The mitochondrial compartment

Journal of Experimental Botany

Volumn 57, Issue 6, 2006, Pages 1225-1243

  Logan, David C ^a  

^a UNIVERSITY OF ST ANDREWS   (United Kingdom)

Author keywords

Cytoskeleton; Discontinuous whole; Division; Dynamics; Fusion; Mitochondria; Mitochondrial genome; Morphology; Mutants; Ultrastructure

Indexed keywords

CELL CULTURE; DNA; ELECTRON TRANSITIONS; GENES; PLANT CELL CULTURE; SYNTHESIS (CHEMICAL);

CYTOSKELETON; MITOCHONDRIA; MITOCHONDRIAL GENOME;

BIOLOGICAL MEMBRANES;

MITOCHONDRIAL DNA; PLANT DNA; REACTIVE OXYGEN METABOLITE;

AGING; APOPTOSIS; CELL COMPARTMENTALIZATION; GENETICS; GLYCOLYSIS; MITOCHONDRIAL GENE; MITOCHONDRIAL MEMBRANE; MITOCHONDRION; MOVEMENT (PHYSIOLOGY); PHYSIOLOGY; PLANT; PLANT PHYSIOLOGY; REVIEW; ULTRASTRUCTURE;

AGING; APOPTOSIS; CELL COMPARTMENTATION; DNA, MITOCHONDRIAL; DNA, PLANT; GENES, MITOCHONDRIAL; GLYCOLYSIS; MITOCHONDRIA; MITOCHONDRIAL MEMBRANES; MOVEMENT; PLANT PHYSIOLOGY; PLANTS; REACTIVE OXYGEN SPECIES;

EMBRYOPHYTA;

EID: 33645745752     PISSN: 00220957     EISSN: 14602431     Source Type: Journal    
DOI: 10.1093/jxb/erj151     Document Type: Review

References (195)

