The kinetics of analyte capture on nanoscale sensors

Biophysical Journal

Volumn 90, Issue 5, 2006, Pages 1842-1852

  Solomon, J E ^a   Paul, M R ^b  

^a CALIFORNIA INSTITUTE OF TECHNOLOGY   (United States)

^b State University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

LIGAND; BIOPOLYMER;

ARTICLE; BINDING AFFINITY; CONCENTRATION (PARAMETERS); CROSS LINKING; DEVICE; KINETICS; MEASUREMENT; MOLECULE; SENSITIVITY ANALYSIS; SENSOR; CHEMICAL MODEL; CHEMISTRY; COMPUTER AIDED DESIGN; COMPUTER SIMULATION; EQUIPMENT; EQUIPMENT DESIGN; EVALUATION; GENETIC PROCEDURES; IMMUNOASSAY; INSTRUMENTATION; METHODOLOGY; NANOTECHNOLOGY; PROTEIN ANALYSIS; REPRODUCIBILITY; SENSITIVITY AND SPECIFICITY; TRANSDUCER;

BIOPOLYMERS; BIOSENSING TECHNIQUES; COMPUTER SIMULATION; COMPUTER-AIDED DESIGN; EQUIPMENT DESIGN; EQUIPMENT FAILURE ANALYSIS; IMMUNOASSAY; KINETICS; MODELS, CHEMICAL; NANOTECHNOLOGY; PROTEIN INTERACTION MAPPING; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; TRANSDUCERS;

EID: 33646128960     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1529/biophysj.105.067835     Document Type: Article

References (20)

1. Roukes, M., S. Fraser, M. Cross, and J. Solomon. 2000. U.S. Patent App. No. 60/224:109.
2. Ekinci, K. L., and M. L. Roukes. 2005. Nanoelectrical systems. Rev. Sci. Instrum. 76:1-12.
3. Paul, M. R., and M. C. Cross. 2004. Stochastic dynamics of nanoscale mechanical oscillators immersed in a viscous fluid. Phys. Rev. Lett. 92:235501-1-235501-4.
4. Perelson, A. S., and C. DeLisi. 1980. Receptor clustering on a cell surface. I. Theory of receptor cross-linking by ligands bearing two chemically identical functional groups. Math. Biosci. 48:71-110.
5. Perelson, A. S. 1980. Receptor clustering on a cell surface. II. Theory of cross-linking by ligands bearing two chemically distinct functional groups. Math. Biosci. 49:87-110.
6. Lauffenburger, D. A., and J. J. Linderman. 1993. Receptors. Oxford University Press, New York.
7. Adam, G., and M. Delbruck. 1968. Structural Chemistry and Molecular Biology. A. Rich and N. Davidson. Freeman, San Francisco, CA.
8. Lagerholm, B. C., and N. L. Thompson. 1998. Theory for ligand rebinding at cell membrane surfaces. Biophys. J. 74:1215-1228.
9. Geurts, B. J. 1989. Diffusion-limited immunochemical sensing. Bull. Math. Biol. 51:359-379.
10. Berg, O. G. 1978. On diffusion-controlled dissociation. Chem. Phys. 31:47-57.
11. Goldstein, B., and M. Dembo. 1995. Approximating the effects of diffusion on reversible reactions at the cell surface: ligand-receptor kinetics. Biophys. J. 68:1222-1230.
12. Berg, O. G. 1985. Orientation constraints in diffusion-limited macromolecular associations: the role of surface diffusion as rate-enhancing mechanism. Biophys. J. 47:1-15.
13. Pozrikidis, C. 1997. Introduction to Theoretical and Computational Fluid Dynamics. Oxford University Press, New York.
14. Edwards, D. A. 2000. Surface reaction near a stagnation point. Studies Appl. Math. 105:1-29.
15. Milne-Thomson, L. M. 1996. Theoretical Hydrodynamics, Ch. 23. Dover Publications, Mineola, NY.
16. Russel, W. B., D. A. Saville, and W. R. Schowalter. 1999. Colloidal Dispersions. Cambridge University Press, Cambridge, UK.
17. Durig, U., H. R. Steinauer, and N. Blanc. 1997. Dynamic force microscopy by means of the phase-controlled oscillator method. J. Appl. Phys. 82:3641-3651.
18. Tamayo, J., A. D. L. Humphris, R. J. Owen, and M. J. Miles. 2001. High-Q dynamic force microscopy in liquid and its application to living cells. Biophys. J. 81:526-537.
19. Gillespie, D. T. 1976. A general method for numerically simulation the stochastic time evolution of coupled chemical reactions. J. Comput. Phys. 22:403-434.
20. Gillespie, D. T. 1977. Exact stochastic simulation of coupled chemical reactions. J. Phys. Chem. 81:2340-2361.