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Volumn 3666 LNCS, Issue , 2005, Pages 433-440

Probing the applicability of polarizable force-field molecular dynamics for parallel architectures: A comparison of digital MPI with LAM-MPI and MPICH2

Author keywords

LAM MPI; Molecular Dynamics; MPI; MPICH2; Polarizable Force Fields

Indexed keywords

BIOMEDICAL ENGINEERING; COMPUTER ARCHITECTURE; COMPUTER NETWORKS; COMPUTER SIMULATION; INTERFACES (COMPUTER); PARALLEL PROCESSING SYSTEMS;

EID: 33646149994     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/11557265_55     Document Type: Conference Paper
Times cited : (1)

References (6)
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  • 2
    • 0002098417 scopus 로고    scopus 로고
    • The development/application of a 'minimalist' organic/biochemical molecular mechanic force field using a combination of ab initio calculations and experimental data
    • Computer Simulation of Biomolecular Systems, Eds. van Gunsteren, W.F., Weiner, P.K., Wilkinson, A.J., The Netherlands
    • Kollman, P., Dixon, R., Cornell, W., Fox, T., Chipot, C., Pohorille, A.; The Development/Application of a 'Minimalist' Organic/Biochemical Molecular Mechanic Force Field using a Combination of ab Initio Calculations and Experimental Data, in Computer Simulation of Biomolecular Systems, Eds. van Gunsteren, W.F., Weiner, P.K., Wilkinson, A.J. 3 Escom, The Netherlands, (1997) 83-96
    • (1997) Escom , vol.3 , pp. 83-96
    • Kollman, P.1    Dixon, R.2    Cornell, W.3    Fox, T.4    Chipot, C.5    Pohorille, A.6
  • 3
    • 0037899660 scopus 로고    scopus 로고
    • Polarizable atomic multipole water model for molecular mechanics simulation
    • Ren, P., Ponder, J.W.: Polarizable Atomic Multipole Water Model for Molecular Mechanics Simulation. J. Phys. Chem. B 107 (2003) 5933-5947
    • (2003) J. Phys. Chem. B , vol.107 , pp. 5933-5947
    • Ren, P.1    Ponder, J.W.2
  • 4
    • 0242443693 scopus 로고    scopus 로고
    • Force fields for protein simulation
    • Ponder, J.W., Case D.A: Force Fields for Protein Simulation. Adv. Prot. Chem. 66 (2003) 27-85
    • (2003) Adv. Prot. Chem. , vol.66 , pp. 27-85
    • Ponder, J.W.1    Case, D.A.2
  • 6
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    • version 4.2
    • Ponder, J.W.: http://dasher.wustl.edu/tinker/ (2005) version 4.2
    • (2005)
    • Ponder, J.W.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.