. Copeia 1993 514 518.
25. MacArthur R.H. Wilson E.O. 1967. The Equilibrium Theory of Island Biogeography. Princeton University Press Princeton.
26. Maddison D.R. Maddison W.P. 2000. MacClade 4: Analysis of Phylogeny and Character Evolution. Sinauer Sunderland, MA.
27. Mank J.E. Promislow D.E.L. Avise J.C. 2005. Phylogenetic perspectives on the evolution of parental care in fishes. Evolution 59 1570 1578.
28. Meyer A. Lydeard C. 1993. The evolution of copulatory organs, internal fertilization, placentae, and viviparity in killifishes (Cyprinodontiformes) inferred from a DNA phylogeny of the Tyrosine Kinase gene X-src. Proc. R. Soc. Lond. B 254 153 162.
29. Miya M. Takeshima H. Endo H. Ishiguro N.B. Inoue J.G. Mukai T. Satoh T.P. Yamaguchi M. Kawagucki A. Mabuchi K. Shiri S.M. Nishida M. 2003. Major patterns of higher teleostean phylogenies: a new perspective based on 100 complete mitochondrial DNA sequences. Mol. Phylogenet. Evol. 26 121 138.
30. Nee S. Barraclough T.G. Harvey P.H. 1996. Temporal chages in biodiversity: detecting patterns and identifying causes. In: Biodiversity: A Biology of Numbers Gaston K.J. ed. pp. 230 252. Oxford University Press Oxford.
31. Nelson J.S. 1994. Fishes of the World 4th edn. Wiley New York.
32. Nixon K.C. 1999. The parsimony ratchet, a new method for rapid parsimony analysis. Cladistics 15 407 414.
33. Parenti L.R. 1981. A phylogenetic and biogeographic analysis of the cyprinodontiform fishes (Teleostei, Athernomorpha). Bull. Am. Mus. Nat. Hist. 168 335 557.
34. Price S.A. Bininda-Emonds O.R.P. Gittleman J.L. 2005. A complete phylogeny of the whales, dolphins, and even-toed hoofed mammals (Certartiodactyla). Biol. Rev. 80 445 473.
35. Purvis A. Gittleman J.L. Cowlishaw G. Mace G.M. 2000. Predicting extinction risk in declining species. Proc. R. Soc. Lond. B 67 1947 1952.
36. Ragan M.A. 1992. Phylogenetic inference based on matrix representation of trees. Mol. Phylogenet. Evol. 1 53 58.
37. Reznick D.N. Mateos M. Springer M.S. 2002. Independent origins and rapid evolution of the placenta in the fish genus Poeciliopsis. Science 298 1018 1020.
38. Rosen D.E. Gordon M. 1953. Functional anatomy and evolution of male genitalia in poeciliid fishes. Zoologica 38 1 47.
39. Saether B.-E. Engen S. Moller A.P. Visser M.E. Matthysen E. Fiedler W. Lambrechts M.M. Becker P.H. Brommer J.E. Dickinson J. du Deu C. Gehlbach F.R. Merila J. Rendell W. Robertson R.J. Thompson D. Torok J. 2005. Time to extinction of bird populations. Ecology 86 693 700.
40. Schindler J.F. Hamlett W.C. 1993. Maternal-embryonic relations on viviparous teleosts. J. Exp. Zool. 266 378 393.
41. Sikes D.S. Lewis P.O. 2001. pauprat : PAUP Implementation of the Parsimony Ratchet. Distributed by the authorsq7
42. Swofford D.L. 2003. paup* Phylogenetic Analysis Using Parsimony(*and Other Methods) Version 4. Sinauer Sunderland, MA.
43. Trewick S.A. 1997. Flightlessness and phylogeny amongst endemic rails (Aves: Rallidae) of the New Zealand region. Philos. Trans. R. Soc. Lond. B 352 429 446.
44. Vamosi S.M. Vamosi J.C. 2005. Endless tests: guidelines for analyzing non-nested sister-group comparisons. Evol. Ecol. Res. 7 567 579.
45. Vrba E.S. 1983. Macroevolutionary trends - new perspectives on the roles of adaptation and incidental effect. Science 221 387 389.
46. Waters J.M. Wallis G.P. 2001. Cladogenesis and loss of the marine life-history phase in freshwater galaxiid fishes (Osmeriformes: Galaxiidae). Evolution 55 587 597.
47. Winker K. 2000 Evolution - migration and speciation. Nature 404 36.
48. Wourms J.P. 1981. Viviparity, the maternal-fetal relationship in fishes. Dev. Biol. Fishes 21 473 515.
49. Wourms J.P. Grove B.D. Lombardi J. 1988. The maternal-embryonic relationship in viviparous fishes. In: Fish Physiology Hoar W. S. Randall D.J. eds pp. 1 134. Academic Press San Diego.
50. Wourms J.P. Lombardi J. 1992. Reflections on the evolution of piscine viviparity. Am. Zool. 32 276 293.
51. Zauner H. Begemann G. Mari-Beffa M. Meyer A. 2003. Differential regulation of msx genes in the development of the gonopodium, an intromittant organ, and of the ''sword'', a sexually selected trait of swordtail fishes (Xiphophorus). Evol. Dev. 5 466 477.