1. Abdelnoor RV, Yule R, Elo A, Christensen AC, Meyer-Gauen G, Mackenzie SA. 2003. Substoichiometric shifting in the plant mitochondrial genome is influenced by a gene homologous to MutS. Proceedings of the National Academy of Sciences, USA 100, 5968-5973.
2. Akazawa TB, Beevers H. 1956. Mitochondria in the endosperm of the germinating castor bean. A developmental study. Biochemical Journal 67, 115-118.
3. Allen JF. 1996. Separate sexes and the mitochondrial theory of ageing. Journal of Theoretical Biology 180, 135-140.
4. Amutha B, Gordon DM, Gu Y, Pain D. 2004. A novel role of Mgm1p, a dynamin-related GTPase, in ATP sythase assembly and cristae formation/ maintenance. Biochemistry Journal 381, 19-23.
5. Arimura S, Aida GP, Fujimoto M, Nakazono M, Tsutsumi N. 2004. Arabidopsis dynamin-like protein 2a (ADL2a), like ADL2b, is involved in plant mitochondrial division. Plant and Cell Physiology 45, 236-242.
6. Arimura S, Tsutsumi N. 2002. A dynamin-like protein (ADL2b), rather than FtsZ, is involved in Arabidopsis mitochondrial division. Proceedings of the National Academy of Sciences, USA 99, 5727-5731.
7. Arpagaus S, Rawyler A, Braendle R. 2002. Occurrence and characteristics of the mitochondrial permeability transition in plants. Journal of Biological Chemistry 277, 1780-1787.
8. Backert S, Dorfel P, Borner T. 1995. Investigation of plant organellar DNAs by pulsed-field gel-electrophoresis. Current Genetics 28, 390-399.
9. Baek D, Nam J, Koo YD, et al. 2004. Bax-induced cell death of Arabidopsis is meditated through reactive oxygen-dependent and -independent processes. Plant Molecular Biology 56, 15-27.
10. Balaban RS, Nemoto S, Finkel T. 2005. Mitochondria, oxidants, and aging. Cell 120, 483-495.
11. Balk J, Leaver CJ, McCabe PF. 1999. Translocation of cytochrome c from the mitochondria to the cytosol occurs during heat-induced programmed cell death in cucumber plants. FEBS Letters 463, 151-154.
12. Barni S, Sciola L, Spano A, Pippia P. 1996. Static cytofluorometry and fluorescence morphology of mitochondria and DNA in proliferating fibroblasts. Biotechnic and Histochemistry 71, 66-70.
13. Barr CM, Neiman M, Taylor DR. 2005. Inheritance and recombination of mitochondrial genomes in plants, fungi and animals. New Phytologist 168, 39-50.
14. Belliard G, Vedel F, Pelletier G. 1979. Mitochondrial recombination in cytoplasmic hybrids of Nicotiana tabacum by protoplast fusion. Nature 281, 401-403.
15. Bendich AJ. 1993. Reaching for the ring: the study of mitochondrial genome structure. Current Genetics 24, 279-290.
16. Bendich AJ. 1996. Structural analysis of mitochondrial DNA molecules from fungi and plants using moving pictures and pulsed-field gel electrophoresis. Journal of Molecular Biology 255, 564-588.
17. Bereiter-Hahn J, Voth M. 1983. Metabolic control of shape and structure of mitochondria in situ. Biology of the Cell 47, 309-322.
18. Bereiter-Hahn J, Voth M. 1994. Dynamics of mitochondria in living cells: shape changes, dislocations, fusion, and fission of mitochondria. Microscopy Research and Technique 27, 198-219.
19. Bleazard W, McCaffery JM, King EJ, Bale S, Mozdy A, Tieu Q, Nunnari J, Shaw JM. 1999. The dynamin-related GTPase Dnm1 regulates mitochondrial fission in yeast. Nature Cell Biology 1, 298-304.
20. Bowsher CG, Tobin AK. 2001. Compartmentation of metabolism within mitochondria and plastids. Journal of Experimental Botany 52, 513-527.
21. Boyle GM, Roucou X, Nagley P, Devenish RJ, Prescott M. 1999. Identification of subunit g of yeast mitochondrial F1F0-ATP synthase, a protein required for maximal activity of cytochrome c oxidase. European Journal of Biochemistry 262, 315-323.
22. Breidenbach RW, Castelfranco P, Criddle RS. 1967. Biogenesis of mitochondria in germinating pea root cotyledons. II. Changes in cytochrome and mitochondrial DNA. Plant Physiology 42, 1035-1041.
23. Cerveny KL, McCaffery JM, Jensen RE. 2001. Division of mitochondria requires a novel DNM1-interacting protein, Net2p. Molecular Biology of the Cell 12, 309-321.
24. Chance B, Sies H, Boveris A. 1979. Hydroperoxide metabolism in mammalian organs. Physiological Reviews 59, 527-605.
25. Collinson IR, Runswick MJ, Buchanan SK, Fearnley IM, Skehel JM, Vanraaij MJ, Griffiths DE, Walker JE. 1994. F-0 membrane domain of ATP synthase from bovine heart-mitochondria: purification, subunit composition, and reconstitution with F1-ATPase. Biochemistry 33, 7971-7978.
26. Curtis MJ, Wolpert TJ. 2002. The oat mitochondrial permeability transition and its implication in victorin binding and induced cell death. The Plant Journal 29, 295-312.
27. Daems WT, Wisse E. 1966. Shape and attachment of the cristae mitochondriales in mouse hepatic cell mitochondria. Journal of Ultrastructural Research 16, 123-140.
28. Dai H, Lo YS, Jane WN, Lee LW, Chiang KS. 1998. Population heterogeneity of higher-plant mitochondria in structure and function. European Journal of Cell Biology 75, 198-209.
