Assessing genetic diversity in indigenous Veneto chicken breeds using AFLP markers

Animal Genetics

Volumn 37, Issue 2, 2006, Pages 101-105

  De Marchi, M ^a   Dalvit, C ^a   Targhetta, C ^a   Cassandro, M ^a  

^a UNIVERSITY OF PADOVA   (Italy)

Author keywords

Amplified fragment length polymorphism; Breed; Genetic distance; Genetic diversity; Indigenous chicken

Indexed keywords

ANIMAL; ARTICLE; BREEDING; CHICKEN; CLASSIFICATION; CLUSTER ANALYSIS; GENETIC MARKER; GENETIC POLYMORPHISM; GENETICS; HETEROZYGOTE; ITALY; MALE;

ANIMALS; BREEDING; CHICKENS; CLUSTER ANALYSIS; GENETIC MARKERS; HETEROZYGOTE; ITALY; MALE; POLYMORPHISM, GENETIC;

EID: 33645233526     PISSN: 02689146     EISSN: 13652052     Source Type: Journal    
DOI: 10.1111/j.1365-2052.2005.01390.x     Document Type: Article

References (29)

1. TM markers for DNA fingerprinting in cattle. Animal Genetics 28 418 26.
2. TM markers. Zootecnica e Nutrizione Animale 25 107 16.
3. TM markers. Animal Genetics 32 281 8.
4. Ajmone-Marsan P. Negrini R. Milanesi E. Bozzi R. Nijman I.J. Buntjer J.B. Valentini A. Lenstra A. 2002 Genetic distances within and across cattle breeds as indicated by biallelic AFLP makers. Animal Genetics 33 280 6.
5. Barcaccia G. Albertini E. Falcinelli M. 1999 AFLP fingerprinting in Pelargonium peltatum: its development and potential in cultivar identification. Journal of Horticultural Science & Biotechnology 74 243 50.
6. Capua I. Mutinelli F. Pozza M.D. Donatelli I. Puzelli S. Cancellotti F.M. 2002 The 1999-2000 avian influenza (H7N1) epidemic in Italy: veterinary and human health implications. Acta Tropica 83 7 11.
7. Cassandro M. De Marchi M. Targhetta C. Dalvit C. Ramanzin M. Baruchello M. 2004 An In Situ Markers Assisted Conservation Scheme of 11 Italian Avian Breeds. Book of Abstracts of the 55th Annual Meeting of the European Association for Animal Production. Bled, Slovenia, 5-9 September
8. Cavalli-Sforza L.L. Edwards A.W.F. 1967 Phylogenetic analysis: models and estimation procedures. Evolution 32 550 70.
9. De Marchi M. Targhetta C. Contiero B. Cassandro M. 2003 Genetic traceability of chicken breeds. Agriculturae Conspectus Scientificus 68 255 9.
10. De Marchi M. Cassandro M. Lunardi. Siegel P.B. 2005a q7 Carcass characteristics and qualitative meat traits of the Padovana breed of chicken. International Journal of Poultry Science 4 233 8.
11. De Marchi M. Cassandro M. Targhetta C. Baruchello M. Notter D.R. 2005b q8 Conservation of poultry genetic resource in the Veneto region of Italy. Animal Genetic Resource (in press).
12. Felsenstein J. 2004 PHYLIP (Phylogeny Inference Package) version 3.6. Distributed by the author. Department of Genome Sciences University of Washington, Seattle.
13. Herbergs J. Siwek M. Crooijmans R.P.M.A. Groenen M.A.M. Van der Poel J.J. 1999 Multicolour fluorescent detection and mapping of AFLP markers in chicken (Gallus domesticus). Animal Genetics 30 274 85.
14. Jones C.J. Edwards K.J. Castiglione S. et al. 1997 Reproducibility testing of RAPD, AFLP and SSR markers in plants by a network of European laboratories. Molecular Breeding 3 381 90.
15. Knorr C. Cheng H.H. Dogson J.B. 1999 Application of AFLP markers to genome mapping in poultry. Animal Genetics 30 28 35.
16. Mock K.E. Theimer T.C. Rhodes O.E. Jr.. Greenberg D.L. Keim P. 2002 Genetic variation across the historical range of the wild turkey (Meleagris Gallopavo). Molecular Ecology 11 643 57.
17. Nei M. 1972 Genetic distance between populations. American Naturalist 106 283 92.
18. Nei M. 1973 Analysis of gene diversity in subdived population. Proceedings of the National Academy of Sciences of the United States of America 70 3321 3.
19. Nei M. 1978 Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89 583 90.
20. Nei M. Tajima F. Tateno Y. 1983 Accuracy of estimated phylogenetic threes from molecular data II, Gene frequency data. Journal of Molecular Evolution 19 153 70.
21. Oldenbroek J.K. 1999 Introduction. In: Genebank and the Conservation of Farm Animal Genetic Resources Ed. by Oldenbroek J.K. pp. 1 9. DLO Institute for Animal Science and Health Lelystad, The Netherlands.
22. Ota T. 1993 DISPAN. Institute of Molecular Evolutionary Genetics Pennsylvania State University.
23. Òvilo C. Cervera M.T. Castellanos C. Martinez-Zapater J.M. 2000 Characterization of Iberian pig genotypes using AFLP markers. Animal Genetics 31 117 22.
24. Plastow G. Siggens M. Bagga M. Brugmans B. Heuven H. Peleman J. 2003 Utilization of AFLP for genetic distance analysis in pigs. Archives Zootecniche 52 157 64.
25. Reynolds J. 1983 Estimation of the coancestry coefficient basis for a short-term genetic distance. Genetics 105 767 9.
26. SAS 1999 User's Guide: Basic, Version 8.00. Edition of SAS, Inst., Inc. Cary, NC, USA.
27. Semyenova S.K. Moiseev I.G. Vasil'ev V.A. Filenko A.L. Nikiforov A.A. Sevast'yanova A.A. Ryskov A.P. 2002 Genetic polymorphism of Russian, European, and Asian Chicken Breeds as revealed with DNA and protein markers. Russian Journal of Genetics 38 1109 12.
28. Vos P. Hogers R. Bleeker M. et al. 1995 AFLP: a new technique for DNA fingerprinting. Nucleic Acids Research 23 4407 14.
29. Yeh F.C. Yang R.-C. Boyle T. Timothy B.J. Ye Z.-H. Mao J.X. 1997 POPGENE, the User-friendly Shareware for Population Genetic Analysis. Molecular Biology and Biotechnology Centre, University of Alberta