-
2
-
-
0037967497
-
A block sorting data compression algorithm
-
DIGITAL System Research Center
-
M. Burrows and D.J. Wheeler. A block sorting data compression algorithm. Technical report, DIGITAL System Research Center, 1994.
-
(1994)
Technical Report
-
-
Burrows, M.1
Wheeler, D.J.2
-
3
-
-
0031694349
-
Conflict among individual mitochondrial proteins in resolving the phylogeny of eutherian orders
-
Y. Cao, A. Janke, P. J. Waddell, M. Westerman, O. Takenaka, S. Murata, N. Okada, S. Pääbo, and M. Hasegawa. Conflict among individual mitochondrial proteins in resolving the phylogeny of eutherian orders. J. Mol. Evol., 47:307-322, 1998.
-
(1998)
J. Mol. Evol.
, vol.47
, pp. 307-322
-
-
Cao, Y.1
Janke, A.2
Waddell, P.J.3
Westerman, M.4
Takenaka, O.5
Murata, S.6
Okada, N.7
Pääbo, S.8
Hasegawa, M.9
-
6
-
-
21144458757
-
Comparing sequences with segment rearrangements
-
Proc. of the FSTTCS'03, Bombay, India
-
F. Ergun, S. Muthukrishnan, and C. Sahinalp. Comparing sequences with segment rearrangements. Lecture Notes in Comput. Sci, pages 183-194, 2003. Proc. of the FSTTCS'03, Bombay, India.
-
(2003)
Lecture Notes in Comput. Sci
, pp. 183-194
-
-
Ergun, F.1
Muthukrishnan, S.2
Sahinalp, C.3
-
7
-
-
0001137268
-
The Burrows-Wheeler transform for block sorting text compression: Principles and improvements
-
P. Fenwick. The Burrows-Wheeler transform for block sorting text compression: principles and improvements. The Computer Journal, 39(9):731-740, 1996.
-
(1996)
The Computer Journal
, vol.39
, Issue.9
, pp. 731-740
-
-
Fenwick, P.1
-
8
-
-
0001347739
-
Counting permutations with given cycle structure and descent set
-
I. M. Gessel and C. Reutenauer. Counting permutations with given cycle structure and descent set. J. Combin. Theory Ser. A, 64(2):189-215, 1993.
-
(1993)
J. Combin. Theory Ser. A
, vol.64
, Issue.2
, pp. 189-215
-
-
Gessel, I.M.1
Reutenauer, C.2
-
11
-
-
0010905001
-
Faster suffix sorting
-
LUNDFD6/(NFCS-3140)/l-43/(1999), Department of Computer Science, Lund University, Sweden
-
N. J. Larsson and K. Sadakane. Faster suffix sorting. Technical Report LU-CS-TR:99-214, LUNDFD6/(NFCS-3140)/l-43/(1999), Department of Computer Science, Lund University, Sweden, 1999.
-
(1999)
Technical Report LU-CS-TR:99-214
-
-
Larsson, N.J.1
Sadakane, K.2
-
12
-
-
0035102453
-
An information based sequence distance and its application to whole mitochondrial genome phytogeny
-
M. Li, J.H. Badger, X. Chen, S. Kwong, P. Kearney, and H. Zhang. An information based sequence distance and its application to whole mitochondrial genome phytogeny. Bioinformatics, 17:149-154, 2001.
-
(2001)
Bioinformatics
, vol.17
, pp. 149-154
-
-
Li, M.1
Badger, J.H.2
Chen, X.3
Kwong, S.4
Kearney, P.5
Zhang, H.6
-
13
-
-
10644294829
-
The similarity metric
-
M. Li, X. Chen, X. Li, B. Ma, and P. Vitányi. The similarity metric. IEEE Trans. Inform. Th., 12(5):3250-3264, 2004.
-
(2004)
IEEE Trans. Inform. Th.
, vol.12
, Issue.5
, pp. 3250-3264
-
-
Li, M.1
Chen, X.2
Li, X.3
Ma, B.4
Vitányi, P.5
-
15
-
-
0027681165
-
Suffix arrays: A new method for on-line string searches
-
U. Manber and G. Myers. Suffix arrays: a new method for on-line string searches. SIAM Journal on Computing, 22(5):935-948, 1993.