29. Damke H, Baba T, van der Bliek AM, Schmid SL. 1995. Clathrin-independent pinocytosis is induced in cells overexpressing a temperature-sensitive mutant of dynamin. Journal of Cell Biology 131, 69-80.
30. Damke H, Baba T, Warnock DE, Schmid SL. 1994. Induction of mutant dynamin specifically blocks endocytic coated vesicle formation. Journal of Cell Biology 127, 915-934.
31. Dekker PJT, Martin F, Maarse AC, Bomer U, Muller H, Guiard B, Meijer M, Rassow J, Pfanner N. 1997. The Tim core complex defines the number of mitochondrial translocation contact sites and can hold arrested preproteins in the absence of matrix Hsp70-Tim44. EMBO Journal 16, 5408-5419.
32. Douce R, Neuburger M. 1999. Biochemical dissection of photorespiration. Current Opinion in Plant Biology 2, 214-222.
33. Duby G, Boutry M. 2002. Mitochondrial protein import machinery and targeting information. Plant Science 162, 477-490.
34. Dufour E, Larsson NG. 2004. Understanding aging: revealing order out of chaos. Biochimica et Biophysica Acta, Bioenergetics 1658, 122-132.
35. Ehrenshaft M, Brambl R. 1990. Respiration and mitochondrial biogenesis in germinating embryos of maize. Plant Physiology 93, 295-304.
36. Elthon TE, Nickels RL, Mcintosh L. 1989. Monoclonal-antibodies to the alternative oxidase of higher-plant mitochondria. Plant Physiology 89, 1311-1317.
37. Ernster L. 1994. The merger of bioenergetics and molecular biology. Biochemical Society Transactions 22, 253-265.
38. Esser K, Tursun B, Ingenhoven M, Michaelis G, Pratje E. 2002. A novel two-step mechanism for removal of a mitochondrial signal sequence involves the mAAA complex and the putative rhomboid protease Pcp1. Journal of Molecular Biology 323, 835-843.
39. Fekkes P, Shepard KA, Yaffe MP. 2000. Gag3p, an outer membrane protein required for fission of mitochondrial tubules. Journal of Cell Biology 151, 333-340.
40. - mutants of Dictyostelium. Journal of Muscle Research and Cell Motility 23, 829-838.
41. Fields SD, Conrad MN, Clarke M. 1998. The S. cerevisiae CLU1 and D. discoideum cluA genes are functional homologues that influence mitochondrial morphology and distribution. Journal of Cell Science 111, 1717-1727.
42. Foissner I. 2004. Microfilaments and microtubules control the shape, motility, and subcellular distribution of cortical mitochondria in characean internodal cells. Protoplasma 224, 145-157.
43. Forte M, Bernardi P. 2005. Genetic dissection of the permeability transition pore. Journal of Bioenergetics and Biomembranes 37, 121-128.
44. Foyer CH, Noctor G. 2003. Redox sensing and signalling associated with reactive oxygen in chloroplasts, peroxisomes and mitochondria. Physiologia Plantarum 119, 355-364.
45. Frank S, Gaume B, Bergmann-Leitner ES, Leitner WW, Robert EG, Catez F, Smith CL, Youle RJ. 2001. The role of dynamin-related protein 1, a mediator of mitochondrial fission, in apoptosis. Developmental Cell 1, 515-525.
46. Frey TG, Renken CW, Perkins GA. 2002. Insight into mitochondrial structure and function from electron tomography. Biochimica et Biophysica Acta 1555, 196-203.
47. Giege P, Heazlewood JL, Roessner-Tunali U, Millar AH, Fernie AR, Leaver CJ, Sweetlove LJ. 2003. Enzymes of glycolysis are functionally associated with the mitochondrion in Arabidopsis cells. The Plant Cell 15, 2140-2151.
48. Gilkerson RW, Margineantu DH, Capaldi RA, Selker JML. 2000. Mitochondrial DNA depletion causes morphological changes in the mitochondrial reticulum of cultured human cells. FEBS Letters 474, 1-4.
49. Gilkerson RW, Selker JML, Capaldi RA. 2003. The cristal membrane of mitochondria is the principal site of oxidative phosphorylation. FEBS Letters 546, 355-358.
50. Gray MW, Burger G, Lang BF. 1999. Mitochondrial evolution. Science 283, 1476-1481.
51. Green DR, Kroemer G. 2004. The pathophysiology of mitochondrial cell death. Science 305, 626-629.
52. Griffin EE, Graumann J, Chan DC. 2005. The WD40 protein Caf4p is a component of the mitochondrial fission machinery and recruits Dnm1p to mitochondria. Journal of Cell Biology 170, 237-248.
53. Gu XJ, Verma DPS. 1996. Phragmoplastin, a dynamin-like protein associated with cell plate formation in plants. EMBO Journal 15, 695-704.
54. Hackenbrock CR. 1968. Chemical and physical fixation of isolated mitochondria in low-energy and high-energy states. Proceedings of the National Academy of Sciences, USA 61, 598-605.
55. Hales KG, Fuller MT. 1996. A novel transmembrane GTPase is required for developmentally regulated mitochondrial fusion during Drosophila spermatogenesis. Molecular Biology of the Cell 7, 3579-3579.
56. Hales KG, Fuller MT. 1997. Developmentally regulated mitochondrial fusion mediated by a conserved, novel, predicted GTPase. Cell 90, 121-129.
57. Halliwell B, Gutteridge JMC. 1999. Free radicals in biology and medicine. Oxford: Oxford University Press.
58. Herlan M, Vogel F, Bornhovd C, Neupert W, Reichert AS. 2003. Processing of Mgm1 by the rhomboid-type protease Pcp1 is required for maintenance of mitochondrial morphology and of mitochondrial DNA. Journal of Biological Chemistry 278, 27781-27788.
