Sensing of inorganic carbon limitation in Synechococcus PCC7942 is correlated with the size of the internal inorganic carbon pool and involves oxygen

Plant Physiology

Volumn 139, Issue 4, 2005, Pages 1959-1969

  Woodger, Fiona J ^a   Badger, Murray R ^a   Price, G Dean ^a  

^a AUSTRALIAN NATIONAL UNIVERSITY   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

CARBON; CARBON DIOXIDE; GENES; INORGANIC CHEMICALS; OXYGEN;

CONCENTRATING MECHANISM (CCM); FRESHWATER CYANOBACTERIA; INORGANIC CARBON (CI);

BACTERIOLOGY;

BACTERIOLOGY; CARBON; GENES; INORGANIC COMPOUNDS;

CYANOBACTERIA; SYNECHOCOCCUS; SYNECHOCOCCUS ELONGATUS PCC 6301; SYNECHOCOCCUS SP.;

BACTERIAL DNA; CARBON; CARBON DIOXIDE; OXYGEN;

ACTIVE TRANSPORT; ARTICLE; BACTERIAL GENE; BIOLOGY; GENETICS; METABOLISM; MUTATION; NUCLEOTIDE SEQUENCE; RADIATION EXPOSURE; SYNECHOCOCCUS;

BASE SEQUENCE; BIOLOGICAL TRANSPORT, ACTIVE; CARBON; CARBON DIOXIDE; DNA, BACTERIAL; GENES, BACTERIAL; MUTATION; OXYGEN; PHOTOBIOLOGY; SYNECHOCOCCUS;

EID: 33644992198     PISSN: 00320889     EISSN: None     Source Type: Journal    
DOI: 10.1104/pp.105.069146     Document Type: Article

References (60)

