MiniX-STR multiplex system population study in Japan and application to degraded DNA analysis

International Journal of Legal Medicine

Volumn 120, Issue 3, 2006, Pages 174-181

  Asamura, H ^a   Sakai, H ^a   Kobayashi, K ^a   Ota, M ^a   Fukushima, H ^a  

^a SHINSHU UNIVERSITY SCHOOL OF MEDICINE   (Japan)

Author keywords

Degraded DNA; Multiplex systems; Short tandem repeat (STR); Smaller amplicon lengths; X chromosome

Indexed keywords

DNA; PRIMER DNA;

ADULT; AMPLICON; ANALYTIC METHOD; ARTICLE; BLOOD ANALYSIS; BLOOD SAMPLING; CONTROLLED STUDY; DNA DEGRADATION; DNA DETERMINATION; EVALUATION; FEMALE; GENE AMPLIFICATION; GENE LOCUS; HUMAN; JAPAN; MAJOR CLINICAL STUDY; MALE; POLYMERASE CHAIN REACTION; POPULATION RESEARCH; PRIORITY JOURNAL; SHORT TANDEM REPEAT; X CHROMOSOME;

ASIAN CONTINENTAL ANCESTRY GROUP; CHROMOSOMES, HUMAN, X; DNA DEGRADATION, NECROTIC; DNA FINGERPRINTING; DNA PRIMERS; FEMALE; GENE FREQUENCY; GENETICS, POPULATION; HUMANS; JAPAN; MALE; MINISATELLITE REPEATS; POLYMERASE CHAIN REACTION;

EID: 33645829610     PISSN: 09379827     EISSN: 14371596     Source Type: Journal    
DOI: 10.1007/s00414-005-0074-6     Document Type: Article

References (24)

1. Kinjhodzic R, Kubat M, Skavic J (2004) Bosnian population data for the 15 STR loci in the Power Plex 16 kit. Int J Legal Med 118:119-121
2. Veselinovic I, Kubat M, Furac I, Skavic J, Martinovic Klaric I, Tasic M (2004) Allele frequencies of the 15 AmpflSTR Identifiler loci in the population of Vojvodina Province, Serbia and Montenegro. Int J Legal Med 118:184-186
3. Kwak KD, Jin HJ, Shin DJ et al (2005) Y-chiromosomal STR haplotypes and their applications to forensic and population studies in east Asia. Int J Legal Med 119:195-201
4. Berger B, Lindinger A, Niederstatter H, Grubwieser P, Parson W (2005) Y-STR typing of an Austrian population sample using a 17-loci multiplex PCR assay. Int J Legal Med 119:241-246
5. Hering S, Kuhlisch E, Szibor R (2001) Development of the X-linked tetrameric microsatellite marker HumDXS6789 for forensic purposes. Forensic Sci Int 119:42-46
6. Edelmann J, Hering S, Michael M et al (2001) 16 X-chromosome STR loci frequency data from a German population. Forensic Sci Int 124:215-218
7. Edelmann J, Szibor R (2001) DXS101: a highly polymorphic X-linked STR. Int J Legal Med 114:301-304
8. Edelmann J, Deichsel D, Hering S, Plate I, Szibor R (2002) Sequence variation and allele nomenclature for the X-linked STRs DXS9895, DXS8378, DXS7132, DXS6800, DXS7133, GATA172D05, DXS7423 and DXS8377. Forensic Sci Int 129:99-103
9. Edelmann J, Hering S, Kuhlisch E, Szibor R (2002) Validation of the STR DXS7424 and the linkage situation on the X-chromosome. Forensic Sci Int 125:217-222
10. Szibor R, Krawczak M, Hering S, Edelmann J, Kuhlisch E, Krause D (2003) Use of X-linked markers for forensic purposes. Int J Legal Med 117:67-74
11. Edelmann J, Szibor R (2003) The X-linked STRs DXS7130 and DXS6803. Forensic Sci Int 136:73-75
12. Turrina S, De Leo D (2003) Population data of three X-chromosomal STRs: DXS7132, DXS7133 and GATA172D05 in North Italy. J Forensic Sci 48:1428-1429
13. Chen MY, Pu CE (2004) Population data on the X chromosome short tandem repeat loci DXS10011, DXS101, DXS6789, DXS7132, DXS8377, and DXS9895 in Taiwan. Forensic Sci Int 146:65-67
14. Hering S, Brundirs N, Kuhlisch E et al (2004) DXS10011: studies on structure, allele distribution in three populations and genetic linkage to further q-telomeric chromosome X markers. Int J Legal Med 118:313-319
15. Shin SH, Yu JS, Park SW, Min GS, Chung KW (2005) Genetic analysis of 18 X-linked short tandem repeat markers in Korean population. Forensic Sci Int 147:35-41
16. Hellmann A, Rohleder U, Schmitter H, Witting M (2001) STR typing of human telogen hairs - a new approach. Int J Legal Med 114:269-273
17. Wiegand P, Kleiber M (2001) Less is more - length reduction of STR amplicons using redesigned primers. Int J Legal Med 114:285-287
18. Tsukada K, Takayanagi K, Asamura H, Ota M, Fukushima H (2002) Multiplex short tandem repeat typing in degraded samples using newly designed primers for the TH01, TPOX, CSF1PO, and vWA loci. Leg Med 4:239-245
19. Butler JM, Shen Y, McCord BR (2003) The development of reduced size STR amplicons as tools for analysis of degraded DNA. J Forensic Sci 48:1054-1064
20. Coble MD, Butler JM (2005) Characterization of new miniSTR loci to aid analysis of degraded DNA. J Forensic Sci 50:43-53
21. Asamura H, Uchida R, Takayanagi K, Ota M, Fukushima H (2005) Allele frequencies of the six miniSTR loci in a population from Japan. Int J Legal Med (in press)
22. Botstein D, White RI, Skolnich M, Davis RW (1980) Construction of a genetic linkage map in man using restriction fragment length polymorphisms. Am J Hum Genet 32:314-331
23. Guo SW, Thompson EA (1992) Performing the exact test of Hardy-Weinberg proportion for multiple alleles. Biometrics 48:361-372
24. Desmarais D, Zhong Y, Chakraborty R, Perreault C, Busque L (1998) Development of a highly polymorphic STR marker for identity testing purposes at the human androgen receptor gene (HUMARA). J Forensic Sci 43:1046-1049