59. Hermann GJ, King EJ, Shaw JM. 1997. The yeast gene, MDM20, is necessary for mitochondrial inheritance and organization of the actin cytoskeleton. Journal of Cell Biology 137, 141-153.
60. Hermann GJ, Thatcher JW, Mills JP, Hales KG, Fuller MT, Nunnari J, Shaw JM. 1998. Mitochondrial fusion in yeast requires the transmembrane GTPase Fzo1p. Journal of Cell Biology 143, 359-373.
61. Herskovits JS, Burgess CC, Obar RA, Vallee RB. 1993. Effects of mutant rat dynamin on endocytosis. Journal of Cell Biology 122, 565-578.
62. Higuti T, Kuroiwa K, Kawamura Y, Morimoto K, Tsujita H. 1993. Molecular cloning and sequence of cDNAs for the import precursors of oligomycin sensitivity conferring protein, ATPase inhibitor protein, and subunit c of H(+)-ATP synthase in rat mitochondria. Biochimica et Biophysica Acta 1172, 311-314.
63. Hinshaw JE, Schmid SL. 1995. Dynamin self-assembles into rings suggesting a mechanism for coated vesicle budding. Nature 374, 190-192.
64. Hiraoka T, Hirai K. 1992. Platinum-diaminobenzidine reaction and its contribution to the quantitation of cytochrome oxidase activity. Journal of Electron Microscopy 41, 127-129.
65. Hong Z, Bednarek SY, Blumwald E, et al. 2003. A unified nomenclature for Arabidopsis dynamin-related large GTPases based on homology and possible functions. Plant Molecular Biology 53, 261-265.
66. Hussey PJ. 2004. The plant cytoskeleton in cell differentiation and development. Oxford: Blackwell.
67. Janska H, Mackenzie Sa. 1993. Unusual mitochondrial genome organization in cytoplasmic male-sterile common bean and the nature of cytoplasmic reversion to fertility. Genetics 135, 869-879.
68. Janska H, Sarria R, Woloszynska M, Arrieta-Montiel M, Mackenzie SA. 1998. Stoichiometric shifts in the common bean mitochondrial genome leading to male sterility and spontaneous reversion to fertility. The Plant Cell 10, 1163-1180.
69. Jin JB, Bae HJ, Kim SJ, Jin YH, Goh CH, Kim DH, Lee YJ, Tse YC, Jiang LW, Hwang IW. 2003. The arabidopsis dynamin-like proteins ADL1C and ADL1E play a critical role in mitochondrial morphogenesis. The Plant Cell 15, 2357-2369.
70. Jones A. 2000. Does the plant mitochondrion integrate cellular stress and regulate programmed cell death? Trends in Plant Science 5, 225-230.
71. Karbowski M, Lee YJ, Gaume B, Jeong SY, Frank S, Nechushtan A, Santel A, Fuller M, Smith CL, Youle RJ. 2002. Spatial and temporal association of Bax with mitochondrial fission sites, Drp1, and Mfn2 during apoptosis. Journal of Cell Biology 159, 931-938.
72. Karbowski M, Spodnik JH, Teranishi M, Wozniak M, Nishizawa Y, Usukura J, Wakabayashi T. 2001. Opposite effects of microtubule-stabilizing and microtubule-destabilizing drugs on biogenesis of mitochondria in mammalian cells. Journal of Cell Science 114, 281-291.
73. Karbowski M, Youle RJ. 2003. Dynamics of mitochondrial morphology in healthy cells and during apoptosis. Cell Death and Differentiation 10, 870-880.
74. Kay CJ, Ericson I, Gardestrom P, Palmer JM, Moller IM. 1985. Generation and purification of submitochondrial particles of different polarities from plant mitochondria. FEBS Letters 193, 169-174.
75. Kellems RE, Allison VF, Butow Ra. 1975. Cytoplasmic type-80s ribosomes associated with yeast mitochondria. 4. Attachment of ribosomes to outer membrane of isolated-mitochondria. Journal of Cell Biology 65, 1-14.
76. Khodjakov A, Lizunova EM, Minin AA, Koonce MP, Gyoeva FK. 1998. A specific light chain of kinesin associates with mitochondria in cultured cells. Molecular Biology of the Cell 9, 333-343.
77. Korshunov SS, Skulachev VP, Starkov AA. 1997. High protonic potential actuates a mechanism of production of reactive oxygen species in mitochondria. FEBS Letters 416, 15-18.
78. Kowaltowski AJ, Costa ADT, Vercesi AE. 1998. Activation of the potato plant uncoupling mitochondrial protein inhibits reactive oxygen species generation by the respiratory chain. FEBS Letters 425, 213-216.
79. Krause M, Durner J. 2004. Harpin inactivates mitochondria in Arabidopsis suspension cells. Molecular Plant-Microbe Interactions 17, 131-139.
80. Lea PJ, Temkin RJ, Freeman KB, Mitchell GA, Robinson BH. 1994. Variations in mitochondrial ultrastructure and dynamics observed by high-resolution scanning electron-microscopy (HRSEM). Microscopy Research and Technique 27, 269-277.
81. Leaver CJ, Hack E, Forde BG. 1983. Protein synthesis by isolated plant mitochondria. Methods in Enzymology 97, 476-484.
82. Lee YJ, Jeong SY, Karbowski M, Smith CL, Youle RJ. 2004. Roles of the mammalian mitochondrial fission and fusion mediators Fis1, Drp1, and Opa1 in apoptosis. Molecular Biology of the Cell 15, 5001-5011.
83. Liu Y, Cui H, Zhang Q, Sodmergen. 2004. Divergent potentials for cytoplasmic inheritance within the genus Syringa. A new trait associated with speciogenesis. Plant Physiology 136, 2762-2770.
84. Lodish H, Berk A, Matsudaira P, Baltimore D, Zipursky L, Darnell J. 1995. Molecular cell biology, 3rd edn. New York: Scientific American Books.