1. Anthony JR., Warczak KL, Donuhue TJ (2005) A transcriptional response to singlet oxygen, a toxic byproduct of photosynthesis. Proc Natl Acad Sci USA 102: 6502-6507
2. Bader KP, Schmid GH (1989) Photosynthetic and respiratory oxygen gas-exchange measured by mass-spectrometry in the filamentous cyanobacterium Oscillatoria chalybea is dependent on the nitrogen-source in the growth-medium. Biochim Biophys Acta 974: 303-310
3. 3 fluxes in cyanobacteria and microalgae during steady-state photosynthesis. Physiol Plant 90: 529-536
4. 2 concentrating mechanisms in cyanobacteria: molecular components, their diversity and evolution. J Exp Bot 54: 609-622
5. Badger MR, Schreiber U (1993) Effects of inorganic carbon accumulation on photosynthetic oxygen reduction and cyclic electron flow in the cyanobacterium Synechococcus PCC7942. Photosynth Res 37: 177-191
6. Badger MR, von Caemmerer S, Ruuska S, Nakano H (2000) Electron flow to oxygen in higher plants and algae: rates and control of direct photoreduction (Mehler reaction) and rubisco oxygenase. Philos Trans R Soc Lond B Biol Sci 355: 1433-1445
7. Cai Y, Wolk CP (1990) Use of a conditionally lethal gene in Anabaena sp. strain PCC 7120 to select for double recombinants and to entrap insertion sequences. J Bacteriol 172: 3138-3145
8. Cann MJ (2004) Signalling through cyclic nucleotide monophosphates in cyanobacteria. New Phytol 161: 23-34
9. Chen Y, Cann MJ, Litvin TN, Iougenko V, Sinclair ML, Levin LR, Buck J (2000) Soluble adenylyl cyclase as an evolutionary conserved bicarbonate sensor. Science 289: 625-628
10. Codd GA, Stewart WDP (1973) Pathways of glycollate metabolism in bluegreen-alga Anabaena cylindrica. Arch Mikrobiol 94: 11-28
11. Domain F, Houot L, Chauvat F, Cassier-Chauvat C (2004) Function and regulation of the cyanobacterial genes lexA, recA and ruvB: LexA is critical to the survival of cells facing inorganic carbon starvation. Mol Microbiol 53: 65-80
12. Dubbs P, Dubbs JM, Tabita FR (2004) Effector-mediated interaction of CbbR(I) and CbbR(II) regulators with target sequences in Rhodobacter capsulatus. J Bacteriol 186: 8026-8035
13. Dzelzkalns VA, Owens GC, Bugorad L (1984) Chloroplast promoter driven expression of the chloramphenicol acetyl transferase gene in a cyanobacterium. Nucleic Acids Res 12: 8917-8925
14. Figge RM, Cassier-Chauvat C, Chauvat F, Cerff R (2001) Characterization and analysis of an NAD(P)H dehydrogenase transcriptional regulator critical for the survival of cyanobacteria facing inorganic carbon starvation and osmotic stress. Mol Microbiol 39: 455-468
15. Forchhammer K (2004) Global carbon/nitrogen control by P-II signal transduction in cyanobacteria: from signals to targets. FEMS Microbiol Rev 28: 319-333
16. Franklin LA, Badger MR (2001) A comparison of photosynthetic electron transport rates in macroalgae measured by pulse amplitude modulated chlorophyll fluorometry and mass spectrometry. J Phycol 37: 756-767
17. Hagemann M, Vinnemeier J, Oberpichler I, Boldt R, Bauwe H (2005) The glycine decarboxylase complex is not essential for the cyanobacterium Synechocystis sp. strain PCC 6803. Plant Biol 7: 15-22
18. 3 concentration, oxygen concentration and light-intensity. Plant Cell Physiol 14: 235-291
19. 2 in cyanobacteria. Curr Biol 13: 230-235
20. Hihara Y, Kamei A, Kanehisa M, Kaplan A, Ikeuchi M (2001) DNA microarray analysis of cyanobacterial gene expression during acclimation to high light. Plant Cell 13: 793-806
21. Huang L, McCluskey MP, Ni H, LaRossa RA (2002) Global gene expression profiles of the cyanobacterium Synechocystis sp. strain PCC 6803 in response to irradiation with UV-B and white light. J Bacteriol 184: 6845-6858
22. 2 concentrating mechanisms in photosynthetic microorganisms. Annu Rev Plant Physiol Plant Mol Biol 50: 539-570
23. 2 uptake in Synechococcus sp. PCC7002 gives evidence for multiple NDH-1 complexes with specific roles in cyanobacteria. Mol Microbiol 32: 1305-1315
24. 2 accumulation and assimilation in air-grown cells of Synechococcus UTEX 625. Can J Bot 75: 274-283
25. 2 photoreduction in air-grown cells of the cyanobacterium Synechococcus UTEX 625. Can J Bot 75: 946-954
26. Liu WH, Saint DA (2002) A new quantitative method of real time reverse transcription polymerase chain reaction assay based on simulation of polymerase chain reaction kinetics. Anal Biochem 302: 52-59
27. Ludwig M, Sultemeyer D, Price GD (2000) Isolation of ccm KLMN genes from the marine cyanobacterium, Synechococcus sp. PCC7002 (Cyanobacteria), and evidence that CcmM is essential for carboxysome assembly. J Phycol 36: 1109-1118
28. 2 hydration in the cyanobacterium, Synechococcus sp. PCC7942. Mol Microbiol 43: 425-435
29. Marcus Y, Berry JA, Pierce J (1992) Photosynthesis and photorespiration in a mutant of the cyanobacterium Synechocystis PCC 6803 lacking carboxysomes. Planta 187: 511-516
