Differentiation of faecal Escherichia coli from humans and animals by multiple antibiotic resistance analysis

Letters in Applied Microbiology

Volumn 42, Issue 1, 2006, Pages 71-77

  Vantarakis, A ^a   Venieri, D ^b   Komninou, G ^b   Papapetropoulou, M ^b  

^a DEMOCRITUS UNIVERSITY OF THRACE MEDICAL SCHOOL   (Greece)

^b UNIVERSITY OF PATRAS   (Greece)

Author keywords

Antimicrobial; Cluster; Discriminant; Pattern; Pollution; Source

Indexed keywords

ANTIBIOTICS; CLUSTER ANALYSIS; DISCRIMINANT ANALYSIS; ESCHERICHIA COLI; HEALTH RISKS; HIERARCHICAL SYSTEMS; PRINCIPAL COMPONENT ANALYSIS;

ANTIBIOTIC RESISTANCE ANALYSES (ARA); ANTIBIOTICS RESISTANCE; ANTIMICROBIAL; CLUSTER; DISCRIMINANT; FAECAL SAMPLES; FECAL POLLUTION; MULTIPLE ANTIBIOTIC RESISTANCES; PATTERN; SOURCE;

ANIMALS;

AMIKACIN; AMOXICILLIN; AMPICILLIN; CEFALOTIN; CHLORAMPHENICOL; GENTAMICIN; NALIDIXIC ACID; NEOMYCIN; NITROFURANTOIN; NORFLOXACIN; OXYTETRACYCLINE; SULFATHIAZOLE; TETRACYCLINE;

ANTIBIOTICS; DIFFUSION; ESCHERICHIA COLI; HEALTH CARE; POLLUTION; PRINCIPAL COMPONENT ANALYSIS; RISKS; STATISTICAL METHODS;

ANTIBIOTIC RESISTANCE;

ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIUM CONTAMINATION; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATE; CATTLE; CLASSIFICATION; CLUSTER ANALYSIS; COMPARATIVE STUDY; DISCRIMINANT ANALYSIS; DISK DIFFUSION METHOD; ENVIRONMENTAL SAMPLE; ESCHERICHIA COLI; FECES MICROFLORA; GOAT; HUMAN; MICROBIOLOGICAL EXAMINATION; MULTIDRUG RESISTANCE; MULTIPLE ANTIBIOTIC RESISTANCE; NONHUMAN; POLLUTION; PRINCIPAL COMPONENT ANALYSIS; PUBLIC HEALTH; RISK ASSESSMENT; SAMPLE; SHEEP;

ANIMALIA; BACTERIA (MICROORGANISMS); BOS TAURUS; CAPRA HIRCUS; ESCHERICHIA COLI; OVIS ARIES;

EID: 33645229631     PISSN: 02668254     EISSN: 1472765X     Source Type: Journal    
DOI: 10.1111/j.1472-765X.2005.01803.x     Document Type: Article

References (24)

