Analysis of genetic relationships among Turkish cultivars and breeding lines of Lens culinatis Mestile using RAPD markers

Genetic Resources and Crop Evolution

Volumn 53, Issue 3, 2006, Pages 507-514

  Yüzbasioǧlu, Ertuǧrul ^a   Özcan, Sebahattin ^b   Açik, Leyla ^c  

^a ERCIYES UNIVERSITY   (Turkey)

^b ANKARA UNIVERSITY   (Turkey)

^c GAZI UNIVERSITY   (Turkey)

Author keywords

Cultivars; Genetic relationships; Lens culinatis Mestile; Lentil; RAPDs

Indexed keywords

GENETIC MARKER;

LENS CULINARIS;

EID: 33645551930     PISSN: 09259864     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10722-004-2030-6     Document Type: Article

References (53)

1. A. Abo-elwafa K. Murai T. Shimada 1995 Intra-and inter-specific variations in Lens revealed by RAPD markers Theor. Appl. Genet. 90 335 340
2. M. Ahmad D.L. [tmp] McNeil A.G. Fautrier K.F. Armstrong A.M. Paterson 1996 Genetic relationships in Lens species and parentage determination of their interspecific hybrids using RAPD markers Theor. Appl. Genet. 92 1091 1098
3. M. Ahmad D.L. Mc Neil R. Sedcole 1997 Phylogenetic relationships in Lens species and their interspecific hybrids as measured by morphological characters Euphytica 94 101 111
4. J.S. Beckmann M. Soller 1986 Restriction fragment length polymorphisms and genetic improvement of agricultural species Euphytica 35 111 124
5. D. Botstein R. White M. Skolnick R.W. Davis 1980 Construction of a genetic linkage map in man using restriction fragment length polymorphisms Am. J. Human Genet. 32 314 331
6. A.H.D. Brown 1978 Isozymeplant population genetic structure and genetic conservation Theor. Appl. Genet. 52 145 157
7. J.A. Couch P.J. Fritz 1990 Isolation of DNA from plants high in polyphenolics Plant Mol. Biol. Rep. 8 8 12
8. W. Erskine S. Chaudhry I.A. Malik A. Sarker B. Sharma M. Tufail M.C. Tyagi 1998 A bottleneck in lentil: widening its genetic base in South Asia Euphytica 101 207 211
9. J. Felsenstein 2002 PHYLIP (Phylogeny Inference Package) version 3.6a3. Distributed by the Author Department of Genome Sciences, University of Washington Seattle
10. N.H.J. Ferguson N. Maxted B.V. Ford-Lloyd L.D. Robertson 1998 Population genetic structure in Lens taxa revealed by isozyme and RAPD analysis Genetic Resour. Crop Evol. 45 549 559
11. M.E. Fernandez A.M. Figueiras C. Benito 2002 The use of ISSR and RAPD markers for detecting DNA polymorphismgenotype identification and genetic diversity among barley cultivars with known origin Theor. Appl. Genet. 104 845 851
12. R. Ford E.C.K. Pang P.W.C. Taylor 1997 Diversity analysis and species identification in Lens using PCR generated markers Euphytica 96 247 255
13. U. Galderisi M. Cipollaro G. Di Bernardo L. De Masi G. Galano A. Cascino 1999 Identification of hazelnut (Corylus avellana) cultivars by RAPD analysis Plant Cell Rep. 18 652 655
14. F.J. Gallego I. Martinez 1997 Method to improve reliability of Random-amplified Polymorphic DNA markers BioTechniques 23 663 664
15. M.Z. Galvan M.B. Aulicino S.G. Medina P.A. Balatti 2001 Genetic diversity among Nortwestern Argentinian cultivars of common bean (Phaseolus vulgaris L.) as revealed by RAPD markers Genetic Resour. Crop Evol. 48 3 251 260