85. Logan DC. 2003. Mitochondrial dynamics. New Phytologist 160, 463-478.
86. Logan DC, Knight MR. 2003. Mitochondrial and cytosolic calcium dynamics are differentially regulated in plants. Plant Physiology 133, 21-24.
87. Logan DC, Leaver CJ. 2000. Mitochondria-targeted GFP highlights the heterogeneity of mitochondrial shape, size and movement within living plant cells. Journal of Experimental Botany 51, 865-871.
88. Logan DC, Millar AH, Sweetlove LJ, Hill SA, Leaver CJ. 2001. Mitochondrial biogenesis during germination in maize embryos. Plant Physiology 125, 662-672.
89. Logan DC, Scott I, Tobin AK. 2003. The genetic control of plant mitochondrial morphology and dynamics. The Plant Journal 36, 500-509.
90. Logan DC, Scott I, Tobin AK. 2004. ADL2a, like ADL2b, is involved in the control of higher plant mitochondrial morphology. Journal of Experimental Botany 55, 783-785.
91. Lonsdale DM, Brears T, Hodge TP, Melville SE, Rottmann WH. 1988. The plant mitochondrial genome: homologous recombination as a mechanism for generating heterogeneity. Philosophical Transactions of the Royal Society of London, Series B, Biological Sciences 319, 149-163.
92. Mach JM, Castillo AR, Hoogstraten R, Greenberg JT. 2001. The Arabidopsis accelerated cell death gene ACD2 encodes red chlorophyll catabolite reductase and suppresses the spread of disease symptoms. Proceedings of the National Academy of Sciences, USA 98, 771-776.
93. Mackenzie S, McIntosh L. 1999. Higher plant mitochondria. The Plant Cell 11, 571-586.
94. Mandavilli BS, Santos JH, Van Houten B. 2002. Mitochondrial DNA repair and aging. Mutation Research 509, 127-151.
95. Mannella CA. 2006. The relevance of mitochondrial membrane topology to mitochondrial function. Biochimica et Biophysica Acta 1762, 140-147.
96. Mannella CA, Marko M, Buttle K. 1997. Reconsidering mitochondrial structure: new views of an old organelle. Trends in Biochemical Sciences 22, 37-38.
97. Mannella CA, Marko M, Penczek P, Barnard D, Frank J. 1994. The internal compartmentation of rat-liver mitochondria: tomographic study using the high-voltage transmission electron microscope. Microscopy Research and Technique 27, 278-283.
98. Margineantu DH, Brown RM, Brown GK, Marcus AH, Capaldi RA. 2002a. Heterogeneous distribution of pyruvate dehydrogenase in the matrix of mitochondria. Mitochondrion 1, 327-338.
99. Margineantu DH, Cox WG, Sundell L, Sherwood SW, Beechem JA, Capaldi RA. 2002b. Cell cycle dependent morphology changes and associated mitochondrial DNA redistribution in mitochondria of human cell lines. Mitochondrion 1, 425-435.
100. Maxwell DP, Wang Y, McIntosh L. 1999. The alternative oxidase lowers mitochondrial reactive oxygen production in plant cells. Proceedings of the National Academy of Sciences, USA 96, 8271-8276.
101. McQuibban GA, Saurya S, Freeman M. 2003. Mitochondrial membrane remodelling regulated by a conserved rhomboid protease. Nature 423, 537-541.
102. Meeuse BJD, Raskin I. 1988. Sexual reproduction in the arum lily family, with emphasis on thermogenicity. Sexual Plant Reproduction 1, 3-15.
103. Misaka T, Miyashita T, Kubo Y. 2002. Primary structure of a dynamin-related mouse mitochondrial GTPase and its distribution in brain, subcellular localization, and effect on mitochondrial morphology. Journal of Biological Chemistry 277, 15834-15842.
104. Mogensen HL. 1988. Exclusion of male mitochondria and plastids during syngamy in barley as a basis for maternal inheritance. Proceedings of the National Academy of Sciences, USA 85, 2594-2597.
105. Mokranjac D, Popov-Celeketic D, Hell K, Neupert W. 2005. Role of Tim21 in mitochondrial translocation contact sites. Journal of Biological Chemistry 280, 23437-23440.
106. Moller IM, Liden AC, Ericson I, Gardestrom P. 1987. Isolation of submitochondrial particles with different polarities. Methods in Enzymology 148, 442-453.
107. Moller EM. 2001. Plant mitochondria and oxidative stress: electron transport, NADPH turnover, and metabolism of reactive oxygen species. Annual Review of Plant Physiology and Molecular Biology 52, 561-591.
108. Morohashi Y, Bewley JD. 1980a. Development of mitochondrial activities in pea cotyledons: influence of desiccation during and following germination of the axis. Plant Physiology 66, 637-640.
109. Morohashi Y, Bewley JD. 1980b. Development of mitochondrial activities in pea cotyledons during and following germination of the axis. Plant Physiology 66, 70-73.
110. Morohashi Y, Bewley JD, Yeung EC. 1981a. Biogenesis of mitochondria in imbibed peanut cotyledons: influence of the axis. Journal of Experimental Botany 32, 605-613.
111. Morohashi Y, Bewley JD, Yeung EC. 1981b. Biogenesis of mitochondria in imbibed peanut cotyledons. 2. Development of light and heavy mitochondria. Plant Physiology 68, 318-323.
112. Mozdy AD, McCaffery JM, Shaw JM. 2000. Dnm1p GTPase-mediated mitochondrial fission is a multi-step process requiring the novel integral membrane component Fis1p. Journal of Cell Biology 151, 367-380.