30. 2 concentration in their environment. Plant Physiol 71: 203-210
31. Mazouni K, Domain F, Chauvat F, Cassier-Chauvat C (2003) Expression and regulation of the crucial plant-like ferredoxin of cyanobacteria. Mol Microbiol 49: 1019-1029
32. 2-inducible transcripts involved in the CO2-concentrating mechanism in Synechocystis sp. PCC6803. Plant Cell Environ 27: 615-626
33. 2-concentrating mechanism in the cyanobacterium Synechocystis sp. strain PCC6803. Plant Physiol 132: 218-229
34. 2 photoreduction by the cyanobacterium Synechococcus UTEX 625. Plant Physiol 88: 6-9
35. Miller AG, Espie GS, Canvin DT (1991) The effects of inorganic carbon and oxygen on fluorescence in the cyanobacterium Synechococcus UTEX 625. Can J Bot 69: 1151-1160
36. Mori S, Castoreno A, Lammers PJ (2002) Transcript levels of rbcR1, ntcA, and rbcL/S genes in cyanobacterium Anabaena sp. PCC 7120 are down-regulated in response to cold and osmotic stress. FEMS Microbiol Lett 213: 167-173
37. Ohkawa H, Pakrasi HB, Ogawa T (2000a) Two types of functionally distinct NAD(P)H dehydrogenases in Synechocystis sp. strain PCC6803. J Biol Chem 275: 31630-31634
38. 3 uptake in Synechocystis sp. strain PCC 6803. J Bacteriol 182: 2591-2596
39. 2-concentrating mechanism in cyanobacteria. Can J Bot 76: 1035-1042
40. 2-induced activation of the bicarbonate transporter operon in cyanobacteria. J Bacteriol 183: 1891-1898
41. Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T (1999) Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942. Proc Natl Acad Sci USA 96: 13571-13576
42. 2 uptake in the cyanobacterium Synechococcus PCC7942 without apparent inhibition of internal carbonic anhydrase activity. Plant Physiol 89: 37-43
43. 2 concentrating mechanism. Plant Physiol 91: 505-513
44. Price GD, Howitt SM, Harrison K, Badger MR (1993) Analysis of a genomic DNA region from the cyanobacterium Synechococcus sp. strain PCC7942 involved in carboxysome assembly and function. J Bacteriol 175: 2871-2879
45. Price GD, Maeda S, Omata T, Badger MR (2002) Modes of active inorganic carbon uptake in the cyanobacterium Synechococcus sp. PCC7942. Funct Plant Biol 29: 131-149
46. Price GD, Woodger FJ, Badger MR, Howitt SM, Tucker L (2004) Identification of a SulP-type bicarbonate transporter in marine cyanobacteria. Proc Natl Acad Sci USA 101: 18228-18233
47. Renstrom E, Bergman B (1989) Glycolate metabolism in cyanobacteria. 1. Glycolate excretion and phosphoglycolate phosphatase activity. Physiol Plant 75: 137-143
48. Renstrom E, Rai AN, Bergman B (1989) Glycolate metabolism in cyanobacteria. 2. Evidence for a mediated transport of glycolate in Anabaena PCC7120. Physiol Plant 75: 144-150
49. Schonbaum GR, Bonner WD, Storey BT, Bahr JT (1971) Specific inhibition of cyanide-insensitive respiratory pathway in plant mitochondria by hydroxamic acids. Plant Physiol 47: 124-128
50. Schwarz R, Reinhold L, Kaplan A (1995) Low activation state of ribulose-1,5-bisphosphate carboxylase oxygenase in carboxysome-defective Synechococcus mutants. Plant Physiol 108: 183-190
51. Shibata M, Katoh H, Sonoda M, Ohkawa H, Shimoyama M, Fukuzawa H, Kaplan A, Ogawa T (2002) Genes essential to sodium-dependent bicarbonate transport in cyanobacteria: function and phylogenetic analysis. J Biol Chem 277: 18658-18664
52. 2 uptake systems in cyanobacteria: genes involved and their phylogenetic relationship with homologous genes in other organisms. Proc Natl Acad Sci USA 98: 11739-11794
53. Sicher RC (1984) Glycolaldehyde inhibition of photosynthetic carbon assimilation by isolated chloroplasts and protoplasts. In C Sybesma, ed, Advances in Photosynthetic Research, Vol 3. Martinus Nijhoff, The Hague, pp 413-416
54. Sültemeyer D, Amoroso G, Fock H (1995) Induction of intracellular carbonic anhydrases during the adaptation to low inorganic carbon concentrations in wild-type and ca-1 mutant cells of Chlamydomonas reinhardtii. Planta 196: 217-224
55. 2 and high-light conditions. Mol Microbiol 52: 837-845
56. Talling JF (1985) Inorganic carbon reserves of natural waters and ecophysiological consequences of their photosynthetic depletion: microalgae. In WJ Berry ed, Inorganic Carbon Uptake by Aquatic Photosynthetic Organisms. American Society of Plant Physiologists, Rockville, MD, pp 403-420
57. Wang HL, Postier BL, Burnap RL (2004) Alterations in global patterns of gene expression in Synechocystis sp. PCC 6803 in response to inorganic carbon limitation and the inactivation of ndhR, a LysR family regulator. J Biol Chem 279: 5739-5751
58. 2 photoreduction which protects nitrogenase activity in the cyanobacterium Synechococcus sp. RF-1. Photosynth Res 82: 151-164
59. 2-concentrating mechanism in Synechococcus sp. PCC7942 through a redox-independent pathway. Plant Physiol 133: 2069-2080
60. 2/HCOJapanese source3 -responsive soluble adenylyl cyclase as a putative metabolic sensor. Trends Endocrinol Metab 12: 366-370