16. S.L. Greene M. Gritsenko G. Vandewark 2004 Relating morphological and RAPD marker variation to collection site environment in wild populations of Red Clover (Trifolium pratense L.) Genetic Resour. Crop Evol. 51 6 643 653
17. M.J. Havey F.J. Muehlbauer 1989 Variability for restriction fragment lengths and phylogenesis in lentil Theor. Appl. Genet. 77 839 843
18. T. Helentjaris M. Slocum S. Wright A. Schaefer J. Nienhuis 1986 Constructions of genetic linkage maps in maize and tomato using restriction fragment length polymorphisms Theor. Appl. Genet. 72 761 769
19. 1 hybrids of corn Theor. Appl. Genet. 85 961 968
20. M. Heun J.P. Murphy 1994 A comparison of RAPD and isozyme analysis for determining the genetic relationships among Avena sterilis L. accessions Theor. Appl. Genet. 87 689 696
21. S.P.S. Khanuja A.K. Shasany M.P. Darokar S. Kumar 1999 Rapid isolation of DNA from dry and fresh samples of plants producing large amount of secondary metabolites and essential oil Plant Mol. Biol. Rep. 17 1 7
22. W.F. Lamboy 1994 Computing genetic similarity coefficients from RAPD data: correcting for the effects of PCR artifacts caused by variation in experimental conditions PCR Meth. Appl. 4 38 43
23. V. Lefebvre B. Goffinet J.C. Chauvet B. Caromel P. Signoret R. Brand A. Palloix 2001 Evaluation of genetic distances between pepper inbred lines for cultivar protection purposes: comparison of AFLP, RAPD and phenotypic data Theor. Appl. Genet. 102 741 750
24. M. Lee 1995 DNA markers and plant breeding programs Adv. Agron. 55 265 343
25. M.S. Mayer P.S. Soltis 1994 Chloroplast DNA phylogeny of Lens (Leguminosae): origin and diversity of the cultivated lentil Theor. Appl. Genet. 87 773 781
26. J. Nienhuis M.K. Slocum D.A. DeVos R. Muren 1993 Genetic similarity among Brassica oleracea L. genotypes as measured by restriction fragment length polymorphisms J. Am. Soc. Hort. Sci. 118 2 298 303
27. R.O. Nodari S.M. Tsai R.L. Gilbertson P. Gepts 1993 Towards an integrated map of common bean 2. Development of an RFLP-based linkage map Theor. Appl. Genet. 85 513 520
28. B.C. Pengelly C.J. Liu 2001 Genetic relationships and variation in the tropical mimosoid legume Desmanthus assessed by random amplified polymorphic DNA Genetic Resour. Crop Evol. 48 1 93 101
29. G.A. Penner A. Bush R. Wise W. Kim L. Domier K. Kasha A. Laroche G. Scoles S.J. Molnar G. Fedak 1993 Reproducibility of random amplified polymorphic DNA (RAPD) analysis among laboratories PCR Meth. Appl. 2 341 345
30. G. Rajaseger H.T.W. Tan I.M. Turner P.P. Kumar 1997 Analysis of genetic diversity among Ixora cultivars (Rubiaceae) using random amplified polymorphic DNA Ann. Bot. 80 355 361
31. R.S. Reiter J.G.K. Williams K.A. Feldman J.A. Rafalski S.V. Tingey P.A. Scolnik 1992 Global and local genome mapping in Arabidopsis thaliana by using recombinant inbreed lines and random amplified polymorphic DNAs Proc. Natl. Acad. Sci. USA 89 1477 1481
32. S.O. Rogers A.J. Bendich 1988 Extraction of DNA from milligram amounts of freshherbarium and mummified plant tissues Plant Mol. Biol. 5 69 76
33. F.J. Rohlf 1992 NTSYS-pc numerical taxonomy and multivariate analysis system version 1.7 Exeter Publications New York