113. Munn EA. 1974. The structure of mitochondria. London: Academic Press.
114. Murcha MW, Lister R, Ho AYY, Whelan J. 2003. Identification, expression, and import of components 17 and 23 of the inner mitochondrial membrane translocase from Arabidopsis. Plant Physiology 131, 1737-1747.
115. Murcha MW, Elhafez D, Millar AH, Whelan J. 2005. The C-terminal region of TIM17 links the outer and inner mitochondrial membranes in Arabidopsis and is essential for protein import. Journal of Biological Chemistry 280, 16476-16483.
116. Nagata N, Saito C, Sakai A, Kuroiwa H, Kuroiwa T. 1999a. Decrease in mitochondrial DNA and concurrent increase in plastid DNA in generative cells of Pharbitis nil during pollen development. European Journal of Cell Biology 78, 241-248.
117. Nagata N, Saito C, Sakai A, Kuroiwa H, Kuroiwa T. 1999b. The selective increase or decrease of organellar DNA in generative cells just after pollen mitosis one controls cytoplasmic inheritance. Planta 209, 53-65.
118. Nakada K, Inoue K, Ono T, Isobe K, Ogura A, Goto Y, Nonaka I, Hayashi JI. 2001. Inter-mitochondrial complementation: mitochondria-specific system preventing mice from expression of disease phenotypes by mutant mtDNA. Nature Medicine 7, 934-940.
119. Okamoto K, Shaw JM. 2005. Mitochondrial morphology and dynamics in yeast and multicellular eukaryotes. Annual Review of Genetics 39, 503-536.
120. Oldenburg DJ, Bendich AJ. 2001. Mitochondrial DNA from the liverwort Marchantia polymorpha: circularly permuted linear molecules, head-to-tail concatemers, and a 5′ protein. Journal of Molecular Biology 310, 549-562.
121. Olyslaegers G, Verbelen JP. 1998. Improved staining of F-actin and co-localization of mitochondria in plant cells. Journal of Microscopy 192, 73-77.
122. Ono T, Isobe K, Nakada K, Hayashi JI. 2001. Human cells are protected from mitochondrial dysfunction by complementation of DNA products in fused mitochondria. Nature Genetics 28, 272-275.
123. Otsuga D, Keegan BR, Brisch E, Thatcher JW, Hermann GJ, Bleazard W, Shaw JM. 1998. The dynamin-related GTPase, Dnm1p, controls mitochondrial morphology in yeast. Journal of Cell Biology 143, 333-349.
124. Ozawa T. 1995. Mitochondrial-DNA mutations associated with aging and degenerative diseases. Experimental Gerontology 30, 269-290.
125. Palade G. 1952. The fine structure of mitochondria. Anatomical Record 114, 427-451.
126. Partikian A, Olveczky B, Swaminathan R, Li YX, Verkman AS. 1998. Rapid diffusion of green fluorescent protein in the mitochondrial matrix. Journal of Cell Biology 140, 821-829.
127. Paumard P, Vaillier J, Coulary B, Schaeffer J, Soubannier V, Mueller DM, Brethes D, di Rago JP, Velours J. 2002. The ATP synthase is involved in generating mitochondrial cristae morphology. EMBO Journal 21, 221-230.
128. Perkins G, Renken C, Martone ME, Young SJ, Ellisman M, Frey T. 1997a. Electron tomography of neuronal mitochondria: three-dimensional structure and organization of cristae and membrane contacts. Journal of Structural Biology 119, 260-272.
129. Perkins GA, Frey TG. 2000. Recent structural insight into mitochondria gained by microscopy. Micron 31, 97-111.
130. Perkins GA, Renken CW, Song JY, Frey TG, Young SJ, Lamont S, Martone ME, Lindsey S, Ellisman MH. 1997b. Electron tomography of large, multicomponent biological structures. Journal of Structural Biology 120, 219-227.
131. Perkins GA, Renken CW, van der Klei IJ, Ellisman MH, Neupert W, Frey TG. 2001. Electron tomography of mitochondria after the arrest of protein import associated with Tom19 depletion. European Journal of Cell Biology 80, 139-150.
132. Perkins GA, Song JY, Tarsa L, Deerinck TJ, Ellisman MH, Frey TG. 1998. Electron tomography of mitochondria from brown adipocytes reveals crista junctions. Journal of Bioenergetics and Biomembranes 30, 431-442.
133. Perotti ME, Anderson WA, Swift H. 1983. Quantitative cytochemistry of the diaminobenzidine cytochrome-oxidase reaction product in mitochondria of cardiac muscle and pancreas. Journal of Histochemistry and Cytochemistry 31, 351-365.
134. Pon L, Moll T, Vestweber D, Marshallsay B, Schatz G. 1989. Protein import into mitochondria: ATP-dependent protein translocation activity in a submitochondrial fraction enriched in membrane contact sites and specific proteins. Journal of Cell Biology 109, 2603-2616.
135. Puntarulo S, Galleano M, Sanchez Ra, Boveris A. 1991. Superoxide anion and hydrogen-peroxide metabolism in soybean embryonic axes during germination. Biochimica et Biophysica Acta 1074, 277-283.
136. Rapaport D, Brunner M, Neupert W, Westermann B. 1998. Fzo1p is a mitochondrial outer membrane protein essential for the biogenesis of functional mitochondria in Saccharomyces cerevisiae. Journal of Biological Chemistry 273, 20150-20155.
137. Reddy AS, Day IS. 2001. Kinesins in the Arabidopsis genome: a comparative analysis among eukaryotes. BMC Genomics 2, 2.
138. Robinson JB, Srere PA. 1984. Organization of Krebs tricarboxylic acid cycle enzymes in mitochondria. Journal of Biological Chemistry 260, 10800-10805.