-
(1993)
SIAM Journal on Computing
, vol.22
, Issue.5
, pp. 935-948
-
-
Manber, U.1
Myers, G.2
-
16
-
-
26444516518
-
An extension of the burrows wheeler transform and applications to sequence comparison and data compression
-
Alberto Apostolico, Maxime Crochemore, and Kunsoo Park, editors, Combinatorial Pattern Matching, 16th Annual Symposium, CPM 2005, Jeju Island, Korea, June 19-22, 2005, Proceedings. Springer
-
S. Mantaci, A. Restivo, G. Rosone, and M. Sciortino. An Extension of the Burrows Wheeler Transform and Applications to Sequence Comparison and Data Compression. In Alberto Apostolico, Maxime Crochemore, and Kunsoo Park, editors, Combinatorial Pattern Matching, 16th Annual Symposium, CPM 2005, Jeju Island, Korea, June 19-22, 2005, Proceedings, volume 3537 of Lecture Notes in Computer Science, pages 178-189. Springer, 2005.
-
(2005)
Lecture Notes in Computer Science
, vol.3537
, pp. 178-189
-
-
Mantaci, S.1
Restivo, A.2
Rosone, G.3
Sciortino, M.4
-
18
-
-
33646195974
-
An extension of the Burrows-Wheeler transform to k words
-
University of Palermo, Dipartimento di Matematica ed Appl., December
-
S. Mantaci, A. Restivo, and M. Sciortino. An extension of the Burrows-Wheeler Transform to k words. Technical Report 267, University of Palermo, Dipartimento di Matematica ed Appl., December 2004.
-
(2004)
Technical Report
, vol.267
-
-
Mantaci, S.1
Restivo, A.2
Sciortino, M.3
-
19
-
-
26944457707
-
An extension of the burrows wheeler transform to k words (extended abstract)
-
IEEE Computer Society
-
S. Mantaci, A. Restivo, and M. Sciortino. An Extension of the Burrows Wheeler Transform to k Words (Extended Abstract). In 2005 Data Compression Conference (DCC 2005), 29-31 March 2005, Snowbird, UT, USA, page 469. IEEE Computer Society, 2005.
-
(2005)
2005 Data Compression Conference (DCC 2005), 29-31 March 2005, Snowbird, UT, USA
, pp. 469
-
-
Mantaci, S.1
Restivo, A.2
Sciortino, M.3
-
21
-
-
0016942292
-
A space-economical suffix tree construction algorithm
-
E. M. McCreight. A space-economical suffix tree construction algorithm. Journal of the ACM, 23(2):262-272, 1976.
-
(1976)
Journal of the ACM
, vol.23
, Issue.2
, pp. 262-272
-
-
McCreight, E.M.1
-
22
-
-
0005751666
-
Periodicity
-
M. Lothaire, chapter 8. Cambridge University Press
-
F. Mignosi and A. Restivo. Periodicity. In M. Lothaire, Algebraic Combinatorics on Words, chapter 8, pages 237-274. Cambridge University Press, 2002.
-
(2002)
Algebraic Combinatorics on Words
, pp. 237-274
-
-
Mignosi, F.1
Restivo, A.2
-
23
-
-
0242643741
-
A new sequence distance measure for phylogenetic tree construction
-
H.H. Otu and K. Sayood. A new sequence distance measure for phylogenetic tree construction. Bioinformatics, 19(16):2122-2130, 2003.
-
(2003)
Bioinformatics
, vol.19
, Issue.16
, pp. 2122-2130
-
-
Otu, H.H.1
Sayood, K.2
-
24
-
-
0042332298
-
Fine and wilf words for any periods
-
R. Tijdeman and L.Zamboni. Fine and Wilf words for any periods. Indag. Math., 14(1):135-147, 2003.
-
(2003)
Indag. Math.
, vol.14
, Issue.1
, pp. 135-147
-
-
Tijdeman, R.1
Zamboni, L.2
-
25
-
-
0037342499
-
Alignment-free sequence comparison - A review
-
S. Vinga and J. Almeida. Alignment-free sequence comparison - a review. Bioinformatics, 19(4):513-523, 2003.
-
(2003)
Bioinformatics
, vol.19
, Issue.4
, pp. 513-523
-
-
Vinga, S.1
Almeida, J.2
|