Single gene retrieval from thermally degraded DNA

Journal of Biosciences

Volumn 30, Issue 5, 2005, Pages 599-604

  Zhang, Lianwen ^a   Wu, Qingyu ^a  

^a TSINGHUA UNIVERSITY   (China)

Author keywords

DNA thermal degradation; Polymerase chain reaction (PCR) amplification; Single gene retrieval; Singlet oxygen

Indexed keywords

CELL DNA; ESTER DERIVATIVE; GENOMIC DNA; ISOBENZOFURAN DERIVATIVE; OXYGEN; REACTIVE OXYGEN METABOLITE; SINGLET OXYGEN;

POLYMERASE CHAIN REACTION;

ARTICLE; CONTROLLED STUDY; DNA CLEAVAGE; DNA DEGRADATION; DNA ISOLATION; GENE AMPLIFICATION; HEAT; HEATING; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; TEMPERATURE DEPENDENCE;

AIR; DNA; ELECTROPHORESIS, AGAR GEL; GENES; HEAT; NITROGEN; POLYMERASE CHAIN REACTION; REACTIVE OXYGEN SPECIES; SYNECHOCOCCUS; TIME FACTORS;

EID: 33645022465     PISSN: 02505991     EISSN: 02505991     Source Type: Journal    
DOI: 10.1007/BF02703559     Document Type: Article

References (21)

1. Bruskov V I, Malakhova L V, Masalimov Z K and Chernikov A V 2002 Heat-induced formation of reactive oxygen species and 8-oxoguanine, a biomarker of damage to DNA; Nucleic Acids Res. 30 1354-1363
2. Chalfoun D J and Tuross N 1999 Botanical Remains: Utility in Protein and DNA Research; Ancient Biomolecules 3 67-79
3. 2; Phys. Rev. Lett. 90 086403
4. 8) and their use in estimating paleotemperature; EPSL 176 107-116
5. Ewing D and Damasker K E 1995 Hydroxyl radicals and DNA double-strand breaks in X-irradiated Escherichia coli.; Biochem. Biophys. Res. Commun. 207 957-962
6. Foulger G R 1995 The hengill geothermal area, iceland: variation of temperature gradients deduced from the maximum depth of seimogenesis; J. Volc. Geotherm. Res. 65 119-133
7. Lagorio M G, Dicelio L E and San Román E A 1989 Quantum yield of singlet molecular oxygen sensitization by copper(II) tetracarboxyphthalocyanine; J. Photochem. Photobiol. B 3 615-624
8. Laight D W, Andrews T J, Haj-Yehia A I, Carrier M J and Änggård E E 1997 Microassy of superoxide anion scavenging activity in vitro; Environ. Toxicol. Pharmacol. 3 65-68
9. Lindahl T 1993 Instability and decay in the primary structure of DNA; Nature (London) 362 709-715
10. Lindal T and Nyberg B 1972 Rate of depurination of native deoxyribonucleic acid; Biochemistry 11 3610-3618
11. Matsuo S, Toyokuni S, Osaka M, Hamazaki S and Sugiyama T 1995 Degradation of DNA in dried tissues by atmospheric oxygen; Biochem. Biophys. Res. Commun. 208 1021-1027
12. Müller-Breitkreutz K, Mohr H, Briviba K and Sies H 1995 Inactivation of viruses by chemically and photochemically generated singlet molecular oxygen; J. Photochem. Photobiol. B 30 63-70
13. Poinar H, Kuch M, McDonald G, Martin P and Pääbo S 2003 Nuclear gene sequences from a late pleistoncene sloth coprolite; Curr. Biol. 13 1150-1152
14. Poinar H N, HÖss M, Bada J L and Pääbo S 1996 Amino acid racemization and the preservation of ancient DNA; Science 272 864-867
15. Reiners P W, Brady R, Farley K A, Fryxell J E, Wernicke B and Lux D 2000 Helium and argon thermochronometry of the Gold Butte block, south Virgin mountains, Nevada; EPSL 178 315-326
16. Sauer J, Schreiber U, Schmid R, Völker U and Forchhammer K 2001 Nitrogen starvation induced chlorosis in synechococcus PCC 7942, low-level photosynthesis as a mechanism of longterm survival; Plant Physiol. 126 233-243
17. Threadgold J and Brown T A 2003 Degradation of DNA in artificially charred wheat seeds; J. Archaeol. Sci. 30 1067-1076
18. Yang Y S, Sharma R, Sharma A, Awasthi S and Awasthi Y C 2003 Lipid peroxidation and cell cycle signaling: 4-hydroxynonenal, a key molecule in stress mediated signaling; Acta Biochim. Pol. 50 319-336
19. Young R H, Wehrly K and Martin R L 1971 Solvent effects in dye-sensitized photooxidation reactions; J. Am. Chem. Soc. 93 5774-5779
20. Zastawny T H, Altman S A, Randers-Eichhorn L, Madurawe R, Lumpkin J A, Dizdaroglu M and Rao G 1995 DNA-base modifications and membrane damage in cultured-mammaliancells treated with iron ions; Free Radical Biol. Med. 18 1013-1022
21. Zhang X S, Rosenstein B S, Wang Y, Lebwohl M and Wei H C 1997 Identification of possible reactive oxygen species involved in ultraviolet radiation induced oxidative DNA damage; Free Radical Biol. Med. 23 980-985