139. Rhoads DM, Mcintosh L. 1992. Salicylic-acid regulation of respiration in higher-plants: alternative oxidase expression. The Plant Cell 4, 1131-1139.
140. Rickwood D, Wilson MT, Darley-Usmar VM. 1987. Isolation and characterization of intact mitochondria. In: Darley-Usmar VM, Rickwood D, Wilson MT, eds. Mitochondria: a practical approach. Oxford: IRL Press, 1-16.
141. 2+ responses. Science 280, 1763-1766.
142. 2+ release: an intimate connection. Trends in Biochemical Sciences 25, 215-221.
143. Saraste M. 1999. Oxidative phosphorylation at the fin de siecle. Science 283, 1488-1493.
144. Schleyer M, Neupert W. 1985. Transport of proteins into mitochondria: translocational intermediates spanning contact sites between outer and inner membranes. Cell 43, 339-350.
145. Schulke N, Sepuri NBV, Gordon DM, Saxena S, Dancis A, Pain D. 1999. A multisubunit complex of outer and inner mitochondrial membrane protein translocases stabilized in vivo by translocation intermediates. Journal of Biological Chemistry 274, 22847-22854.
146. Schwaiger M, Herzog V, Neupert W. 1987. Characterization of translocation contact sites involved in the import of mitochondrial proteins. Journal of Cell Biology 105, 235-246.
147. Scott I, Tobin AK, Logan DC. 2006. BIGYIN, an orthologue of human and yeast FIS1 genes functions in the control of mitochondrial size and number in Arabidopsis thaliana. Journal of Experimental Botany 57, 1275-1280.
148. Senda T, Yoshinaga-Hirabayashi T. 1998. Intermembrane bridges within membrane organelles revealed by quick-freeze deep-etch electron microscopy. Anatomical Record 251, 339-345.
149. Sesaki H, Jensen RE. 1999. Division versus fusion: Dnm1p and Fzo1p antagonistically regulate mitochondrial shape. Journal of Cell Biology 147, 699-706.
150. Sheahan MB, McCurdy DW, Rose RJ. 2005. Mitochondria as a connected population: ensuring continuity of the mitochondrial genome during plant cell dedifferentiation through massive mitochondrial fusion. The Plant Journal 44, 744-755.
151. Sheahan MB, Rose RJ, McCurdy DW. 2004. Organelle inheritance in plant cell division: the actin cytoskeleton is required for unbiased inheritance of chloroplasts, mitochondria and endoplasmic reticulum in dividing protoplasts. The Plant Journal 37, 379-390.
152. Shigenaga MK, Hagen TM, Ames BN. 1994. Oxidative damage and mitochondrial decay in aging. Proceedings of the National Academy of Sciences, USA 91, 10771-10778.
153. Sjostrand FS. 1953. Electron microscopy of mitochondria and cytoplasmic double membranes. Nature 171, 30-31.
154. Skulachev VP. 1996a. Role of uncoupled and non-coupled oxidations in maintenance of safely low levels of oxygen and its one-electron reductants. Quarterly Review of Biophysics 29, 169-202.
155. Skulachev VP. 1996b. Why are mitochondria involved in apoptosis? Permeability transition pores and apoptosis as selective mechanisms to eliminate superoxide-producing mitochondria and cells. FEBS Letters 397, 7-10.
156. Skulachev VP. 1998. Uncoupling: new approaches to an old problem of bioenergetics. Biochimica et Biophysica Acta 1363, 100-124.
157. Skulachev VP. 2000. Mitochondria in the programmed death phenomena; a principle of biology: 'it is better to die than to be wrong'. IUBMB Life 49, 365-373.
158. Skulachev VP. 2001. The programmed death phenomena, aging, and the Samurai law of biology. Experimental Gerontology 36, 995-1024.
159. Skulachev VP. 2002. Programmed death phenomena: from organelle to organism. Annals of the New York Academy of Science 959, 214-237.
160. Skulachev VP, Bakeeva LE, Chernyak BV, et al. 2004. Thread-grain transition of mitochondrial reticulum as a step of mitoptosis and apoptosis. Molecular and Cellular Biochemistry 256/257, 341-358.
161. Small I, Suffolk R, Leaver CJ. 1989. Evolution of plant mitochondrial genomes via substoichiometric intermediates. Cell 58, 69-76.
162. Smirnova E, Shurland DL, Ryazantsev SN, van der Bliek AM. 1998. A human dynamin-related protein controls the distribution of mitochondria. Journal of Cell Biology 143, 351-358.
163. Sodmergen, Zhang Q, Zhang Y, Sakamoto W, Kuroiwa T. 2002. Reduction in amounts of mitochondrial DNA in the sperm cells as a mechanism for maternal inheritance in Hordeum vulgare. Planta 216, 235-44.
164. Solomos T, Malhotra SS, Prasad S, Malhotra SK, Spencer M. 1972. Biochemical and structural changes in mitochondria and other cellular components of pea cotyledons during germination. Canadian Journal of Biochemistry 50, 725-737.
165. Stein JC, Hansen G. 1999. Mannose induces an endonuclease responsible for DNA laddering in plant cells. Plant Physiology 121, 71-80.
166. Stenoien DL, Brady ST. 1997. Immunochemical analysis of kinesin light chain function. Molecular Biology of the Cell 8, 675-689.
167. Stevens BJ. 1977. Variation in number and volume of the mitochondria in yeast according to growth conditions. Biology of the Cell 28, 37-56.