1. Chee-Sanford J.C. Aminov R.I. Krapac I.J. Garrigues-Jeanjean N. Mackie R.I. 2001 Occurrence and diversity of tetracycline resistance genes in lagoons and groundwater underlying two swine production facilities. Appl Environ Microbiol 67 1494 1502.
2. Galland J.C. Hyatt D.R. Crupper S.S. Acheson D.W. 2001 Prevalence, antibiotic susceptibility and diversity of Escherichia coli O157:H7 isolates from a longitudinal study of beef cattle feedlots. Appl Environ Microbiol 67 1619 1627.
3. Geornaras I. Hastings J.W. Von Holy A. 2001 Genotypic analysis of Escherichia coli strains from poultry carcasses and their susceptibilities to antimicrobial agents. Appl Environ Microbiol 67 1940 1944.
4. Goñi-Urriza M. Capdepuy M. Arpin C. Raymond N. Caumette P. Quentin C. 2000 Impact of an urban effluent on antibiotic resistance of riverine Enterobacteriaceae and Aeromonas spp. Appl Environ Microbiol 66 125 132.
5. Gonzalo M.P. Ariibas R.M. Latorre E. Baquero F. Martinez J.L. 1989 Sewage dilution and loss of antibiotic resistance and virulence determinants in E. coli. FEMS Microbiol Lett 59 93 96.
6. Graves A.K. Hagedorn C. Teetor A. Mahal M. Booth A.M. Reneau R.B. Jr. 2002 Antibiotic resistance profiles to determine sources of fecal contamination in a rural Virginia Watershed. J Environ Qual 31 1300 1308.
7. Guan S. Xu R. Odumeru J. Gyles C. 2002 Development of a procedure for discriminating among Escherichia coli isolates from animals and human sources. Appl Environ Microbiol 68 2690 2698.
8. Hagedorn C. Robinson S.L. Filtz J.R. Grubbs S.M. Angier T.A. Reneau R.B. Jr. 1999 Determining sources of fecal pollution in a rural Virginia Watershed with antibiotic resistance patterns in fecal streptococci. Appl Environ Microbiol 65 5522 5531.
9. Harwood V.J. Whitlock J. Withington V. 2000 Classification of antibiotic resistance patterns of indicator bacteria by discriminant analysis: use in predicting the source of fecal contamination in subtropical waters. Appl Environ Microbiol 66 3698 3704.
10. Kaspar C.W. Burgess J.L. Knight I.T. Colwell R.R. 1990 Antibiotic resistance indexing Escherichia coli to identify sources of fecal contamination in water. Can J Microbiol 36 891 894.
11. Khan A. Das S.C. Ramamurthy T. Sikdar A. Khanam J. Yamasaki S. Takeda Y. BalakrishNair G. 2002 Antibiotic resistance, virulence gene, and molecular profiles of Shiga toxin-producing Escherichia coli isolates from diverse sources in Calcutta, India. J Clin Microbiol 40 2009 2015.
12. Mathew A.G. Saxton A.M. Upchurch W.G. Chattin S.E. 1999 Multiple antibiotic resistance patterns of Escherichia coli isolates from swine farms. Appl Environ Microbiol 65 2770 2772.
13. Miller R.A. Walker R.D. Baya A. Clemens K. Coles M. Hawke J.P. Henricson B.E. Hsu H.M. Oaks J.L. Papapetropoulou M. Reimschuessel R. 2003 Antimicrobial susceptibility testing of aquatic bacteria: quality control disk diffusion ranges for Escherichia coli ATCC 25922 and Aeromonas salmonicida subsp. salmonicida ATCC 33658 at 22 and 28°C. J Clin Microbiol 41 4318 4323.
14. National committee for clinical laboratory standards (NCCLS) 2001 Development of in vitro susceptibility testing criteria and quality control parameters. Approved guideline M23-A2. National committee for clinical laboratory standards Wayne, Pa.
15. National committee for clinical laboratory standards (NCCLS) 2002 Performance standards for antimicrobial disk and dilution susceptibility tests for bacteria isolated from animals. Approved standard M31-A2. National committee for clinical laboratory standards Wayne, Pa.
16. Oppegaard H. Steinum T.M. Wasteson Y. 2001 Horizontal transfer of a multi-drug resistance plasmid between coliform bacteria of human and bovine origin in a farm environment. Appl Environ Microbiol 67 3732 3734.
17. Parveen S. Murphree R.L. Edmiston L. Kaspar C.W. Portier K.M. Tamplin M.L. 1997 Association of multiple-antibiotic-resistance profiles with point and nonpoint sources of Escherichia coli in Apalachicola Bay. Appl Environ Microbiol 63 2607 2612.
18. Parveen S. Portier K.M. Robinson K. Edmiston L. Tamplin M.L. 1999 Discriminant analysis of ribotype profiles of Escherichia coli for differentiating human and nonhuman sources of fecal pollution. Appl Environ Microbiol 65 3142 3147.
19. Parveen S. Hodge N.C. Stall R.E. Farrah S.R. Tamplin M.L. 2001 Phenotypic and genotypic characterization of human and nonhuman Escherichia coli. Water Res 2 379 386.
20. Souza V. Rocha M. Valera A. Eguiarte L.E. 1999 Genetic structure of natural populations of Escherichia coli in wild hosts on different continents. Appl Environ Microbiol 65 3373 3385.
21. Stefani S. 2000 Molecular epidemiology of antibiotic resistance. Int J Antimicrob Agents 13 143 153.
22. Van den Bogaard A.E. Stobberingh E.E. 2000 Epidemiology of resistance to antibiotics links between animals and humans. Int J Antimicrob Agents 14 327 335.
23. Wiggins B.A. 1996 Discriminant analysis of antibiotic resistance patterns in fecal streptococci, a method to differentiate human and animal sources of fecal pollution in natural waters. Appl Environ Microbiol 62 3997 4002.
24. Wiggins B.A. Andrews R.A. Conway R.A. Corr C.L. Dobratz E.J. Dougherty D.P. Eppard J.R. Knupp S.R. et al. 1999 Use of antibiotic resistance analysis to identify nonpoint sources of fecal pollution. Appl Environ Microbiol 65 3483 3486.