Molecular identification and the complete nucleotide sequence of a Tomato yellow leaf curl virus isolate from Turkey

Journal of Plant Pathology

Volumn 88, Issue 1, 2006, Pages 61-66

  Koklu G ^a   Rojas, A ^b,c   Kvarnheden, A ^b  

^a TRAKYA UNIVERSITY   (Turkey)

^b SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

^c Universidad Nacional Agraria   (Nicaragua)

Author keywords

Begomovirus; Geminivirus; Lycopersicon esculentum

Indexed keywords

ALEYRODIDAE; BEGOMOVIRUS; BEMISIA TABACI; GEMINIVIRIDAE; LYCOPERSICON ESCULENTUM; TOMATO YELLOW LEAF CURL VIRUS;

EID: 33645698940     PISSN: 11254653     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (36)

1. Abak K., Yilmaz M.A., Kesici S., 1991. Problème de TYLCV en Turquie et moyens utilisés pour diminuer son effet. Proceeding of Seminar on Resistance to TYLCV, Avignon 1991, pp. 28-30.
2. Ala-Poikela M., Svensson E., Rojas A., Horko T., Paulin L., Valkonen J.P.T., Kvarnheden A., 2005. Genetic diversity and mixed infections of begomoviruses infecting tomato, pepper and cucurbit crops in Nicaragua. Plant Pathology 54: 448-459.
3. Antignus Y., Cohen S., 1994. Complete nucleotide sequence of an infectious clone of a mild isolate of tomato yellow leaf curl virus (TYLCV). Phytopathology 84: 707-712.
4. Ascencio-Ibáñez J.T., Diaz-Plaza R., Méndez-Lozano J., Monsalve-Fonnegra Z.I., Argüello-Astorga G.R., Rivera-Bustamante R.F., 1999. First report of tomato yellow leaf curl geminivirus in Yucatán, México. Plant Disease 83: 1178.
5. Bananej K., Kheyr-Pour A., Hosseini Salekdeh G., Ahoonmanesh A., 2004. Complete nucleotide sequence of Iranian tomato yellow leaf curl virus isolate: further evidence for natural recombination amongst begomoviruses. Archives of Virology 149: 1435-1443.
6. Bird J., Idris A.M., Rogan D., Brown J.K., 2001. Introduction of the exotic Tomato yellow leaf curl virus-Israel in tomato to Puerto Rico. Plant Disease 85: 1028.
7. Cohen S., Antignus Y., 1994. Tomato yellow leaf curl virus, a whitefly-borne geminivirus of tomatoes. Advances in Disease Vector Research 10: 259-288.
8. Cohen S., Harpaz I., 1964. Periodic rather than continual acquisition of a new tomato virus by its vector, the tobacco whitefly (Bemisia tabaci Gennadius). Entomologia Experimentalis et Applicata 7: 155-166.
9. Czosnek H., Laterrot H., 1997. A worldwide survey of tomato yellow leaf curl viruses. Archives of Virology 142: 1391-1406.
10. Delatte H., Holota H., Naze F., Peterschmitt M., Reynaud B., Lett J.M., 2005. The presence of both recombinant and nonrecombinant strains of Tomato yellow leaf curl virus on tomato in Réunion Island. Plant Pathology 54: 262.
11. Dittrich V., Ernst G.H., Ruesch O., Uk S., 1990. Resistance mechanisms in sweetpotato whitefly (Homoptera: Aleyrodidae) populations from Sudan, Turkey, Guatemala and Nicaragua. Journal of Economic Entomology 83: 1665-1670.
12. Fauquet C.M., Sawyer S., Idris A.M., Brown J.K., 2005. Sequence analysis and classification of apparent recombinant begomoviruses infecting tomato in the Nile and Mediterranean Basins. Phytopathology 95: 549-555.
13. Gafni Y., 2003. Tomato yellow leaf curl virus, the intracellular dynamics of a plant DNA virus. Molecular Plant Pathology 4: 9-15.
14. Idris A.M., Brown J.K., 2005. Evidence for interspecific-recombination for three monopartite begomoviral genomes associated with the tomato leaf curl disease from central Sudan. Archives of Virology 150: 1003-1012.
15. Kato K., Onuki M., Fuji S., Hanada K., 1998. The first occurrence of Tomato yellow leaf curl virus in tomato (Lycopersicon esculentum Mill.) in Japan. Annals of the Phytopathological Society of Japan 64: 552-559.
16. Kheyr-Pour A., Bendahmane M., Matzeit V., Accotto G.P., Crespi S., Gronenborn B., 1991. Tomato yellow leaf curl virus from Sardinia is a whitefly-transmitted monopartite geminivirus. Nucleic Acids Research 19: 6763-6769.