168. Stickens D, Verbelen JP. 1996. Spatial structure of mitochondria and ER denotes changes in cell physiology of cultured tobacco protoplasts. The Plant Journal 9, 85-92.
169. Stojanovski D, Koutsopoulos OS, Okamoto K, Ryan MT. 2004. Levels of human Fis1 at the mitochondrial outer membrane regulate mitochondrial morphology. Journal of Cell Science 117, 1201-1210.
170. Sun YL, Zhao Y, Hong X, Zhai ZH. 1999. Cytochrome c release and caspase activation during menadione-induced apoptosis in plants. FEBS Letters 462, 317-321.
171. Sutovsky P, McCauley TC, Sutovsky M, Day BN. 2003. Early degradation of paternal mitochondria in domestic pig (Sus scrofa) is prevented by selective proteasomal inhibitors lactacystin and MG132. Biology of Reproduction 68, 1793-1800.
172. Sutovsky P, Moreno RD, Ramalho-Santos J, Dominko T, Simerly C, Schatten G. 1999. Ubiquitin tag for sperm mitochondria. Nature 402, 371-372.
173. Sutovsky P, Navara CS, Schatten G. 1996. Fate of the sperm mitochondria, and the incorporation, conversion, and disassembly of the sperm tail structures during bovine fertilization. Biology of Reproduction 55, 1195-1205.
174. Thompson P, Bowsher CG, Tobin AK. 1998. Heterogeneity of mitochondrial protein biogenesis during primary leaf development in barley. Plant Physiology 118, 1089-1099.
175. Thompson WE, Ramalho-Santos J, Sutovsky P. 2003. Ubiquitination of prohibitin in mammalian sperm mitochondria: possible roles in the regulation of mitochondrial inheritance and sperm quality control. Biology of Reproduction 69, 254-260.
176. Tieu Q, Nunnari J. 2000. Mdv1p is a WD repeat protein that interacts with the dynamin- related GTPase, Dnm1p, to trigger mitochondrial division. Journal of Cell Biology 143, 353-365.
177. Tieu Q, Okreglak V, Naylor K, Nunnari J. 2002. The WD repeat protein, Mdv1p, functions as a molecular adaptor by interacting with Dnm1p and Fis1p during mitochondrial fission. Journal of Cell Biology 158, 445-452.
178. Tyler DD. 1992. The mitochondrion in health and disease. New York; Cambridge: VCH.
179. Unseld M, Marienfeld JR, Brandt P, Brennicke A. 1997. The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366 924 nucleotides. Nature Genetics 15, 57-61.
180. van der Bliek AM, Redelmeier TE, Damke H, Tisdale EJ, Meyerowitz EM, Schmid SL. 1993. Mutations in human dynamin block an intermediate stage in coated vesicle formation. Journal of Cell Biology 122, 553-563.
181. Van Gestel K, Kohler RH, Verbelen JP. 2002. Plant mitochondria move on F-actin, but their positioning in the cortical cytoplasm depends on both F-actin and microtubules. Journal of Experimental Botany 53, 659-667.
182. Van Gestel K, Verbelen JP. 2002. Giant mitochondria are a response to low oxygen pressure in cells of tobacco (Nicotiana tabacum L.). Journal of Experimental Botany 53, 1215-1218.
183. Vandecasteele G, Szabadkai G, Rizzuto R. 2001. Mitochondrial calcium homeostasis: mechanisms and molecules. IUBMB Life 52, 213-219.
184. Vanlerberghe GC, McIntosh L. 1997. Alternative oxidase: from gene to function. Annual Review of Plant Physiology and Plant Molecular Biology 48, 703-734.
185. Velot C, Mixon MB, Teige M, Srere PA. 1997. Model of a quinary structure between Krebs TCA cycle enzymes: a model for the metabolon. Biochemistry 36, 14271-14276.
186. Verhey KJ, Meyer D, Deehan R, Blenis J, Schnapp BJ, Rapoport TA, Margolis B. 2001. Cargo of kinesin identified as JIP scaffolding proteins and associated signaling molecules. Journal of Cell Biology 152, 959-970.
187. Walker JE, Lutter R, Dupuis A, Runswick MJ. 1991. Identification of the subunits of F1F0-ATPase from bovine heart-mitochondria. Biochemistry 30, 5369-5378.
188. Wang X. 2001. The expanding role of mitochondria in apoptosis. Genes and Development 15, 2922-2933.
189. Whelan J, Glaser E. 1997. Protein import into plant mitochondria. Plant Molecular Biology 33, 771-789.
190. Wiseman H, Halliwell B. 1996. Damage to DNA by reactive oxygen and nitrogen species: role in inflammatory disease and progression to cancer. Biochemical Journal 313, 17-29.
191. Wong ED, Wagner JA, Gorsich SW, McCaffery JM, Shaw JM, Nunnari J. 2000. The dynamin-related GTPase, Mgm1p, is an intermembrane space protein required for maintenance of fusion competent mitochondria. Journal of Cell Biology 151, 341-352.
192. Yao N, Eisfelder J, Marvin JT, Greenberg JT. 2004. The mitochondrion: an organelle commonly involved in programmed cell death in Arabidopsis thaliana. The Plant Journal 40, 596-610.
193. Yoshinaga K, Arimura SI, Niwa Y, Tsutsumi N, Uchimiya H, Kawai-Yamada M. 2005. Mitochondrial behaviour in the early stages of ROS stress leading to cell death in Arabidopsis thaliana. Annals of Botany 96, 337-342.
194. Youle RJ, Karbowski M. 2005. Mitochondrial fission in apoptosis. Nature Reviews Molecular Cell Biology 6, 657-663.
195. Zhu Q, Hulen D, Liu T, Clarke M. 1997. The cluA- mutant of Dictyostelium identifies a novel class of proteins required for dispersion of mitochondria. Proceedings of the National Academy of Sciences, USA 94, 7308-7313.