34. V.J. Sant A.G. Patankar N.D. Sarode L.B. Mhase M.N. Sainani H.B. Deshmukh P.K. Ranjekar V.S. Gupta 1999 Potential of DNA markers in detecting divergence and in analysis heterosis in Indian elite chickpea cultivars Theor. Appl. Genet. 98 1217 1225
35. K. Sharma I.K. Dawson R. Waugh 1995 Relationships among cultivated and wild lentils revealed by RAPD analysis Theor. Appl. Genet. 91 647 654
36. S.K. Sharma M.R. Knox T.H.N. Ellis 1996 AFLP analysis of the diversity and phylogeny of Lensits comparison with RAPD analysis Theor. Appl. Genet. 93 751 758
37. P.W. Skroch J. Nienhuis 1995 Qualitative and quantitative characterization of RAPD variation among snap bean (Phaseolus vulgaris) genotypes Theor. Appl. Genet. 91 1078 1085
38. Smith S. and Chin E. 1992. The utility of random primer-mediated profiles, RFLP's, and other technologies to provide useful data for varietal protection. In: Applications of RAPD Technology to Plant Breeding. Proceedings of the Symposium (1992; Minneapolis, Minnesota), Crop Science Society of AmericaAmerican Society for Horticultural Scienceand American Genetics Association, Madison, Wisconsin, pp. 46-49.
39. 1 grain yieldheterosis and RFLPs Theor. Appl. Genet. 80 833 840
40. G. Sonnante D. Pignone 2001 Assessment of genetic variation in a collection of lentil using molecular tools Euphytica 120 301 307
41. G. Sonnante I. Galasso D. Pignone 2003 ITS sequence analysis and phylogenetic inference in the genus Lens Mill Ann. Bot. 91 49 54
42. R.R. Sokal C.D. Michener 1958 A statistical method for evaluating systematic relationships Univ. Kansas Sci. Bull. 38 1409 1438
43. S.D. Tanksley 1983 Molecular markers in plant breeding Plant Mol. Biol. Rep. 1 1 3 8
44. C.E. Thorman M.E. Ferreira L.E.A. Camargo J.G. Tivang T.C. Osborn 1994 Comparison of RFLP and RAPD markers to estimating genetic relationships within and among cruciferous species Theor. Appl. Genet. 88 973 980
45. S.V. Tingey J.P. del Tufo 1993 Genetic analysis with random amplified polimorphic DNA markers Plant Physiol. 101 349 352
46. A.M. Torres N.F. Weeden A. Martin 1993 Linkage among isozymeRFLP and RAPD markers in Vicia faba Theor. Appl. Genet. 85 937 945
47. United Nations Statistics Division 2003. Http: //unstats.un.org/unsd/ comtrade/ce/.
48. W.E. Weber G. Wricke 1994 Genetic Markers in Plant Breeding Paul Parey Scientific Publishers Berlin and Hamburg 2 6
49. N.F. Weeden G.M. Timmerman J. Lu 1994 Identifying and mapping genes of economic significance Euphytica 73 191 198
50. Weeden N.F., Timmerman G.F., Hemmat M., Kneen B.E. and Lodhi M.A. 1992. Inheritance of reliability of RAPD markers. In: Applications of RAPD Markers to Plant Breeding. Crop Sci. Soc. Am., pp. 12-17.
51. K.H. Weising W.K. Nybom W. Meyer 1995 DNA fingerprintings in plants and fungi CRC Press Inc Boca Raton, Florida 1 200
52. J.G.K. Williams A.R. Kubelik K.J. Livak J.A. Rafalski S.V. Tingey 1990 DNA polymorphisms amplified by arbitrary primers are useful as genetic markers Nucleic Acids Res. 18 6531 6535
53. Z. Yu L. Li-Qiong L. Huan B. Jie Y. Man-Ye M. Chen C. Ying-Fan Q. Xiao-Lin C. Fang 2002 RAPD markers in diversity detection and variety identification of Tibetan Hulless barley Plant Mol. Biol. Rep. 20 369 377