17. Monci F., Sánchez-Campos S., Navas-Castillo J., Moriones E., 2002. A natural recombinant between the geminiviruses Tomato yellow leaf curl Sardinia virus and Tomato yellow leaf curl virus exhibits a novel pathogenic phenotype and is becoming prevalent in Spanish populations. Virology 303: 317-326.
18. Morilla G., Janssen D., García-Andrés S., Moriones E., Cuadrado I.M., Bejarano E.R., 2005. Pepper (Capsicum annuum) is a dead-end host for Tomato yellow leaf curl virus. Phytopathology 95: 1089-1097.
19. Moriones E., Navas-Castillo J., 2000. Tomato yellow leaf curl virus, an emerging virus complex causing epidemics worldwide. Virus Research 71: 123-134.
20. Nakhla M.K., Maxwell D.P., Martinez R.T., Carvaeho M.G., Gilbertson R.L., 1994. Widespread occurrence of the Eastern Mediterranean strain of Tomato yellow leaf curl geminivirus in tomatoes in the Dominican Republic. Plant Disease 78: 926.
21. Navas-Castillo J., Sánchez-Campos S., Díaz J.A., Sáez-Alonso E., Moriones E., 1999. Tomato yellow leaf curl virus-Is causes a novel disease of common bean and severe epidemics in tomato in Spain. Plant Disease 83: 29-32.
22. Navas-Castillo J., Sánchez-Campos S., Noris E., Louro D., Accotto G.P., Moriones E., 2000. Natural recombination between Tomato yellow leaf curl virus-Is and Tomato leaf curl virus. Journal of General Virology 81: 2797-2801.
23. Navot N., Ber R., Czosnek H., 1989. Rapid detection of tomato yellow leaf curl virus in squashes of plants and insect vectors. Phytopathology 79: 562-568.
24. Navot N., Pichersky E., Zeidan M., Zamir D., Czosnek H., 1991. Tomato yellow leaf curl virus: A whitefly-transmitted geminivirus with a single genomic component. Virology 185: 151-161.
25. Padidam M., Sawyer S., Fauquet C.M., 1999. Possible emergence of new geminiviruses by frequent recombination. Virology 265: 218-225.
26. Polston J.E., Anderson P.K., 1997. The emergence of whitefly-transmitted geminiviruses in tomato in the Western Hemisphere. Plant Disease 81: 1358-1369.
27. Polston J.E., McGovern R.J., Brown L.G., 1999. Introduction of tomato yellow leaf curl virus in Florida and implications for the spread of this and other geminiviruses of tomato. Plant Disease 83: 984-988.
28. Rochester D.E., DePaulo J.J., Fauquet C.M., Beachy R.N., 1994. Complete nucleotide sequence of the geminivirus tomato yellow leaf curl virus, Thailand isolate. Journal of General Virology 75: 477-485.
29. Rojas A., Kvarnheden A., Marcenaro D., Valkonen, J.P.T., 2005. Sequence characterization of Tomato leaf curl Sinaloa virus and Tomato severe leaf curl virus: Phylogeny of New World begomoviruses and detection of recombination. Archives of Virology 150: 1281-1299.
30. Sanchez-Campos S, Navas-Castillo J., Camero R., Saria C., Díaz J.A., Moriones E., 1999. Displacement of Tomato yellow leaf curl virus (TYLCV)-Sr by TYLCV-Is in tomato epidemics in Spain. Phytopathology 89: 1038-1043.
31. Swofford D.L., 2002. PAUP*. Phylogenetic Analysis Using Parsimony (and other methods). Version 4. Sinauer Associates, Sunderland, Mass, USA.
32. Thompson J.D., Higgins D.G., Gibson T.J., 1994. CLUSTAL W: Improving the sensitivity of the progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22: 4673-4680.
33. Ueda S., Kimura T., Onuki M., Hanada K., Iwanami T., 2004. Three distinct groups of isolates of Tomato yellow leaf curl virus in Japan and construction of an infectious clone. Journal of General Plant Pathology 70: 232-238.
34. Ulusoy M.R., Bayhan E., 2003. A new whitefly species on vegetable fields in the east Mediterranean region of Turkey: silver-leaf whitefly, Bemisia argentifolii Bellows and Perring (Homoptera: Aleyrodidae). Turkiye Entomoloji Dergisi 27: 51-60.
35. Varma A., Malathi V.G., 2003. Emerging geminivirus problems: A serious threat to crop production. Annals of Applied Biology 142: 145-164.
36. Wyatt S.D., Brown J.K., 1996. Detection of subgroup III geminivirus isolates in leaf extracts by degenerate primers and polymerase chain reaction. Phytopathology 86: 1288-1293.